RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 EDN3P14138 238 aa16.05■□□□□ 0.16
MRPL55-220ENST00000411464 MAGP20916 626 aa16.05■□□□□ 0.16
MRPL55-220ENST00000411464 MSNP26038 577 aaKnown RBP16.05■□□□□ 0.16
MRPL55-220ENST00000411464 CTNNA1P35221 906 aaKnown RBP16.05■□□□□ 0.16
MRPL55-220ENST00000411464 ZNF169Q14929 603 aaPredicted RBP16.05■□□□□ 0.16
MRPL55-220ENST00000411464 TLR1Q15399 786 aa16.05■□□□□ 0.16
MRPL55-220ENST00000411464 SPA17Q15506 151 aa16.05■□□□□ 0.16
MRPL55-220ENST00000411464 KCTD11Q693B1 232 aa16.05■□□□□ 0.16
MRPL55-220ENST00000411464 IGFL2Q6UWQ7 119 aa16.05■□□□□ 0.16
MRPL55-220ENST00000411464 PACS1Q6VY07 963 aa16.05■□□□□ 0.16
MRPL55-220ENST00000411464 FAM20CQ8IXL6 584 aa16.05■□□□□ 0.16
MRPL55-220ENST00000411464 PARP9Q8IXQ6 854 aa16.05■□□□□ 0.16
MRPL55-220ENST00000411464 KLHDC8BQ8IXV7 354 aa16.05■□□□□ 0.16
MRPL55-220ENST00000411464 FAR1Q8WVX9 515 aa16.05■□□□□ 0.16
MRPL55-220ENST00000411464 LHPPQ9H008 270 aa16.05■□□□□ 0.16
MRPL55-220ENST00000411464 LRRC40Q9H9A6 602 aa16.05■□□□□ 0.16
MRPL55-220ENST00000411464 LUC7LQ9NQ29 371 aaKnown RBP16.05■□□□□ 0.16
MRPL55-220ENST00000411464 INTS7Q9NVH2 962 aaKnown RBP16.05■□□□□ 0.16
MRPL55-220ENST00000411464 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.05■□□□□ 0.16
MRPL55-220ENST00000411464 NXT1Q9UKK6 140 aaKnown RBP16.05■□□□□ 0.16
MRPL55-220ENST00000411464 TFR2Q9UP52 801 aa16.05■□□□□ 0.16
MRPL55-220ENST00000411464 KLHL20Q9Y2M5 609 aa16.05■□□□□ 0.16
MRPL55-220ENST00000411464 PCDHA13Q9Y5I0 950 aa16.05■□□□□ 0.16
MRPL55-220ENST00000411464 SOCS6O14544 535 aa16.04■□□□□ 0.16
MRPL55-220ENST00000411464 ALOX12BO75342 701 aa16.04■□□□□ 0.16
MRPL55-220ENST00000411464 PEBP1P30086 187 aaKnown RBP16.04■□□□□ 0.16
MRPL55-220ENST00000411464 PTPN7P35236 360 aa16.04■□□□□ 0.16
MRPL55-220ENST00000411464 RAB28P51157 221 aa16.04■□□□□ 0.16
MRPL55-220ENST00000411464 RWDD2BP57060 319 aa16.04■□□□□ 0.16
MRPL55-220ENST00000411464 NAA30Q147X3 362 aaPredicted RBP16.04■□□□□ 0.16
MRPL55-220ENST00000411464 GRM7Q14831 915 aa16.04■□□□□ 0.16
MRPL55-220ENST00000411464 ZRSR2Q15696 482 aaKnown RBP16.04■□□□□ 0.16
MRPL55-220ENST00000411464 NKG7Q16617 165 aa16.04■□□□□ 0.16
MRPL55-220ENST00000411464 DNAJC21Q5F1R6 531 aaKnown RBP16.04■□□□□ 0.16
MRPL55-220ENST00000411464 ZC3H12BQ5HYM0 836 aaKnown RBP16.04■□□□□ 0.16
MRPL55-220ENST00000411464 YOD1Q5VVQ6 348 aaPredicted RBP16.04■□□□□ 0.16
MRPL55-220ENST00000411464 B3GNTL1Q67FW5 361 aaPredicted RBP16.04■□□□□ 0.16
MRPL55-220ENST00000411464 KIRREL2Q6UWL6 708 aa16.04■□□□□ 0.16
MRPL55-220ENST00000411464 MARVELD3Q96A59 401 aa16.04■□□□□ 0.16
MRPL55-220ENST00000411464 TTC1Q99614 292 aa16.04■□□□□ 0.16
MRPL55-220ENST00000411464 SLC26A1Q9H2B4 701 aa16.04■□□□□ 0.16
MRPL55-220ENST00000411464 CUTCQ9NTM9 273 aa16.04■□□□□ 0.16
MRPL55-220ENST00000411464 PIH1D1Q9NWS0 290 aaKnown RBP16.04■□□□□ 0.16
MRPL55-220ENST00000411464 IMPACTQ9P2X3 320 aa16.04■□□□□ 0.16
MRPL55-220ENST00000411464 ENTPD4Q9Y227 616 aa16.04■□□□□ 0.16
MRPL55-220ENST00000411464 HS3ST3B1Q9Y662 390 aa16.04■□□□□ 0.16
MRPL55-220ENST00000411464 PIKFYVEQ9Y2I7 2098 aa16.03■□□□□ 0.16
MRPL55-220ENST00000411464 ARHGAP10A1A4S6 786 aa16.03■□□□□ 0.16
MRPL55-220ENST00000411464 MROH6A6NGR9 719 aa16.03■□□□□ 0.16
MRPL55-220ENST00000411464 DSCR3O14972 297 aa16.03■□□□□ 0.16
MRPL55-220ENST00000411464 PSMD3O43242 534 aa16.03■□□□□ 0.16
MRPL55-220ENST00000411464 ONECUT2O95948 504 aa16.03■□□□□ 0.16
MRPL55-220ENST00000411464 RPN2P04844 631 aa16.03■□□□□ 0.16
MRPL55-220ENST00000411464 PTMAP06454 111 aaKnown RBP16.03■□□□□ 0.16
MRPL55-220ENST00000411464 ITGAXP20702 1163 aa16.03■□□□□ 0.16
MRPL55-220ENST00000411464 PKLRP30613 574 aa16.03■□□□□ 0.16
MRPL55-220ENST00000411464 GRIA3P42263 894 aa16.03■□□□□ 0.16
MRPL55-220ENST00000411464 GCGRP47871 477 aa16.03■□□□□ 0.16
MRPL55-220ENST00000411464 CSE1LP55060 971 aaKnown RBP16.03■□□□□ 0.16
MRPL55-220ENST00000411464 NAP1L1P55209 391 aaKnown RBP16.03■□□□□ 0.16
MRPL55-220ENST00000411464 RBBP7Q16576 425 aa16.03■□□□□ 0.16
MRPL55-220ENST00000411464 TUBB8Q3ZCM7 444 aa16.03■□□□□ 0.16
MRPL55-220ENST00000411464 TCTE1Q5JU00 501 aa16.03■□□□□ 0.16
MRPL55-220ENST00000411464 FAM180AQ6UWF9 173 aa16.03■□□□□ 0.16
MRPL55-220ENST00000411464 SHISA6Q6ZSJ9 500 aa16.03■□□□□ 0.16
MRPL55-220ENST00000411464 C2orf73Q8N5S3 287 aaPredicted RBP16.03■□□□□ 0.16
MRPL55-220ENST00000411464 FAM71DQ8N9W8 422 aa16.03■□□□□ 0.16
MRPL55-220ENST00000411464 MOCOSQ96EN8 888 aa16.03■□□□□ 0.16
MRPL55-220ENST00000411464 THOC3Q96J01 351 aaKnown RBP16.03■□□□□ 0.16
MRPL55-220ENST00000411464 SPSB2Q99619 263 aa16.03■□□□□ 0.16
MRPL55-220ENST00000411464 SOX17Q9H6I2 414 aaPredicted RBP16.03■□□□□ 0.16
MRPL55-220ENST00000411464 SEMA3GQ9NS98 782 aa16.03■□□□□ 0.16
MRPL55-220ENST00000411464 IL1RAPL1Q9NZN1 696 aa16.03■□□□□ 0.16
MRPL55-220ENST00000411464 A0A1B0GUH1 482 aa16.02■□□□□ 0.16
MRPL55-220ENST00000411464 CCDC162PA2VCL2 907 aa16.02■□□□□ 0.16
MRPL55-220ENST00000411464 OR51F1A6NGY5 319 aa16.02■□□□□ 0.16
MRPL55-220ENST00000411464 E2F3O00716 465 aa16.02■□□□□ 0.16
MRPL55-220ENST00000411464 ZG16O60844 167 aa16.02■□□□□ 0.16
MRPL55-220ENST00000411464 METTL18O95568 372 aa16.02■□□□□ 0.16
MRPL55-220ENST00000411464 S1PR4O95977 384 aa16.02■□□□□ 0.16
MRPL55-220ENST00000411464 CD9P21926 228 aa16.02■□□□□ 0.16
MRPL55-220ENST00000411464 ELAVL4P26378 380 aaKnown RBP16.02■□□□□ 0.16
MRPL55-220ENST00000411464 HSPA14Q0VDF9 509 aa16.02■□□□□ 0.16
MRPL55-220ENST00000411464 SF1Q15637 639 aaKnown RBP16.02■□□□□ 0.16
MRPL55-220ENST00000411464 FAM214AQ32MH5 1076 aa16.02■□□□□ 0.16
MRPL55-220ENST00000411464 P3H1Q32P28 736 aa16.02■□□□□ 0.16
MRPL55-220ENST00000411464 SP5Q6BEB4 398 aaPredicted RBP16.02■□□□□ 0.16
MRPL55-220ENST00000411464 FCRL6Q6DN72 434 aa16.02■□□□□ 0.16
MRPL55-220ENST00000411464 ISLR2Q6UXK2 745 aa16.02■□□□□ 0.16
MRPL55-220ENST00000411464 CCDC170Q8IYT3 715 aa16.02■□□□□ 0.16
MRPL55-220ENST00000411464 TTC29Q8NA56 475 aaPredicted RBP16.02■□□□□ 0.16
MRPL55-220ENST00000411464 LINC01555Q8NAE3 123 aa16.02■□□□□ 0.16
MRPL55-220ENST00000411464 CFAP61Q8NHU2 1237 aa16.02■□□□□ 0.16
MRPL55-220ENST00000411464 ASZ1Q8WWH4 475 aa16.02■□□□□ 0.16
MRPL55-220ENST00000411464 CALR3Q96L12 384 aaKnown RBP16.02■□□□□ 0.16
MRPL55-220ENST00000411464 LMF1Q96S06 567 aa16.02■□□□□ 0.16
MRPL55-220ENST00000411464 SELENOSQ9BQE4 189 aa16.02■□□□□ 0.16
MRPL55-220ENST00000411464 TSSK1BQ9BXA7 367 aa16.02■□□□□ 0.16
MRPL55-220ENST00000411464 RUBCNLQ9H714 662 aa16.02■□□□□ 0.16
MRPL55-220ENST00000411464 GOLGA6L9A6NEM1 432 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms