RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 FARSAQ9Y285 508 aaKnown RBP17.07■□□□□ 0.32
LSM5-204ENST00000409909 E7EQ34 232 aa17.06■□□□□ 0.32
LSM5-204ENST00000409909 H3BMM5 538 aa17.06■□□□□ 0.32
LSM5-204ENST00000409909 PFDN6O15212 129 aa17.06■□□□□ 0.32
LSM5-204ENST00000409909 PRICKLE3O43900 615 aaPredicted RBP17.06■□□□□ 0.32
LSM5-204ENST00000409909 MATN4O95460 622 aa17.06■□□□□ 0.32
LSM5-204ENST00000409909 KLK3P07288 261 aaPredicted RBP17.06■□□□□ 0.32
LSM5-204ENST00000409909 PKMP14618 531 aaKnown RBP17.06■□□□□ 0.32
LSM5-204ENST00000409909 TCP1P17987 556 aaKnown RBP17.06■□□□□ 0.32
LSM5-204ENST00000409909 CHRM3P20309 590 aa17.06■□□□□ 0.32
LSM5-204ENST00000409909 PTGIRP43119 386 aa17.06■□□□□ 0.32
LSM5-204ENST00000409909 BDKRB1P46663 353 aa17.06■□□□□ 0.32
LSM5-204ENST00000409909 RPS15P62841 145 aaKnown RBP17.06■□□□□ 0.32
LSM5-204ENST00000409909 CTBP1Q13363 440 aa17.06■□□□□ 0.32
LSM5-204ENST00000409909 IZUMO3Q5VZ72 239 aa17.06■□□□□ 0.32
LSM5-204ENST00000409909 CNSTQ6PJW8 725 aa17.06■□□□□ 0.32
LSM5-204ENST00000409909 TAX1BP1Q86VP1 789 aa17.06■□□□□ 0.32
LSM5-204ENST00000409909 SLCO2A1Q92959 643 aa17.06■□□□□ 0.32
LSM5-204ENST00000409909 INTS10Q9NVR2 710 aaKnown RBP17.06■□□□□ 0.32
LSM5-204ENST00000409909 PCYOX1Q9UHG3 505 aa17.06■□□□□ 0.32
LSM5-204ENST00000409909 TSR3Q9UJK0 312 aaKnown RBP17.06■□□□□ 0.32
LSM5-204ENST00000409909 MAD1L1Q9Y6D9 718 aa17.06■□□□□ 0.32
LSM5-204ENST00000409909 FER1L5A0AVI2 2057 aa17.06■□□□□ 0.32
LSM5-204ENST00000409909 OR2B3O76000 313 aa17.05■□□□□ 0.32
LSM5-204ENST00000409909 USP1O94782 785 aa17.05■□□□□ 0.32
LSM5-204ENST00000409909 MAGP20916 626 aa17.05■□□□□ 0.32
LSM5-204ENST00000409909 IVDP26440 423 aa17.05■□□□□ 0.32
LSM5-204ENST00000409909 CLCN7P51798 805 aa17.05■□□□□ 0.32
LSM5-204ENST00000409909 GNG11P61952 73 aa17.05■□□□□ 0.32
LSM5-204ENST00000409909 IL10RAQ13651 578 aa17.05■□□□□ 0.32
LSM5-204ENST00000409909 THOC5Q13769 683 aaKnown RBP17.05■□□□□ 0.32
LSM5-204ENST00000409909 PTK6Q13882 451 aa17.05■□□□□ 0.32
LSM5-204ENST00000409909 UGT8Q16880 541 aa17.05■□□□□ 0.32
LSM5-204ENST00000409909 PTCHD3Q3KNS1 767 aa17.05■□□□□ 0.32
LSM5-204ENST00000409909 ACSBG2Q5FVE4 666 aa17.05■□□□□ 0.32
LSM5-204ENST00000409909 FAM69BQ5VUD6 431 aa17.05■□□□□ 0.32
LSM5-204ENST00000409909 PAPD7Q5XG87 772 aaKnown RBP17.05■□□□□ 0.32
LSM5-204ENST00000409909 ZNF385CQ66K41 422 aaPredicted RBP17.05■□□□□ 0.32
LSM5-204ENST00000409909 ZNF549Q6P9A3 640 aa17.05■□□□□ 0.32
LSM5-204ENST00000409909 CREG2Q8IUH2 290 aa17.05■□□□□ 0.32
LSM5-204ENST00000409909 SYTL1Q8IYJ3 562 aa17.05■□□□□ 0.32
LSM5-204ENST00000409909 ZBTB2Q8N680 514 aa17.05■□□□□ 0.32
LSM5-204ENST00000409909 DENND1AQ8TEH3 1009 aa17.05■□□□□ 0.32
LSM5-204ENST00000409909 RAD51AP1Q96B01 352 aa17.05■□□□□ 0.32
LSM5-204ENST00000409909 ABHD17AQ96GS6 310 aa17.05■□□□□ 0.32
LSM5-204ENST00000409909 CAPZA3Q96KX2 299 aa17.05■□□□□ 0.32
LSM5-204ENST00000409909 SLC30A3Q99726 388 aa17.05■□□□□ 0.32
LSM5-204ENST00000409909 FAM117AQ9C073 453 aa17.05■□□□□ 0.32
LSM5-204ENST00000409909 FBXO6Q9NRD1 293 aaPredicted RBP17.05■□□□□ 0.32
LSM5-204ENST00000409909 SLC39A10Q9ULF5 831 aa17.05■□□□□ 0.32
LSM5-204ENST00000409909 POLHQ9Y253 713 aa17.05■□□□□ 0.32
LSM5-204ENST00000409909 MED16Q9Y2X0 877 aa17.05■□□□□ 0.32
LSM5-204ENST00000409909 CTAGE9A4FU28 777 aa17.04■□□□□ 0.32
LSM5-204ENST00000409909 DNALI1O14645 258 aaPredicted RBP17.04■□□□□ 0.32
LSM5-204ENST00000409909 SLC28A2O43868 658 aa17.04■□□□□ 0.32
LSM5-204ENST00000409909 BANF1O75531 89 aa17.04■□□□□ 0.32
LSM5-204ENST00000409909 RAB40ALP0C0E4 278 aa17.04■□□□□ 0.32
LSM5-204ENST00000409909 ATP5DP30049 168 aa17.04■□□□□ 0.32
LSM5-204ENST00000409909 SLC1A2P43004 574 aa17.04■□□□□ 0.32
LSM5-204ENST00000409909 LONRF1Q17RB8 773 aa17.04■□□□□ 0.32
LSM5-204ENST00000409909 MSS51Q4VC12 460 aa17.04■□□□□ 0.32
LSM5-204ENST00000409909 FCRL6Q6DN72 434 aa17.04■□□□□ 0.32
LSM5-204ENST00000409909 TTC23LQ6PF05 361 aa17.04■□□□□ 0.32
LSM5-204ENST00000409909 FAM198BQ6UWH4 519 aa17.04■□□□□ 0.32
LSM5-204ENST00000409909 PRICKLE2Q7Z3G6 844 aa17.04■□□□□ 0.32
LSM5-204ENST00000409909 SYVN1Q86TM6 617 aa17.04■□□□□ 0.32
LSM5-204ENST00000409909 GPR135Q8IZ08 494 aa17.04■□□□□ 0.32
LSM5-204ENST00000409909 ENDOVQ8N8Q3 282 aaKnown RBP17.04■□□□□ 0.32
LSM5-204ENST00000409909 N4BP2L2Q92802 583 aaPredicted RBP17.04■□□□□ 0.32
LSM5-204ENST00000409909 SLC22A18Q96BI1 424 aa17.04■□□□□ 0.32
LSM5-204ENST00000409909 NLNQ9BYT8 704 aa17.04■□□□□ 0.32
LSM5-204ENST00000409909 ZNF71Q9NQZ8 489 aaPredicted RBP17.04■□□□□ 0.32
LSM5-204ENST00000409909 C20orf96Q9NUD7 363 aaPredicted RBP17.04■□□□□ 0.32
LSM5-204ENST00000409909 ASIC3Q9UHC3 531 aa17.04■□□□□ 0.32
LSM5-204ENST00000409909 VPS9D1Q9Y2B5 631 aa17.04■□□□□ 0.32
LSM5-204ENST00000409909 FAM169AQ9Y6X4 670 aa17.04■□□□□ 0.32
LSM5-204ENST00000409909 PYCARD-AS1I3L0S3 204 aa17.03■□□□□ 0.32
LSM5-204ENST00000409909 J3QKU1 62 aa17.03■□□□□ 0.32
LSM5-204ENST00000409909 FANCGO15287 622 aa17.03■□□□□ 0.32
LSM5-204ENST00000409909 SUV39H1O43463 412 aa17.03■□□□□ 0.32
LSM5-204ENST00000409909 HBQ1P09105 142 aa17.03■□□□□ 0.32
LSM5-204ENST00000409909 CBSLP0DN79 551 aa17.03■□□□□ 0.32
LSM5-204ENST00000409909 CBSP35520 551 aa17.03■□□□□ 0.32
LSM5-204ENST00000409909 CCNFP41002 786 aa17.03■□□□□ 0.32
LSM5-204ENST00000409909 SF1Q15637 639 aaKnown RBP17.03■□□□□ 0.32
LSM5-204ENST00000409909 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.03■□□□□ 0.32
LSM5-204ENST00000409909 PTRH1Q86Y79 214 aaKnown RBP17.03■□□□□ 0.32
LSM5-204ENST00000409909 GIMAP7Q8NHV1 300 aa17.03■□□□□ 0.32
LSM5-204ENST00000409909 C9orf43Q8TAL5 461 aaPredicted RBP17.03■□□□□ 0.32
LSM5-204ENST00000409909 HMGCLL1Q8TB92 370 aa17.03■□□□□ 0.32
LSM5-204ENST00000409909 ANP32BQ92688 251 aaKnown RBP17.03■□□□□ 0.32
LSM5-204ENST00000409909 FOPNLQ96NB1 174 aa17.03■□□□□ 0.32
LSM5-204ENST00000409909 RAB11FIP5Q9BXF6 653 aa17.03■□□□□ 0.32
LSM5-204ENST00000409909 SLC7A5P2Q9GIP4 190 aa17.03■□□□□ 0.32
LSM5-204ENST00000409909 EURLQ9NYK6 297 aa17.03■□□□□ 0.32
LSM5-204ENST00000409909 TCFL5Q9UL49 500 aa17.03■□□□□ 0.32
LSM5-204ENST00000409909 PLCL2Q9UPR0 1127 aa17.03■□□□□ 0.32
LSM5-204ENST00000409909 MAN2B2Q9Y2E5 1009 aa17.03■□□□□ 0.32
LSM5-204ENST00000409909 HEMK1Q9Y5R4 338 aaPredicted RBP17.03■□□□□ 0.32
LSM5-204ENST00000409909 AP1M2Q9Y6Q5 423 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms