RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 PRDM8Q9NQV8 689 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 IMP3Q9NV31 184 aaKnown RBP6.46□□□□□ -1.38
VPS41-204ENST00000413141 DNAJC11Q9NVH1 559 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 SCHIP1Q9P0W5 487 aaPredicted RBP6.46□□□□□ -1.38
VPS41-204ENST00000413141 SPATA7Q9P0W8 599 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 HEY2Q9UBP5 337 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 TBC1D29Q9UFV1 150 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 TRPS1Q9UHF7 1281 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 PCOLCE2Q9UKZ9 415 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 PLAGL1Q9UM63 463 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 ANGPTL3Q9Y5C1 460 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 DNAJC15Q9Y5T4 150 aa6.46□□□□□ -1.38
VPS41-204ENST00000413141 GOLGA8QA0A0J9YX86 632 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 GOLGA8OA6NCC3 632 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 CCT8L1PA6NM43 557 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 OR52A4PA6NMU1 304 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 E7ENX8 843 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 E7EQ34 232 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 E9PBE3 544 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 GOLGA8NF8WBI6 632 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 SDHDO14521 159 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 FCHO1O14526 889 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 HGSO14964 777 aaPredicted RBP6.45□□□□□ -1.38
VPS41-204ENST00000413141 PIP5K1BO14986 540 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 KLHL41O60662 606 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 CRCPO75575 148 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 EML2O95834 649 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 CHEK2O96017 543 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 TNFP01375 233 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 CAPN1P07384 714 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 EBLN1P0CF75 366 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 UROSP10746 265 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 NME1P15531 152 aaKnown RBP6.45□□□□□ -1.38
VPS41-204ENST00000413141 MAOBP27338 520 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 EPHA3P29320 983 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 PKLRP30613 574 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 HALP42357 657 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 PNLIPRP1P54315 467 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 NXPH1P58417 271 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 TAP2Q03519 686 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 CDC16Q13042 620 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 IFT88Q13099 833 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 NAE1Q13564 534 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 ARHGAP19Q14CB8 494 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 RPE65Q16518 533 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 GGTA1PQ4G0N0 100 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 XKR7Q5GH72 579 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 WDR45BQ5MNZ6 344 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 TCHHL1Q5QJ38 904 aaPredicted RBP6.45□□□□□ -1.38
VPS41-204ENST00000413141 CAPN13Q6MZZ7 669 aaPredicted RBP6.45□□□□□ -1.38
VPS41-204ENST00000413141 SLC30A9Q6PML9 568 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 ABRAXAS1Q6UWZ7 409 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 WASH2PQ6VEQ5 465 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 ACAD11Q709F0 780 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 ARMCX6Q7L4S7 300 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 EFL1Q7Z2Z2 1120 aaKnown RBP6.45□□□□□ -1.38
VPS41-204ENST00000413141 CLNKQ7Z7G1 428 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 MTDHQ86UE4 582 aaKnown RBP6.45□□□□□ -1.38
VPS41-204ENST00000413141 THOC6Q86W42 341 aaKnown RBP6.45□□□□□ -1.38
VPS41-204ENST00000413141 LONP2Q86WA8 852 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 C1orf210Q8IVY1 113 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 SYTL1Q8IYJ3 562 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 MAML2Q8IZL2 1156 aaPredicted RBP6.45□□□□□ -1.38
VPS41-204ENST00000413141 CHCHD4Q8N4Q1 142 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 FITM2Q8N6M3 262 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 CDYL2Q8N8U2 506 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 TMEM105Q8N8V8 129 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 PHC3Q8NDX5 983 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 C1orf216Q8TAB5 229 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 GPBAR1Q8TDU6 330 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 DNASE2BQ8WZ79 361 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 CCT6BQ92526 530 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 ATP6V1E2Q96A05 226 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 PRR11Q96HE9 360 aaPredicted RBP6.45□□□□□ -1.38
VPS41-204ENST00000413141 RILPQ96NA2 401 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 IL17FQ96PD4 163 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 LRRC37BQ96QE4 947 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 OR4K3Q96R72 315 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 OR52B2Q96RD2 323 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 CCDC28BQ9BUN5 200 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 NTMT1Q9BV86 223 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 LRRC61Q9BV99 259 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 SGPP1Q9BX95 441 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 GSDMCQ9BYG8 508 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 SLC29A3Q9BZD2 475 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 NMUR2Q9GZQ4 415 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 MIR1-1HGQ9H1L0 117 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 MYLK2Q9H1R3 596 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 TUBB1Q9H4B7 451 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 WDR55Q9H6Y2 383 aaPredicted RBP6.45□□□□□ -1.38
VPS41-204ENST00000413141 MVB12BQ9H7P6 319 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 CAAP1Q9H8G2 361 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 ACTR8Q9H981 624 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 WASH6PQ9NQA3 447 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 TCF7L2Q9NQB0 619 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 CCDC177Q9NQR7 707 aaPredicted RBP6.45□□□□□ -1.38
VPS41-204ENST00000413141 INTS7Q9NVH2 962 aaKnown RBP6.45□□□□□ -1.38
VPS41-204ENST00000413141 GPRC5BQ9NZH0 403 aa6.45□□□□□ -1.38
VPS41-204ENST00000413141 APOBEC3BQ9UH17 382 aaKnown RBP6.45□□□□□ -1.38
VPS41-204ENST00000413141 KLF15Q9UIH9 416 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms