RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 TMEM199Q8N511 208 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 OXR1Q8N573 874 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 FRMD1Q8N878 549 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 ZNF610Q8N9Z0 462 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 TMEM35BQ8NCS4 154 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 METTL6Q8TCB7 284 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 TOP1MTQ969P6 601 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 FAM149B1Q96BN6 582 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 PLEKHA8Q96JA3 519 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 ZNF597Q96LX8 424 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 CNTNAP3BQ96NU0 1288 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 PGLYRP2Q96PD5 576 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 MCEEQ96PE7 176 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 LMF1Q96S06 567 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 CNTNAP3Q9BZ76 1288 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 GPR61Q9BZJ8 451 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 CLK4Q9HAZ1 481 aaKnown RBP9.19□□□□□ -0.94
SNHG3-201ENST00000413987 GID8Q9NWU2 228 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 ADAM28Q9UKQ2 775 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 HSF4Q9ULV5 492 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 TSC22D4Q9Y3Q8 395 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 TCRBV7S3A2A0A539 114 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 ISM1B1AKI9 464 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 K7ERQ8 282 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 SLC22A2O15244 555 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 RRP8O43159 456 aaKnown RBP9.19□□□□□ -0.94
SNHG3-201ENST00000413987 KCNK5O95279 499 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 MMP2P08253 660 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 KRT7P08729 469 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 NUDT7P0C024 238 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 LCP1P13796 627 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 TCF4P15884 667 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 MRPS22P82650 360 aaKnown RBP9.19□□□□□ -0.94
SNHG3-201ENST00000413987 OGDHQ02218 1023 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 SCN1BQ07699 218 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 GK3PQ14409 553 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 MOGQ16653 247 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 RAB6CQ53S08 254 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 C9orf152Q5JTZ5 239 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 TIGD7Q6NT04 549 aaPredicted RBP9.19□□□□□ -0.94
SNHG3-201ENST00000413987 DCUN1D2Q6PH85 259 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 PRSS55Q6UWB4 352 aaPredicted RBP9.19□□□□□ -0.94
SNHG3-201ENST00000413987 LCLAT1Q6UWP7 414 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 RSPO2Q6UXX9 243 aaPredicted RBP9.19□□□□□ -0.94
SNHG3-201ENST00000413987 GPRIN1Q7Z2K8 1008 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 UNC93AQ86WB7 457 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 CENPSQ8N2Z9 138 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 TTC9BQ8N6N2 239 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 KYQ8NBH2 561 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 JOSD2Q8TAC2 188 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 ADAMTS16Q8TE57 1224 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 ISOC1Q96CN7 298 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 C1orf159Q96HA4 380 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 SUSD3Q96L08 255 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 HHIPQ96QV1 700 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 OLFM1Q99784 485 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 NEURL2Q9BR09 285 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 MED10Q9BTT4 135 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 VN1R3Q9BXE9 311 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 RAB6CQ9H0N0 254 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 RIBC2Q9H4K1 309 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 CWH43Q9H720 699 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 MRPL40Q9NQ50 206 aaKnown RBP9.19□□□□□ -0.94
SNHG3-201ENST00000413987 NDUFAF4Q9P032 175 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 GAB2Q9UQC2 676 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 B3GNT3Q9Y2A9 372 aa9.19□□□□□ -0.94
SNHG3-201ENST00000413987 MFSD2BA6NFX1 497 aa9.18□□□□□ -0.94
SNHG3-201ENST00000413987 M0QZQ0 153 aa9.18□□□□□ -0.94
SNHG3-201ENST00000413987 SOCS6O14544 535 aa9.18□□□□□ -0.94
SNHG3-201ENST00000413987 MED7O43513 233 aa9.18□□□□□ -0.94
SNHG3-201ENST00000413987 CST8O60676 142 aa9.18□□□□□ -0.94
SNHG3-201ENST00000413987 CNOT3O75175 753 aaKnown RBP9.18□□□□□ -0.94
SNHG3-201ENST00000413987 GLRA3O75311 464 aa9.18□□□□□ -0.94
SNHG3-201ENST00000413987 OTCP00480 354 aa9.18□□□□□ -0.94
SNHG3-201ENST00000413987 GGT5P36269 586 aa9.18□□□□□ -0.94
SNHG3-201ENST00000413987 NDUFV1P49821 464 aa9.18□□□□□ -0.94
SNHG3-201ENST00000413987 SLC5A3P53794 718 aa9.18□□□□□ -0.94
SNHG3-201ENST00000413987 KLF10Q13118 480 aa9.18□□□□□ -0.94
SNHG3-201ENST00000413987 USP10Q14694 798 aaKnown RBP9.18□□□□□ -0.94
SNHG3-201ENST00000413987 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.18□□□□□ -0.94
SNHG3-201ENST00000413987 LINC01559Q495D7 138 aa9.18□□□□□ -0.94
SNHG3-201ENST00000413987 SDHAF4Q5VUM1 108 aa9.18□□□□□ -0.94
SNHG3-201ENST00000413987 DNAJC24Q6P3W2 148 aa9.18□□□□□ -0.94
SNHG3-201ENST00000413987 PAOXQ6QHF9 649 aa9.18□□□□□ -0.94
SNHG3-201ENST00000413987 ZNF704Q6ZNC4 412 aaPredicted RBP9.18□□□□□ -0.94
SNHG3-201ENST00000413987 FAM183BPQ6ZVS7 135 aa9.18□□□□□ -0.94
SNHG3-201ENST00000413987 CARM1Q86X55 608 aa9.18□□□□□ -0.94
SNHG3-201ENST00000413987 ZDHHC17Q8IUH5 632 aa9.18□□□□□ -0.94
SNHG3-201ENST00000413987 CLVS1Q8IUQ0 354 aaPredicted RBP9.18□□□□□ -0.94
SNHG3-201ENST00000413987 CRYBG2Q8N1P7 616 aa9.18□□□□□ -0.94
SNHG3-201ENST00000413987 MPP5Q8N3R9 675 aa9.18□□□□□ -0.94
SNHG3-201ENST00000413987 OR8K5Q8NH50 307 aa9.18□□□□□ -0.94
SNHG3-201ENST00000413987 STK35Q8TDR2 534 aa9.18□□□□□ -0.94
SNHG3-201ENST00000413987 PDCD6IPQ8WUM4 868 aaKnown RBP9.18□□□□□ -0.94
SNHG3-201ENST00000413987 MYLPFQ96A32 169 aa9.18□□□□□ -0.94
SNHG3-201ENST00000413987 SLC22A18Q96BI1 424 aa9.18□□□□□ -0.94
SNHG3-201ENST00000413987 MRPL38Q96DV4 380 aaKnown RBP9.18□□□□□ -0.94
SNHG3-201ENST00000413987 PTCHD1Q96NR3 888 aa9.18□□□□□ -0.94
SNHG3-201ENST00000413987 PKP2Q99959 881 aa9.18□□□□□ -0.94
SNHG3-201ENST00000413987 MRPL37Q9BZE1 423 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms