RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 TCAIMQ8N3R3 496 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 C2orf73Q8N5S3 287 aaPredicted RBP8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 OR5AR1Q8NGP9 310 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 OR9A1PQ8NGU1 263 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 HM13Q8TCT9 377 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 MCUR1Q96AQ8 359 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 SCARF2Q96GP6 870 aaPredicted RBP8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 ZNF514Q96K75 400 aaPredicted RBP8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 GUCD1Q96NT3 240 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 UHRF1Q96T88 793 aaPredicted RBP8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 INSM2Q96T92 566 aaPredicted RBP8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 MYOCQ99972 504 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 MENTQ9BUN1 341 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 BRINP2Q9C0B6 783 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 BTBD1Q9H0C5 482 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 SPNS1Q9H2V7 528 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 MMADHCQ9H3L0 296 aaPredicted RBP8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 ACTR8Q9H981 624 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 EFCAB1Q9HAE3 211 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 ITM2CQ9NQX7 267 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 SLC2A4RGQ9NR83 387 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 SLAMF8Q9P0V8 285 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 NDRG2Q9UN36 371 aaKnown RBP8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 SLC17A4Q9Y2C5 497 aa8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 DNMT3AQ9Y6K1 912 aaPredicted RBP8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 LAMA2P24043 3122 aaKnown RBP8.38□□□□□ -1.07
HMGN1P34-201ENST00000413023 CKAP5Q14008 2032 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 TCRBV21S2A2A0A5A6 115 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 SERTM1A2A2V5 107 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 C19orf67A6NJJ6 358 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 E7EQ34 232 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 H0Y8X5 98 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 SLC28A1O00337 649 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 NRP2O60462 931 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 ULK1O75385 1050 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 ETHE1O95571 254 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 CATP04040 527 aaKnown RBP8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 JUPP14923 745 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 GLULP15104 373 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 XRCC1P18887 633 aaPredicted RBP8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 GNAZP19086 355 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 MAP4P27816 1152 aaKnown RBP8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 ARL1P40616 181 aaPredicted RBP8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 THOP1P52888 689 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 MTTPP55157 894 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 PSME3P61289 254 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 ERVK-8P63133 956 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 PHC1P78364 1004 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 TAP2Q03519 686 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 GRIK2Q13002 908 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 PRKG2Q13237 762 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 TDGQ13569 410 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 GTF2H3Q13889 308 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 E2F2Q14209 437 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 SF1Q15637 639 aaKnown RBP8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 SNCBQ16143 134 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 MAP7D1Q3KQU3 841 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 LEXMQ3ZCV2 418 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 GGTA1PQ4G0N0 100 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 PDCD4Q53EL6 469 aaKnown RBP8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 EOGTQ5NDL2 527 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 CATSPEREQ5SY80 951 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 KIAA1161Q6NSJ0 714 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 DUS1LQ6P1R4 473 aaKnown RBP8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 CYP20A1Q6UW02 462 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 KIAA1324Q6UXG2 1013 aaKnown RBP8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 USP30Q70CQ3 517 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 NET1Q7Z628 596 aaPredicted RBP8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 LRRTM4Q86VH4 590 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 MYLK4Q86YV6 388 aaPredicted RBP8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 PGAM4Q8N0Y7 254 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 FBXW8Q8N3Y1 598 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 OXR1Q8N573 874 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 RNF148Q8N7C7 305 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 ENDOVQ8N8Q3 282 aaKnown RBP8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 FAM156AQ8NDB6 213 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 FLCNQ8NFG4 579 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 WDR20Q8TBZ3 569 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 NRG4Q8WWG1 115 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 ASB12Q8WXK4 309 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 OR1E3Q8WZA6 343 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 VPS33AQ96AX1 596 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 APIPQ96GX9 242 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 GAS2L1Q99501 681 aaPredicted RBP8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 GPATCH1Q9BRR8 931 aaKnown RBP8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 SGPP1Q9BX95 441 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 SLC29A3Q9BZD2 475 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 ACPTQ9BZG2 426 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 TRIM8Q9BZR9 551 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 DPEP2Q9H4A9 486 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 WDR41Q9HAD4 459 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 PRDM6Q9NQX0 595 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 SCHIP1Q9P0W5 487 aaPredicted RBP8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 CD300AQ9UGN4 299 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 FZD4Q9ULV1 537 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 MMP17Q9ULZ9 603 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 POMPQ9Y244 141 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 DLGAP4Q9Y2H0 992 aa8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 CFAP20Q9Y6A4 193 aaKnown RBP8.37□□□□□ -1.07
HMGN1P34-201ENST00000413023 ATG2BQ96BY7 2078 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms