RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 CCDC51Q96ER9 411 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 FAM81BQ96LP2 452 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 NECTIN4Q96NY8 510 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 ZNF559Q9BR84 538 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 MSTO1Q9BUK6 570 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 POLR1EQ9GZS1 481 aaKnown RBP4.72□□□□□ -1.65
LSM5-205ENST00000409952 HHATLQ9HCP6 504 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 DNAJC4Q9NNZ3 241 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 PALMDQ9NP74 551 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 SPAG4Q9NPE6 437 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 ZCCHC3Q9NUD5 404 aaKnown RBP4.72□□□□□ -1.65
LSM5-205ENST00000409952 RCC2Q9P258 522 aaKnown RBP4.72□□□□□ -1.65
LSM5-205ENST00000409952 CLIP2Q9UDT6 1046 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 PTBP2Q9UKA9 531 aaKnown RBP4.72□□□□□ -1.65
LSM5-205ENST00000409952 UTS2RQ9UKP6 389 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 SNX6Q9UNH7 406 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 PLA2G4CQ9UP65 541 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 MAST3O60307 1309 aa4.72□□□□□ -1.65
LSM5-205ENST00000409952 ZNF335Q9H4Z2 1342 aaPredicted RBP4.72□□□□□ -1.65
LSM5-205ENST00000409952 MACROD2A1Z1Q3 448 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 H0YIG0 161 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 SPINT2O43291 252 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 PRAF2O60831 178 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 RNF8O76064 485 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 ADCY5O95622 1261 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 ZNF18P17022 549 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 CYP2A7P20853 494 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 HNRNPA2B1P22626 353 aaKnown RBP4.71□□□□□ -1.66
LSM5-205ENST00000409952 GDI1P31150 447 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 CASQ1P31415 396 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 SLC6A12P48065 614 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 DHPSP49366 369 aaPredicted RBP4.71□□□□□ -1.66
LSM5-205ENST00000409952 CNN1P51911 297 aaKnown RBP4.71□□□□□ -1.66
LSM5-205ENST00000409952 MTTPP55157 894 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 TMPRSS3P57727 454 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 INHBEP58166 350 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 FOXM1Q08050 763 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 ABRQ12979 859 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 CUL2Q13617 745 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 DECR1Q16698 335 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 FAM153CQ494X1 144 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 LACTB2Q53H82 288 aaPredicted RBP4.71□□□□□ -1.66
LSM5-205ENST00000409952 SPATA46Q5T0L3 261 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 HECTD2Q5U5R9 776 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 ARHGAP11AQ6P4F7 1023 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 ZYG11AQ6WRX3 759 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 ZNF517Q6ZMY9 492 aaPredicted RBP4.71□□□□□ -1.66
LSM5-205ENST00000409952 VASH2Q86V25 355 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 ANKRD46Q86W74 232 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 ZC3HC1Q86WB0 502 aaKnown RBP4.71□□□□□ -1.66
LSM5-205ENST00000409952 SLC44A3Q8N4M1 653 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 RASGEF1AQ8N9B8 481 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 VANGL1Q8TAA9 524 aaPredicted RBP4.71□□□□□ -1.66
LSM5-205ENST00000409952 ARRDC2Q8TBH0 407 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 ACTRT2Q8TDY3 377 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 SELENOMQ8WWX9 145 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 TAAR8Q969N4 342 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 ORAI1Q96D31 301 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 LINGO1Q96FE5 620 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 ZNF582Q96NG8 517 aaPredicted RBP4.71□□□□□ -1.66
LSM5-205ENST00000409952 SPAG8Q99932 426 aaPredicted RBP4.71□□□□□ -1.66
LSM5-205ENST00000409952 DDX50Q9BQ39 737 aaKnown RBP4.71□□□□□ -1.66
LSM5-205ENST00000409952 TBCDQ9BTW9 1192 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 PUS3Q9BZE2 481 aaKnown RBP4.71□□□□□ -1.66
LSM5-205ENST00000409952 B3GNT4Q9C0J1 378 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 RAB33BQ9H082 229 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 UBQLN3Q9H347 655 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 SNX25Q9H3E2 840 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 GORASP2Q9H8Y8 452 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 IL17RBQ9NRM6 502 aa4.71□□□□□ -1.66
LSM5-205ENST00000409952 CAB39Q9Y376 341 aaPredicted RBP4.71□□□□□ -1.66
LSM5-205ENST00000409952 DDX49Q9Y6V7 483 aaKnown RBP4.71□□□□□ -1.66
LSM5-205ENST00000409952 HEG1Q9ULI3 1381 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 TRIM49BA6NDI0 452 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 C2CD4BA6NLJ0 364 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 C2orf81A6NN90 581 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 FAM90A26D6RGX4 464 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 KCNN4O15554 427 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 JTBO76095 146 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 IGHV2-70P01814 119 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 MMP10P09238 476 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 UGT1A1P22309 533 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 IL4RP24394 825 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 PIGAP37287 484 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 CDH12P55289 794 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 GSDMDP57764 484 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 GBE1Q04446 702 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 TROAPQ12815 778 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 TMED1Q13445 227 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 SNX1Q13596 522 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 CERKLQ49MI3 558 aaPredicted RBP4.7□□□□□ -1.66
LSM5-205ENST00000409952 DUS1LQ6P1R4 473 aaKnown RBP4.7□□□□□ -1.66
LSM5-205ENST00000409952 TMEM71Q6P5X7 295 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 BTNL8Q6UX41 500 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 DLK2Q6UY11 383 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 PATL1Q86TB9 770 aaKnown RBP4.7□□□□□ -1.66
LSM5-205ENST00000409952 ASPGQ86U10 573 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 MEX3DQ86XN8 651 aaKnown RBP4.7□□□□□ -1.66
LSM5-205ENST00000409952 NRROSQ86YC3 692 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 TMEM126BQ8IUX1 230 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms