RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 FAM71DQ8N9W8 422 aa4.49□□□□□ -1.69
SF3B1-202ENST00000409915 C12orf50Q8NA57 414 aaPredicted RBP4.49□□□□□ -1.69
SF3B1-202ENST00000409915 PDZD8Q8NEN9 1154 aa4.49□□□□□ -1.69
SF3B1-202ENST00000409915 OR7G1Q8NGA0 311 aa4.49□□□□□ -1.69
SF3B1-202ENST00000409915 BPIFB1Q8TDL5 484 aa4.49□□□□□ -1.69
SF3B1-202ENST00000409915 DUSP19Q8WTR2 217 aa4.49□□□□□ -1.69
SF3B1-202ENST00000409915 SLC35F5Q8WV83 523 aa4.49□□□□□ -1.69
SF3B1-202ENST00000409915 HMGB4Q8WW32 186 aa4.49□□□□□ -1.69
SF3B1-202ENST00000409915 OVCA2Q8WZ82 227 aa4.49□□□□□ -1.69
SF3B1-202ENST00000409915 SGCDQ92629 289 aa4.49□□□□□ -1.69
SF3B1-202ENST00000409915 PEX13Q92968 403 aa4.49□□□□□ -1.69
SF3B1-202ENST00000409915 FAM149B1Q96BN6 582 aa4.49□□□□□ -1.69
SF3B1-202ENST00000409915 SGF29Q96ES7 293 aa4.49□□□□□ -1.69
SF3B1-202ENST00000409915 TOE1Q96GM8 510 aaKnown RBP4.49□□□□□ -1.69
SF3B1-202ENST00000409915 PBKQ96KB5 322 aa4.49□□□□□ -1.69
SF3B1-202ENST00000409915 CEP295NLQ96MC4 621 aa4.49□□□□□ -1.69
SF3B1-202ENST00000409915 ZNF317Q96PQ6 595 aaPredicted RBP4.49□□□□□ -1.69
SF3B1-202ENST00000409915 CPXM1Q96SM3 734 aa4.49□□□□□ -1.69
SF3B1-202ENST00000409915 AIFM2Q9BRQ8 373 aa4.49□□□□□ -1.69
SF3B1-202ENST00000409915 TUBB6Q9BUF5 446 aa4.49□□□□□ -1.69
SF3B1-202ENST00000409915 SLC5A7Q9GZV3 580 aa4.49□□□□□ -1.69
SF3B1-202ENST00000409915 DPH5Q9H2P9 285 aa4.49□□□□□ -1.69
SF3B1-202ENST00000409915 LINC00597Q9H2U6 94 aa4.49□□□□□ -1.69
SF3B1-202ENST00000409915 MFSD1Q9H3U5 465 aa4.49□□□□□ -1.69
SF3B1-202ENST00000409915 FBXO44Q9H4M3 255 aa4.49□□□□□ -1.69
SF3B1-202ENST00000409915 EBF3Q9H4W6 596 aa4.49□□□□□ -1.69
SF3B1-202ENST00000409915 SLC32A1Q9H598 525 aa4.49□□□□□ -1.69
SF3B1-202ENST00000409915 FAM124BQ9H5Z6 455 aaPredicted RBP4.49□□□□□ -1.69
SF3B1-202ENST00000409915 CNOT10Q9H9A5 744 aaKnown RBP4.49□□□□□ -1.69
SF3B1-202ENST00000409915 UNKLQ9H9P5 680 aaKnown RBP4.49□□□□□ -1.69
SF3B1-202ENST00000409915 TBC1D17Q9HA65 648 aa4.49□□□□□ -1.69
SF3B1-202ENST00000409915 PLEKHA2Q9HB19 425 aa4.49□□□□□ -1.69
SF3B1-202ENST00000409915 TMBIM4Q9HC24 238 aa4.49□□□□□ -1.69
SF3B1-202ENST00000409915 ZBTB26Q9HCK0 441 aa4.49□□□□□ -1.69
SF3B1-202ENST00000409915 HPS4Q9NQG7 708 aa4.49□□□□□ -1.69
SF3B1-202ENST00000409915 SLC2A4RGQ9NR83 387 aa4.49□□□□□ -1.69
SF3B1-202ENST00000409915 TLR8Q9NR97 1041 aaKnown RBP4.49□□□□□ -1.69
SF3B1-202ENST00000409915 ETNK2Q9NVF9 386 aa4.49□□□□□ -1.69
SF3B1-202ENST00000409915 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.49□□□□□ -1.69
SF3B1-202ENST00000409915 POLR3BQ9NW08 1133 aaPredicted RBP4.49□□□□□ -1.69
SF3B1-202ENST00000409915 GIN1Q9NXP7 522 aa4.49□□□□□ -1.69
SF3B1-202ENST00000409915 GTSE1Q9NYZ3 720 aa4.49□□□□□ -1.69
SF3B1-202ENST00000409915 MYOTQ9UBF9 498 aa4.49□□□□□ -1.69
SF3B1-202ENST00000409915 ASH2LQ9UBL3 628 aa4.49□□□□□ -1.69
SF3B1-202ENST00000409915 NOCTQ9UK39 431 aaKnown RBP4.49□□□□□ -1.69
SF3B1-202ENST00000409915 PTBP2Q9UKA9 531 aaKnown RBP4.49□□□□□ -1.69
SF3B1-202ENST00000409915 SCML2Q9UQR0 700 aa4.49□□□□□ -1.69
SF3B1-202ENST00000409915 PTRH2Q9Y3E5 179 aaKnown RBP4.49□□□□□ -1.69
SF3B1-202ENST00000409915 HBS1LQ9Y450 684 aaKnown RBP4.49□□□□□ -1.69
SF3B1-202ENST00000409915 CAPN6Q9Y6Q1 641 aa4.49□□□□□ -1.69
SF3B1-202ENST00000409915 ZNF638Q14966 1978 aaKnown RBP4.49□□□□□ -1.69
SF3B1-202ENST00000409915 DENND4CQ5VZ89 1909 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 TICRRQ7Z2Z1 1910 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 ANAPC1Q9H1A4 1944 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 KIF26AQ9ULI4 1882 aaPredicted RBP4.48□□□□□ -1.69
SF3B1-202ENST00000409915 ARPC4-TTLL3A0A0A6YYG9 625 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.48□□□□□ -1.69
SF3B1-202ENST00000409915 LINC00854A0A1B0GVQ3 168 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 TRBC2A0A5B9 178 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 ANTXRLA6NF34 631 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 OR6C76A6NM76 312 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 FADS2P1A8MWK0 482 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 GPR89AB7ZAQ6 455 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 GOLGA8SH3BPF8 625 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 FBP2O00757 339 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 CHADO15335 359 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 PI15O43692 258 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 PRAMEF4O60810 478 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 ATP5HO75947 161 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 SEC14L2O76054 403 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 OR2C1O95371 312 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 TIAF1O95411 115 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 LY86O95711 162 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 APOEP02649 317 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 MPOP05164 745 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 FYNP06241 537 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 S100A6P06703 90 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 GRPP07492 148 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 GPR89BP0CG08 455 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 RALAP11233 206 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 CHRNB2P17787 502 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 CDH2P19022 906 aaPredicted RBP4.48□□□□□ -1.69
SF3B1-202ENST00000409915 PRKACBP22694 351 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 AVPR2P30518 371 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 VHLP40337 213 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 PBX1P40424 430 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 CASP3P42574 277 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 SLC15A1P46059 708 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 CPA2P48052 419 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 PPP3CCP48454 512 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 YPEL5P62699 121 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 ARF5P84085 180 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 NIPAL4Q0D2K0 466 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 TBL3Q12788 808 aaKnown RBP4.48□□□□□ -1.69
SF3B1-202ENST00000409915 TMEM115Q12893 351 aaPredicted RBP4.48□□□□□ -1.69
SF3B1-202ENST00000409915 LMAN2Q12907 356 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 NPRL3Q12980 569 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 KCNAB1Q14722 419 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 NR1I3Q14994 352 aa4.48□□□□□ -1.69
SF3B1-202ENST00000409915 NR1D2Q14995 579 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms