RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 NUDT8Q8WV74 236 aa20.14■□□□□ 0.81
USP39-203ENST00000409470 ZNF514Q96K75 400 aaPredicted RBP20.14■□□□□ 0.81
USP39-203ENST00000409470 PKP2Q99959 881 aa20.14■□□□□ 0.81
USP39-203ENST00000409470 INTS7Q9NVH2 962 aaKnown RBP20.14■□□□□ 0.81
USP39-203ENST00000409470 ASIC5Q9NY37 505 aa20.14■□□□□ 0.81
USP39-203ENST00000409470 EGFL7Q9UHF1 273 aa20.14■□□□□ 0.81
USP39-203ENST00000409470 RIMS3Q9UJD0 308 aa20.14■□□□□ 0.81
USP39-203ENST00000409470 TCRBV3S1A0A5B6 114 aa20.14■□□□□ 0.81
USP39-203ENST00000409470 GRXCR2A6NFK2 248 aa20.14■□□□□ 0.81
USP39-203ENST00000409470 PEX1O43933 1283 aa20.14■□□□□ 0.81
USP39-203ENST00000409470 PRAMEF4O60810 478 aa20.14■□□□□ 0.81
USP39-203ENST00000409470 LILRB5O75023 590 aa20.14■□□□□ 0.81
USP39-203ENST00000409470 LAMP2P13473 410 aa20.14■□□□□ 0.81
USP39-203ENST00000409470 GRIA3P42263 894 aa20.14■□□□□ 0.81
USP39-203ENST00000409470 PIP5KL1Q5T9C9 394 aa20.14■□□□□ 0.81
USP39-203ENST00000409470 PRAMEF9Q5VWM5 478 aa20.14■□□□□ 0.81
USP39-203ENST00000409470 ANO7Q6IWH7 933 aa20.14■□□□□ 0.81
USP39-203ENST00000409470 LILRA2Q8N149 483 aa20.14■□□□□ 0.81
USP39-203ENST00000409470 DPP10Q8N608 796 aa20.14■□□□□ 0.81
USP39-203ENST00000409470 PKP4Q99569 1192 aa20.14■□□□□ 0.81
USP39-203ENST00000409470 TRMT61BQ9BVS5 477 aaKnown RBP20.14■□□□□ 0.81
USP39-203ENST00000409470 GULP1Q9UBP9 304 aa20.14■□□□□ 0.81
USP39-203ENST00000409470 DTNAQ9Y4J8 743 aa20.14■□□□□ 0.81
USP39-203ENST00000409470 C15orf38-AP3S2A0A0A6YYH1 394 aa20.13■□□□□ 0.81
USP39-203ENST00000409470 ARNTLO00327 626 aa20.13■□□□□ 0.81
USP39-203ENST00000409470 JUPP14923 745 aa20.13■□□□□ 0.81
USP39-203ENST00000409470 AQP4P55087 323 aa20.13■□□□□ 0.81
USP39-203ENST00000409470 XKR6Q5GH73 641 aa20.13■□□□□ 0.81
USP39-203ENST00000409470 FRG2Q64ET8 278 aa20.13■□□□□ 0.81
USP39-203ENST00000409470 NANOGP8Q6NSW7 305 aa20.13■□□□□ 0.81
USP39-203ENST00000409470 CRTC3Q6UUV7 619 aa20.13■□□□□ 0.81
USP39-203ENST00000409470 ARPINQ7Z6K5 226 aa20.13■□□□□ 0.81
USP39-203ENST00000409470 IFNEQ86WN2 208 aa20.13■□□□□ 0.81
USP39-203ENST00000409470 TMEM126BQ8IUX1 230 aa20.13■□□□□ 0.81
USP39-203ENST00000409470 KIAA2013Q8IYS2 634 aa20.13■□□□□ 0.81
USP39-203ENST00000409470 OR2T34Q8NGX1 318 aa20.13■□□□□ 0.81
USP39-203ENST00000409470 OR2T3Q8NH03 318 aa20.13■□□□□ 0.81
USP39-203ENST00000409470 ZUFSPQ96AP4 578 aa20.13■□□□□ 0.81
USP39-203ENST00000409470 FRG2BQ96QU4 278 aa20.13■□□□□ 0.81
USP39-203ENST00000409470 KCTD14Q9BQ13 255 aaPredicted RBP20.13■□□□□ 0.81
USP39-203ENST00000409470 RPP25Q9BUL9 199 aaKnown RBP20.13■□□□□ 0.81
USP39-203ENST00000409470 ALG2Q9H553 416 aa20.13■□□□□ 0.81
USP39-203ENST00000409470 NANOGQ9H9S0 305 aa20.13■□□□□ 0.81
USP39-203ENST00000409470 EIF4E1BA6NMX2 242 aaKnown RBP20.12■□□□□ 0.81
USP39-203ENST00000409470 MID1O15344 667 aa20.12■□□□□ 0.81
USP39-203ENST00000409470 RNASEH1O60930 286 aaKnown RBP20.12■□□□□ 0.81
USP39-203ENST00000409470 RNASEH2AO75792 299 aaKnown RBP20.12■□□□□ 0.81
USP39-203ENST00000409470 SLC16A8O95907 504 aa20.12■□□□□ 0.81
USP39-203ENST00000409470 ZNF8P17098 575 aaPredicted RBP20.12■□□□□ 0.81
USP39-203ENST00000409470 ATP6V1B2P21281 511 aa20.12■□□□□ 0.81
USP39-203ENST00000409470 LIPEQ05469 1076 aa20.12■□□□□ 0.81
USP39-203ENST00000409470 KLC1Q07866 573 aa20.12■□□□□ 0.81
USP39-203ENST00000409470 ZNF658BQ4V348 819 aaPredicted RBP20.12■□□□□ 0.81
USP39-203ENST00000409470 USP39Q53GS9 565 aaKnown RBP20.12■□□□□ 0.81
USP39-203ENST00000409470 LIPJQ5W064 366 aa20.12■□□□□ 0.81
USP39-203ENST00000409470 IRGCQ6NXR0 463 aa20.12■□□□□ 0.81
USP39-203ENST00000409470 SUSD1Q6UWL2 747 aa20.12■□□□□ 0.81
USP39-203ENST00000409470 HID1Q8IV36 788 aa20.12■□□□□ 0.81
USP39-203ENST00000409470 GLB1L3Q8NCI6 653 aaPredicted RBP20.12■□□□□ 0.81
USP39-203ENST00000409470 HIC2Q96JB3 615 aa20.12■□□□□ 0.81
USP39-203ENST00000409470 TMEM74Q96NL1 305 aa20.12■□□□□ 0.81
USP39-203ENST00000409470 ZNF839A8K0R7 811 aa20.12■□□□□ 0.81
USP39-203ENST00000409470 VEGFDO43915 354 aa20.12■□□□□ 0.81
USP39-203ENST00000409470 UGDHO60701 494 aa20.12■□□□□ 0.81
USP39-203ENST00000409470 POP7O75817 140 aaKnown RBP20.12■□□□□ 0.81
USP39-203ENST00000409470 BCKDHAP12694 445 aa20.12■□□□□ 0.81
USP39-203ENST00000409470 IMPA1P29218 277 aa20.12■□□□□ 0.81
USP39-203ENST00000409470 SLC7A1P30825 629 aa20.12■□□□□ 0.81
USP39-203ENST00000409470 SOX9P48436 509 aa20.12■□□□□ 0.81
USP39-203ENST00000409470 GSK3BP49841 420 aa20.12■□□□□ 0.81
USP39-203ENST00000409470 KIAA0040Q15053 153 aa20.12■□□□□ 0.81
USP39-203ENST00000409470 PLA2G4EQ3MJ16 856 aa20.12■□□□□ 0.81
USP39-203ENST00000409470 FAM174BQ3ZCQ3 159 aa20.12■□□□□ 0.81
USP39-203ENST00000409470 TRMT11Q7Z4G4 463 aaKnown RBP20.12■□□□□ 0.81
USP39-203ENST00000409470 GALNT13Q8IUC8 556 aa20.12■□□□□ 0.81
USP39-203ENST00000409470 ZNF513Q8N8E2 541 aaPredicted RBP20.12■□□□□ 0.81
USP39-203ENST00000409470 PLA2G15Q8NCC3 412 aa20.12■□□□□ 0.81
USP39-203ENST00000409470 ICA1LQ8NDH6 482 aa20.12■□□□□ 0.81
USP39-203ENST00000409470 CLHC1Q8NHS4 586 aa20.12■□□□□ 0.81
USP39-203ENST00000409470 SLC13A3Q8WWT9 602 aa20.12■□□□□ 0.81
USP39-203ENST00000409470 EFHD1Q9BUP0 239 aa20.12■□□□□ 0.81
USP39-203ENST00000409470 BATF3Q9NR55 127 aa20.12■□□□□ 0.81
USP39-203ENST00000409470 DENND4AQ7Z401 1863 aa20.11■□□□□ 0.81
USP39-203ENST00000409470 E7EQ34 232 aa20.11■□□□□ 0.81
USP39-203ENST00000409470 PCDH8O95206 1070 aa20.11■□□□□ 0.81
USP39-203ENST00000409470 C1orf105O95561 183 aa20.11■□□□□ 0.81
USP39-203ENST00000409470 DRD3P35462 400 aa20.11■□□□□ 0.81
USP39-203ENST00000409470 EEFSECP57772 596 aaKnown RBP20.11■□□□□ 0.81
USP39-203ENST00000409470 PLIN5Q00G26 463 aa20.11■□□□□ 0.81
USP39-203ENST00000409470 CST6Q15828 149 aa20.11■□□□□ 0.81
USP39-203ENST00000409470 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.11■□□□□ 0.81
USP39-203ENST00000409470 PRR23BQ6ZRT6 265 aa20.11■□□□□ 0.81
USP39-203ENST00000409470 EP400NLQ6ZTU2 488 aa20.11■□□□□ 0.81
USP39-203ENST00000409470 SPPL2CQ8IUH8 684 aa20.11■□□□□ 0.81
USP39-203ENST00000409470 KRTCAP2Q8N6L1 136 aa20.11■□□□□ 0.81
USP39-203ENST00000409470 CATSPER1Q8NEC5 780 aa20.11■□□□□ 0.81
USP39-203ENST00000409470 CMTM7Q96FZ5 175 aa20.11■□□□□ 0.81
USP39-203ENST00000409470 PPM1MQ96MI6 270 aa20.11■□□□□ 0.81
USP39-203ENST00000409470 ACTR3BQ9P1U1 418 aa20.11■□□□□ 0.81
USP39-203ENST00000409470 GPR34Q9UPC5 381 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms