RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 PSIP1O75475 530 aaKnown RBP15.12■□□□□ 0.01
SHMT2-202ENST00000414700 GSTM1P09488 218 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 ZCCHC18P0CG32 403 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 GFAPP14136 432 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 BDKRB1P46663 353 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 CLCNKAP51800 687 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 GSTM4Q03013 218 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 KRT72Q14CN4 511 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 ANGPT1Q15389 498 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 ZXDCQ2QGD7 858 aaPredicted RBP15.12■□□□□ 0.01
SHMT2-202ENST00000414700 LIPMQ5VYY2 423 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 PTGR2Q8N8N7 351 aaPredicted RBP15.12■□□□□ 0.01
SHMT2-202ENST00000414700 OR6Y1Q8NGX8 325 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 ECSITQ9BQ95 431 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 GATA5Q9BWX5 397 aaPredicted RBP15.12■□□□□ 0.01
SHMT2-202ENST00000414700 SLC12A9Q9BXP2 914 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 ZDHHC5Q9C0B5 715 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 WWP1Q9H0M0 922 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 PRDM8Q9NQV8 689 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 GALNT8Q9NY28 637 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 CD274Q9NZQ7 290 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 OARD1Q9Y530 152 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 DGKBQ9Y6T7 804 aa15.12■□□□□ 0.01
SHMT2-202ENST00000414700 SYCE1LA8MT33 242 aa15.11■□□□□ 0.01
SHMT2-202ENST00000414700 ITM2AO43736 263 aa15.11■□□□□ 0.01
SHMT2-202ENST00000414700 SNX2O60749 519 aa15.11■□□□□ 0.01
SHMT2-202ENST00000414700 LYPLA1O75608 230 aaPredicted RBP15.11■□□□□ 0.01
SHMT2-202ENST00000414700 SP9P0CG40 484 aa15.11■□□□□ 0.01
SHMT2-202ENST00000414700 RPIAP49247 311 aa15.11■□□□□ 0.01
SHMT2-202ENST00000414700 RAP1GDS1P52306 607 aa15.11■□□□□ 0.01
SHMT2-202ENST00000414700 WDR45BQ5MNZ6 344 aa15.11■□□□□ 0.01
SHMT2-202ENST00000414700 SH2D4BQ5SQS7 431 aa15.11■□□□□ 0.01
SHMT2-202ENST00000414700 LYSMD4Q5XG99 296 aa15.11■□□□□ 0.01
SHMT2-202ENST00000414700 DUS1LQ6P1R4 473 aaKnown RBP15.11■□□□□ 0.01
SHMT2-202ENST00000414700 IZUMO2Q6UXV1 221 aa15.11■□□□□ 0.01
SHMT2-202ENST00000414700 RINLQ6ZS11 566 aa15.11■□□□□ 0.01
SHMT2-202ENST00000414700 PDZD3Q86UT5 571 aa15.11■□□□□ 0.01
SHMT2-202ENST00000414700 PARGQ86W56 976 aa15.11■□□□□ 0.01
SHMT2-202ENST00000414700 NRROSQ86YC3 692 aa15.11■□□□□ 0.01
SHMT2-202ENST00000414700 NRTNQ99748 197 aa15.11■□□□□ 0.01
SHMT2-202ENST00000414700 PARVBQ9HBI1 364 aa15.11■□□□□ 0.01
SHMT2-202ENST00000414700 DNAJC28Q9NX36 388 aa15.11■□□□□ 0.01
SHMT2-202ENST00000414700 TBC1D29Q9UFV1 150 aa15.11■□□□□ 0.01
SHMT2-202ENST00000414700 MID2Q9UJV3 735 aa15.11■□□□□ 0.01
SHMT2-202ENST00000414700 GOLGA4Q13439 2230 aaKnown RBP15.11■□□□□ 0.01
SHMT2-202ENST00000414700 OR52A4PA6NMU1 304 aa15.1■□□□□ 0.01
SHMT2-202ENST00000414700 C8GP07360 202 aa15.1■□□□□ 0.01
SHMT2-202ENST00000414700 PRKAA2P54646 552 aa15.1■□□□□ 0.01
SHMT2-202ENST00000414700 RPA4Q13156 261 aa15.1■□□□□ 0.01
SHMT2-202ENST00000414700 CLCA4Q14CN2 919 aa15.1■□□□□ 0.01
SHMT2-202ENST00000414700 FAM219BQ5XKK7 198 aa15.1■□□□□ 0.01
SHMT2-202ENST00000414700 FBXO39Q8N4B4 442 aa15.1■□□□□ 0.01
SHMT2-202ENST00000414700 RFWD2Q8NHY2 731 aa15.1■□□□□ 0.01
SHMT2-202ENST00000414700 SCHIP1Q9P0W5 487 aaPredicted RBP15.1■□□□□ 0.01
SHMT2-202ENST00000414700 PRAMEF33A0A0G2JMD5 474 aa15.1■□□□□ 0.01
SHMT2-202ENST00000414700 KLK8O60259 260 aa15.1■□□□□ 0.01
SHMT2-202ENST00000414700 C1orf105O95561 183 aa15.1■□□□□ 0.01
SHMT2-202ENST00000414700 PABPC4LP0CB38 370 aaKnown RBP15.1■□□□□ 0.01
SHMT2-202ENST00000414700 VCLP18206 1134 aa15.1■□□□□ 0.01
SHMT2-202ENST00000414700 ACTR1BP42025 376 aa15.1■□□□□ 0.01
SHMT2-202ENST00000414700 ACTR1AP61163 376 aa15.1■□□□□ 0.01
SHMT2-202ENST00000414700 NFKB2Q00653 900 aa15.1■□□□□ 0.01
SHMT2-202ENST00000414700 PLOD1Q02809 727 aaPredicted RBP15.1■□□□□ 0.01
SHMT2-202ENST00000414700 C1orf61Q13536 156 aa15.1■□□□□ 0.01
SHMT2-202ENST00000414700 MAP7Q14244 749 aa15.1■□□□□ 0.01
SHMT2-202ENST00000414700 IQCHQ86VS3 1027 aa15.1■□□□□ 0.01
SHMT2-202ENST00000414700 SFTPA2Q8IWL1 248 aa15.1■□□□□ 0.01
SHMT2-202ENST00000414700 PHACTR4Q8IZ21 702 aa15.1■□□□□ 0.01
SHMT2-202ENST00000414700 CCNYL1Q8N7R7 359 aa15.1■□□□□ 0.01
SHMT2-202ENST00000414700 LMNTD1Q8N9Z9 388 aa15.1■□□□□ 0.01
SHMT2-202ENST00000414700 OR5AR1Q8NGP9 310 aa15.1■□□□□ 0.01
SHMT2-202ENST00000414700 PPP1R14CQ8TAE6 165 aa15.1■□□□□ 0.01
SHMT2-202ENST00000414700 SKA1Q96BD8 255 aa15.1■□□□□ 0.01
SHMT2-202ENST00000414700 NSUN5Q96P11 429 aaKnown RBP15.1■□□□□ 0.01
SHMT2-202ENST00000414700 EGFL8Q99944 293 aa15.1■□□□□ 0.01
SHMT2-202ENST00000414700 TRNAU1APQ9NX07 287 aaKnown RBP15.1■□□□□ 0.01
SHMT2-202ENST00000414700 ARL15Q9NXU5 204 aa15.1■□□□□ 0.01
SHMT2-202ENST00000414700 HEY2Q9UBP5 337 aa15.1■□□□□ 0.01
SHMT2-202ENST00000414700 PDZK1P1A8MUH7 402 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 TNFRSF10AO00220 468 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 TAPBPO15533 448 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 TNFP01375 233 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 CHRNGP07510 517 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 SLC35G4P0C7Q5 338 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 ESRRAP11474 423 aaPredicted RBP15.09■□□□□ 0.01
SHMT2-202ENST00000414700 ANPEPP15144 967 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 JUNDP17535 347 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 TSPAN8P19075 237 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 PGM1P36871 562 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 GDF5P43026 501 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 AFF3P51826 1226 aaKnown RBP15.09■□□□□ 0.01
SHMT2-202ENST00000414700 SP140Q13342 867 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 PRRT3Q5FWE3 981 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 ZNF678Q5SXM1 525 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 ACAD11Q709F0 780 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 PDPRQ8NCN5 879 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 ZBTB44Q8NCP5 570 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 FAM174AQ8TBP5 190 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 TFGQ92734 400 aaPredicted RBP15.09■□□□□ 0.01
SHMT2-202ENST00000414700 RHBDF1Q96CC6 855 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms