RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 CCSMST1Q4G0I0 132 aa17.56■□□□□ 0.4
PAX3-208ENST00000409828 LCA5Q86VQ0 697 aa17.56■□□□□ 0.4
PAX3-208ENST00000409828 LINC01555Q8NAE3 123 aa17.56■□□□□ 0.4
PAX3-208ENST00000409828 HNRNPLLQ8WVV9 542 aaKnown RBP17.56■□□□□ 0.4
PAX3-208ENST00000409828 JPH3Q8WXH2 748 aaPredicted RBP17.56■□□□□ 0.4
PAX3-208ENST00000409828 PKP4Q99569 1192 aa17.56■□□□□ 0.4
PAX3-208ENST00000409828 TMEM109Q9BVC6 243 aa17.56■□□□□ 0.4
PAX3-208ENST00000409828 PITPNM3Q9BZ71 974 aa17.56■□□□□ 0.4
PAX3-208ENST00000409828 SEMA6CQ9H3T2 930 aa17.56■□□□□ 0.4
PAX3-208ENST00000409828 C1GALT1Q9NS00 363 aa17.56■□□□□ 0.4
PAX3-208ENST00000409828 EURLQ9NYK6 297 aa17.56■□□□□ 0.4
PAX3-208ENST00000409828 AKAP7Q9P0M2 348 aaPredicted RBP17.56■□□□□ 0.4
PAX3-208ENST00000409828 CTNNAL1Q9UBT7 734 aa17.56■□□□□ 0.4
PAX3-208ENST00000409828 ADAMTS6Q9UKP5 1117 aa17.56■□□□□ 0.4
PAX3-208ENST00000409828 MSRB2Q9Y3D2 182 aa17.56■□□□□ 0.4
PAX3-208ENST00000409828 HEATR5BQ9P2D3 2071 aa17.56■□□□□ 0.4
PAX3-208ENST00000409828 CCDC187A0A096LP49 1063 aa17.55■□□□□ 0.4
PAX3-208ENST00000409828 A0A096LPK6 155 aa17.55■□□□□ 0.4
PAX3-208ENST00000409828 PABPN1LA6NDY0 278 aaKnown RBP17.55■□□□□ 0.4
PAX3-208ENST00000409828 TRIM49D1C9J1S8 452 aa17.55■□□□□ 0.4
PAX3-208ENST00000409828 PRICKLE3O43900 615 aaPredicted RBP17.55■□□□□ 0.4
PAX3-208ENST00000409828 SLC16A8O95907 504 aa17.55■□□□□ 0.4
PAX3-208ENST00000409828 SHBGP04278 402 aa17.55■□□□□ 0.4
PAX3-208ENST00000409828 LTA4HP09960 611 aaKnown RBP17.55■□□□□ 0.4
PAX3-208ENST00000409828 POLR2CP19387 275 aaPredicted RBP17.55■□□□□ 0.4
PAX3-208ENST00000409828 PRDX3P30048 256 aaKnown RBP17.55■□□□□ 0.4
PAX3-208ENST00000409828 MLLT3P42568 568 aaPredicted RBP17.55■□□□□ 0.4
PAX3-208ENST00000409828 GFERP55789 205 aa17.55■□□□□ 0.4
PAX3-208ENST00000409828 SLC5A12Q1EHB4 618 aa17.55■□□□□ 0.4
PAX3-208ENST00000409828 FAM83EQ2M2I3 478 aa17.55■□□□□ 0.4
PAX3-208ENST00000409828 IRGCQ6NXR0 463 aa17.55■□□□□ 0.4
PAX3-208ENST00000409828 IGF2-ASQ6U949 168 aa17.55■□□□□ 0.4
PAX3-208ENST00000409828 B3GNT8Q7Z7M8 397 aa17.55■□□□□ 0.4
PAX3-208ENST00000409828 FLVCR1-AS1Q8TAF5 88 aa17.55■□□□□ 0.4
PAX3-208ENST00000409828 RHEBL1Q8TAI7 183 aa17.55■□□□□ 0.4
PAX3-208ENST00000409828 ACMSDQ8TDX5 336 aa17.55■□□□□ 0.4
PAX3-208ENST00000409828 ATL1Q8WXF7 558 aa17.55■□□□□ 0.4
PAX3-208ENST00000409828 KLHL6Q8WZ60 621 aa17.55■□□□□ 0.4
PAX3-208ENST00000409828 SMPDL3AQ92484 453 aa17.55■□□□□ 0.4
PAX3-208ENST00000409828 KIAA1191Q96A73 305 aa17.55■□□□□ 0.4
PAX3-208ENST00000409828 CCDC74BQ96LY2 380 aa17.55■□□□□ 0.4
PAX3-208ENST00000409828 TGM7Q96PF1 710 aa17.55■□□□□ 0.4
PAX3-208ENST00000409828 CMKLR1Q99788 373 aa17.55■□□□□ 0.4
PAX3-208ENST00000409828 SCNM1Q9BWG6 230 aa17.55■□□□□ 0.4
PAX3-208ENST00000409828 NRSN2Q9GZP1 204 aa17.55■□□□□ 0.4
PAX3-208ENST00000409828 CHRNA10Q9GZZ6 450 aa17.55■□□□□ 0.4
PAX3-208ENST00000409828 ZMYND15Q9H091 742 aa17.55■□□□□ 0.4
PAX3-208ENST00000409828 ZNF768Q9H5H4 540 aaKnown RBP17.55■□□□□ 0.4
PAX3-208ENST00000409828 XKR8Q9H6D3 395 aa17.55■□□□□ 0.4
PAX3-208ENST00000409828 ACTR10Q9NZ32 417 aa17.55■□□□□ 0.4
PAX3-208ENST00000409828 TMEM9Q9P0T7 183 aa17.55■□□□□ 0.4
PAX3-208ENST00000409828 TSR3Q9UJK0 312 aaKnown RBP17.55■□□□□ 0.4
PAX3-208ENST00000409828 PLAGL1Q9UM63 463 aa17.55■□□□□ 0.4
PAX3-208ENST00000409828 OARD1Q9Y530 152 aa17.55■□□□□ 0.4
PAX3-208ENST00000409828 E7ENX8 843 aa17.54■□□□□ 0.4
PAX3-208ENST00000409828 KLHL2O95198 593 aa17.54■□□□□ 0.4
PAX3-208ENST00000409828 CCND1P24385 295 aa17.54■□□□□ 0.4
PAX3-208ENST00000409828 HNMTP50135 292 aa17.54■□□□□ 0.4
PAX3-208ENST00000409828 PNLIPRP1P54315 467 aa17.54■□□□□ 0.4
PAX3-208ENST00000409828 FOXK2Q01167 660 aa17.54■□□□□ 0.4
PAX3-208ENST00000409828 TAP2Q03519 686 aa17.54■□□□□ 0.4
PAX3-208ENST00000409828 CAMK2BQ13554 666 aa17.54■□□□□ 0.4
PAX3-208ENST00000409828 CSHL1Q14406 222 aa17.54■□□□□ 0.4
PAX3-208ENST00000409828 PHKG1Q16816 387 aa17.54■□□□□ 0.4
PAX3-208ENST00000409828 PHF19Q5T6S3 580 aa17.54■□□□□ 0.4
PAX3-208ENST00000409828 SPESP1Q6UW49 350 aa17.54■□□□□ 0.4
PAX3-208ENST00000409828 SPNS2Q8IVW8 549 aa17.54■□□□□ 0.4
PAX3-208ENST00000409828 CENPLQ8N0S6 344 aaPredicted RBP17.54■□□□□ 0.4
PAX3-208ENST00000409828 AGBL5Q8NDL9 886 aa17.54■□□□□ 0.4
PAX3-208ENST00000409828 WDR36Q8NI36 951 aaKnown RBP17.54■□□□□ 0.4
PAX3-208ENST00000409828 STAG3L4Q8TBR4 150 aa17.54■□□□□ 0.4
PAX3-208ENST00000409828 MZB1Q8WU39 189 aa17.54■□□□□ 0.4
PAX3-208ENST00000409828 ZNF480Q8WV37 535 aa17.54■□□□□ 0.4
PAX3-208ENST00000409828 B3GNT4Q9C0J1 378 aa17.54■□□□□ 0.4
PAX3-208ENST00000409828 IGSF5Q9NSI5 407 aa17.54■□□□□ 0.4
PAX3-208ENST00000409828 PCDHGA8Q9Y5G5 932 aa17.54■□□□□ 0.4
PAX3-208ENST00000409828 KLK4Q9Y5K2 254 aa17.54■□□□□ 0.4
PAX3-208ENST00000409828 GSAPA4D1B5 854 aa17.53■□□□□ 0.4
PAX3-208ENST00000409828 CDC7O00311 574 aa17.53■□□□□ 0.4
PAX3-208ENST00000409828 RFPL1O75677 317 aa17.53■□□□□ 0.4
PAX3-208ENST00000409828 ZBTB11O95625 1053 aaPredicted RBP17.53■□□□□ 0.4
PAX3-208ENST00000409828 IMPA1P29218 277 aa17.53■□□□□ 0.4
PAX3-208ENST00000409828 OAS2P29728 719 aaKnown RBP17.53■□□□□ 0.4
PAX3-208ENST00000409828 CSTF2P33240 577 aaKnown RBP eCLIP17.53■□□□□ 0.4
PAX3-208ENST00000409828 KPNA2P52292 529 aaKnown RBP17.53■□□□□ 0.4
PAX3-208ENST00000409828 CLDN6P56747 220 aa17.53■□□□□ 0.4
PAX3-208ENST00000409828 NAA25Q14CX7 972 aa17.53■□□□□ 0.4
PAX3-208ENST00000409828 RTP5Q14D33 572 aa17.53■□□□□ 0.4
PAX3-208ENST00000409828 ACAP2Q15057 778 aa17.53■□□□□ 0.4
PAX3-208ENST00000409828 TSNQ15631 228 aaKnown RBP17.53■□□□□ 0.4
PAX3-208ENST00000409828 TSNAXIP1Q2TAA8 658 aa17.53■□□□□ 0.4
PAX3-208ENST00000409828 CACHD1Q5VU97 1274 aa17.53■□□□□ 0.4
PAX3-208ENST00000409828 FBXO38Q6PIJ6 1188 aa17.53■□□□□ 0.4
PAX3-208ENST00000409828 ISCA2Q86U28 154 aa17.53■□□□□ 0.4
PAX3-208ENST00000409828 LRRC56Q8IYG6 542 aaPredicted RBP17.53■□□□□ 0.4
PAX3-208ENST00000409828 LMNTD1Q8N9Z9 388 aa17.53■□□□□ 0.4
PAX3-208ENST00000409828 MYRIPQ8NFW9 859 aa17.53■□□□□ 0.4
PAX3-208ENST00000409828 FBXL8Q96CD0 374 aa17.53■□□□□ 0.4
PAX3-208ENST00000409828 SLC41A2Q96JW4 573 aa17.53■□□□□ 0.4
PAX3-208ENST00000409828 IL17FQ96PD4 163 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms