RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 CACNA2D3Q8IZS8 1091 aa14.22□□□□□ -0.13
CHD1-202ENST00000414220 CD200R1Q8TD46 325 aa14.22□□□□□ -0.13
CHD1-202ENST00000414220 MCOLN3Q8TDD5 553 aa14.22□□□□□ -0.13
CHD1-202ENST00000414220 ELMO2Q96JJ3 720 aa14.22□□□□□ -0.13
CHD1-202ENST00000414220 HIST1H2AHQ96KK5 128 aa14.22□□□□□ -0.13
CHD1-202ENST00000414220 TRAPPC9Q96Q05 1148 aa14.22□□□□□ -0.13
CHD1-202ENST00000414220 OR2A14Q96R47 310 aa14.22□□□□□ -0.13
CHD1-202ENST00000414220 HIST1H2AJQ99878 128 aa14.22□□□□□ -0.13
CHD1-202ENST00000414220 H2AFJQ9BTM1 129 aa14.22□□□□□ -0.13
CHD1-202ENST00000414220 TRIM54Q9BYV2 358 aa14.22□□□□□ -0.13
CHD1-202ENST00000414220 APMAPQ9HDC9 416 aa14.22□□□□□ -0.13
CHD1-202ENST00000414220 UTP6Q9NYH9 597 aaKnown RBP14.22□□□□□ -0.13
CHD1-202ENST00000414220 GALPQ9UBC7 116 aa14.22□□□□□ -0.13
CHD1-202ENST00000414220 TMEM184BQ9Y519 407 aaPredicted RBP14.22□□□□□ -0.13
CHD1-202ENST00000414220 ACACAQ13085 2346 aa14.21□□□□□ -0.13
CHD1-202ENST00000414220 SLC16A5O15375 505 aa14.21□□□□□ -0.13
CHD1-202ENST00000414220 SYF2O95926 243 aaKnown RBP14.21□□□□□ -0.13
CHD1-202ENST00000414220 C8GP07360 202 aa14.21□□□□□ -0.13
CHD1-202ENST00000414220 MSL3P1P0C860 447 aa14.21□□□□□ -0.13
CHD1-202ENST00000414220 FOLR1P15328 257 aa14.21□□□□□ -0.13
CHD1-202ENST00000414220 MCM3P25205 808 aa14.21□□□□□ -0.13
CHD1-202ENST00000414220 GABRB3P28472 473 aa14.21□□□□□ -0.13
CHD1-202ENST00000414220 OAS2P29728 719 aaKnown RBP14.21□□□□□ -0.13
CHD1-202ENST00000414220 SSTR1P30872 391 aa14.21□□□□□ -0.13
CHD1-202ENST00000414220 PHBP35232 272 aa14.21□□□□□ -0.13
CHD1-202ENST00000414220 CXADRP78310 365 aa14.21□□□□□ -0.13
CHD1-202ENST00000414220 CUL1Q13616 776 aa14.21□□□□□ -0.13
CHD1-202ENST00000414220 C6orf15Q6UXA7 325 aaPredicted RBP14.21□□□□□ -0.13
CHD1-202ENST00000414220 UBE2R2Q712K3 238 aaPredicted RBP14.21□□□□□ -0.13
CHD1-202ENST00000414220 TMEM126BQ8IUX1 230 aa14.21□□□□□ -0.13
CHD1-202ENST00000414220 C19orf47Q8N9M1 422 aaKnown RBP14.21□□□□□ -0.13
CHD1-202ENST00000414220 FBXO15Q8NCQ5 510 aaPredicted RBP14.21□□□□□ -0.13
CHD1-202ENST00000414220 HMGCLL1Q8TB92 370 aa14.21□□□□□ -0.13
CHD1-202ENST00000414220 CPNE1Q99829 537 aa14.21□□□□□ -0.13
CHD1-202ENST00000414220 CHRNA10Q9GZZ6 450 aa14.21□□□□□ -0.13
CHD1-202ENST00000414220 LHX6Q9UPM6 363 aa14.21□□□□□ -0.13
CHD1-202ENST00000414220 KIF26BQ2KJY2 2108 aa14.21□□□□□ -0.13
CHD1-202ENST00000414220 IGF2RP11717 2491 aa14.2□□□□□ -0.14
CHD1-202ENST00000414220 MAP1BP46821 2468 aaKnown RBP14.2□□□□□ -0.14
CHD1-202ENST00000414220 MYO1CO00159 1063 aa14.2□□□□□ -0.14
CHD1-202ENST00000414220 KIAA0754O94854 1291 aa14.2□□□□□ -0.14
CHD1-202ENST00000414220 CCNDBP1O95273 360 aa14.2□□□□□ -0.14
CHD1-202ENST00000414220 F7P08709 466 aaPredicted RBP14.2□□□□□ -0.14
CHD1-202ENST00000414220 HBQ1P09105 142 aa14.2□□□□□ -0.14
CHD1-202ENST00000414220 TPBGLP0DKB5 382 aa14.2□□□□□ -0.14
CHD1-202ENST00000414220 ST6GAL1P15907 406 aa14.2□□□□□ -0.14
CHD1-202ENST00000414220 SAT1P21673 171 aa14.2□□□□□ -0.14
CHD1-202ENST00000414220 VAC14Q08AM6 782 aa14.2□□□□□ -0.14
CHD1-202ENST00000414220 ABHD18Q0P651 414 aa14.2□□□□□ -0.14
CHD1-202ENST00000414220 SP140Q13342 867 aa14.2□□□□□ -0.14
CHD1-202ENST00000414220 GRB7Q14451 532 aa14.2□□□□□ -0.14
CHD1-202ENST00000414220 KCNAB1Q14722 419 aa14.2□□□□□ -0.14
CHD1-202ENST00000414220 TGIF1Q15583 401 aa14.2□□□□□ -0.14
CHD1-202ENST00000414220 ZC3H12BQ5HYM0 836 aaKnown RBP14.2□□□□□ -0.14
CHD1-202ENST00000414220 FBXO38Q6PIJ6 1188 aa14.2□□□□□ -0.14
CHD1-202ENST00000414220 PAQR3Q6TCH7 311 aa14.2□□□□□ -0.14
CHD1-202ENST00000414220 GPR155Q7Z3F1 870 aa14.2□□□□□ -0.14
CHD1-202ENST00000414220 CTAGE3PQ8IX95 158 aa14.2□□□□□ -0.14
CHD1-202ENST00000414220 NKAPQ8N5F7 415 aaKnown RBP14.2□□□□□ -0.14
CHD1-202ENST00000414220 C2orf73Q8N5S3 287 aaPredicted RBP14.2□□□□□ -0.14
CHD1-202ENST00000414220 ASB11Q8WXH4 323 aa14.2□□□□□ -0.14
CHD1-202ENST00000414220 IFT81Q8WYA0 676 aa14.2□□□□□ -0.14
CHD1-202ENST00000414220 SMPDL3AQ92484 453 aa14.2□□□□□ -0.14
CHD1-202ENST00000414220 SEC14L1Q92503 715 aa14.2□□□□□ -0.14
CHD1-202ENST00000414220 NKD1Q969G9 470 aa14.2□□□□□ -0.14
CHD1-202ENST00000414220 ZUFSPQ96AP4 578 aa14.2□□□□□ -0.14
CHD1-202ENST00000414220 TSPAN17Q96FV3 270 aa14.2□□□□□ -0.14
CHD1-202ENST00000414220 IL17FQ96PD4 163 aa14.2□□□□□ -0.14
CHD1-202ENST00000414220 SLC30A3Q99726 388 aa14.2□□□□□ -0.14
CHD1-202ENST00000414220 WDR83Q9BRX9 315 aaKnown RBP14.2□□□□□ -0.14
CHD1-202ENST00000414220 RHOJQ9H4E5 214 aa14.2□□□□□ -0.14
CHD1-202ENST00000414220 IRAK4Q9NWZ3 460 aa14.2□□□□□ -0.14
CHD1-202ENST00000414220 SPHK1Q9NYA1 384 aa14.2□□□□□ -0.14
CHD1-202ENST00000414220 CIDEBQ9UHD4 219 aa14.2□□□□□ -0.14
CHD1-202ENST00000414220 PILRAQ9UKJ1 303 aa14.2□□□□□ -0.14
CHD1-202ENST00000414220 PADI1Q9ULC6 663 aa14.2□□□□□ -0.14
CHD1-202ENST00000414220 RUVBL2Q9Y230 463 aaKnown RBP14.2□□□□□ -0.14
CHD1-202ENST00000414220 APC2O95996 2303 aa14.19□□□□□ -0.14
CHD1-202ENST00000414220 FAM95CA0A1B0GW59 222 aa14.19□□□□□ -0.14
CHD1-202ENST00000414220 TCRBV9S1A1TA0A576 114 aa14.19□□□□□ -0.14
CHD1-202ENST00000414220 ESYT3A0FGR9 886 aa14.19□□□□□ -0.14
CHD1-202ENST00000414220 ARHGEF33A8MVX0 844 aa14.19□□□□□ -0.14
CHD1-202ENST00000414220 TMEM150CB9EJG8 249 aa14.19□□□□□ -0.14
CHD1-202ENST00000414220 E7EQ34 232 aa14.19□□□□□ -0.14
CHD1-202ENST00000414220 GFYI3L273 518 aa14.19□□□□□ -0.14
CHD1-202ENST00000414220 CPNE3O75131 537 aaKnown RBP14.19□□□□□ -0.14
CHD1-202ENST00000414220 SCRG1O75711 98 aa14.19□□□□□ -0.14
CHD1-202ENST00000414220 KLK3P07288 261 aaPredicted RBP14.19□□□□□ -0.14
CHD1-202ENST00000414220 FDXRP22570 491 aa14.19□□□□□ -0.14
CHD1-202ENST00000414220 CMPK1P30085 196 aa14.19□□□□□ -0.14
CHD1-202ENST00000414220 RPA3P35244 121 aaPredicted RBP14.19□□□□□ -0.14
CHD1-202ENST00000414220 GP5P40197 560 aa14.19□□□□□ -0.14
CHD1-202ENST00000414220 NAB1Q13506 487 aa14.19□□□□□ -0.14
CHD1-202ENST00000414220 TSTA3Q13630 321 aaPredicted RBP14.19□□□□□ -0.14
CHD1-202ENST00000414220 GPR19Q15760 415 aa14.19□□□□□ -0.14
CHD1-202ENST00000414220 CYP2A13Q16696 494 aa14.19□□□□□ -0.14
CHD1-202ENST00000414220 RBM20Q5T481 1227 aaKnown RBP14.19□□□□□ -0.14
CHD1-202ENST00000414220 ZDHHC24Q6UX98 284 aa14.19□□□□□ -0.14
CHD1-202ENST00000414220 TAX1BP1Q86VP1 789 aa14.19□□□□□ -0.14
CHD1-202ENST00000414220 ZC3HC1Q86WB0 502 aaKnown RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms