RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 NAT9Q9BTE0 207 aa12.4□□□□□ -0.42
SNORD88B-201ENST00000408454 EIF3FO00303 357 aaPredicted RBP12.39□□□□□ -0.43
SNORD88B-201ENST00000408454 CHRM3P20309 590 aa12.39□□□□□ -0.43
SNORD88B-201ENST00000408454 HRH2P25021 359 aa12.39□□□□□ -0.43
SNORD88B-201ENST00000408454 AOAHP28039 575 aa12.39□□□□□ -0.43
SNORD88B-201ENST00000408454 RPL22P35268 128 aaKnown RBP12.39□□□□□ -0.43
SNORD88B-201ENST00000408454 CDKN1CP49918 316 aaPredicted RBP12.39□□□□□ -0.43
SNORD88B-201ENST00000408454 CCL11P51671 97 aa12.39□□□□□ -0.43
SNORD88B-201ENST00000408454 EMP3P54852 163 aa12.39□□□□□ -0.43
SNORD88B-201ENST00000408454 SKP1P63208 163 aa12.39□□□□□ -0.43
SNORD88B-201ENST00000408454 NKAIN1Q4KMZ8 207 aa12.39□□□□□ -0.43
SNORD88B-201ENST00000408454 ANKRD20A4Q4UJ75 823 aa12.39□□□□□ -0.43
SNORD88B-201ENST00000408454 FAM199XQ6PEV8 388 aaPredicted RBP12.39□□□□□ -0.43
SNORD88B-201ENST00000408454 CDHR3Q6ZTQ4 885 aa12.39□□□□□ -0.43
SNORD88B-201ENST00000408454 NEK10Q6ZWH5 1172 aa12.39□□□□□ -0.43
SNORD88B-201ENST00000408454 PCGF5Q86SE9 256 aa12.39□□□□□ -0.43
SNORD88B-201ENST00000408454 PALM2Q8IXS6 379 aa12.39□□□□□ -0.43
SNORD88B-201ENST00000408454 FAM26EQ8N5C1 309 aa12.39□□□□□ -0.43
SNORD88B-201ENST00000408454 TAB3Q8N5C8 712 aaPredicted RBP12.39□□□□□ -0.43
SNORD88B-201ENST00000408454 ZNF655Q8N720 491 aaPredicted RBP12.39□□□□□ -0.43
SNORD88B-201ENST00000408454 CFAP61Q8NHU2 1237 aa12.39□□□□□ -0.43
SNORD88B-201ENST00000408454 MVB12AQ96EY5 273 aa12.39□□□□□ -0.43
SNORD88B-201ENST00000408454 RUNDC3BQ96NL0 473 aa12.39□□□□□ -0.43
SNORD88B-201ENST00000408454 KIFC1Q9BW19 673 aa12.39□□□□□ -0.43
SNORD88B-201ENST00000408454 FAM129AQ9BZQ8 928 aa12.39□□□□□ -0.43
SNORD88B-201ENST00000408454 TRIM4Q9C037 500 aa12.39□□□□□ -0.43
SNORD88B-201ENST00000408454 XKR8Q9H6D3 395 aa12.39□□□□□ -0.43
SNORD88B-201ENST00000408454 ATP13A2Q9NQ11 1180 aa12.39□□□□□ -0.43
SNORD88B-201ENST00000408454 EURLQ9NYK6 297 aa12.39□□□□□ -0.43
SNORD88B-201ENST00000408454 TTC7AQ9ULT0 858 aaPredicted RBP12.39□□□□□ -0.43
SNORD88B-201ENST00000408454 SOX13Q9UN79 622 aa12.39□□□□□ -0.43
SNORD88B-201ENST00000408454 CTAGE9A4FU28 777 aa12.38□□□□□ -0.43
SNORD88B-201ENST00000408454 SDR42E2A6NKP2 422 aa12.38□□□□□ -0.43
SNORD88B-201ENST00000408454 SMAPO00193 183 aa12.38□□□□□ -0.43
SNORD88B-201ENST00000408454 PGRMC1O00264 195 aaKnown RBP12.38□□□□□ -0.43
SNORD88B-201ENST00000408454 VAPBO95292 243 aa12.38□□□□□ -0.43
SNORD88B-201ENST00000408454 CBSLP0DN79 551 aa12.38□□□□□ -0.43
SNORD88B-201ENST00000408454 ALAS2P22557 587 aa12.38□□□□□ -0.43
SNORD88B-201ENST00000408454 FDXRP22570 491 aa12.38□□□□□ -0.43
SNORD88B-201ENST00000408454 CCR7P32248 378 aa12.38□□□□□ -0.43
SNORD88B-201ENST00000408454 CBSP35520 551 aa12.38□□□□□ -0.43
SNORD88B-201ENST00000408454 EIF3BP55884 814 aaKnown RBP12.38□□□□□ -0.43
SNORD88B-201ENST00000408454 OCA2Q04671 838 aa12.38□□□□□ -0.43
SNORD88B-201ENST00000408454 ABRQ12979 859 aa12.38□□□□□ -0.43
SNORD88B-201ENST00000408454 AIMP2Q13155 320 aaKnown RBP12.38□□□□□ -0.43
SNORD88B-201ENST00000408454 PTK6Q13882 451 aa12.38□□□□□ -0.43
SNORD88B-201ENST00000408454 ELOAQ14241 798 aaKnown RBP12.38□□□□□ -0.43
SNORD88B-201ENST00000408454 MUM1Q2TAK8 710 aa12.38□□□□□ -0.43
SNORD88B-201ENST00000408454 LRRC8AQ8IWT6 810 aa12.38□□□□□ -0.43
SNORD88B-201ENST00000408454 IQCKQ8N0W5 287 aa12.38□□□□□ -0.43
SNORD88B-201ENST00000408454 ZADH2Q8N4Q0 377 aa12.38□□□□□ -0.43
SNORD88B-201ENST00000408454 RERGQ96A58 199 aaPredicted RBP12.38□□□□□ -0.43
SNORD88B-201ENST00000408454 SELENOSQ9BQE4 189 aa12.38□□□□□ -0.43
SNORD88B-201ENST00000408454 FAM167BQ9BTA0 163 aa12.38□□□□□ -0.43
SNORD88B-201ENST00000408454 CHRAC1Q9NRG0 131 aa12.38□□□□□ -0.43
SNORD88B-201ENST00000408454 SEMA3GQ9NS98 782 aa12.38□□□□□ -0.43
SNORD88B-201ENST00000408454 TREX1Q9NSU2 369 aa12.38□□□□□ -0.43
SNORD88B-201ENST00000408454 PIH1D1Q9NWS0 290 aaKnown RBP12.38□□□□□ -0.43
SNORD88B-201ENST00000408454 PTRH2Q9Y3E5 179 aaKnown RBP12.38□□□□□ -0.43
SNORD88B-201ENST00000408454 GCN1Q92616 2671 aaKnown RBP12.38□□□□□ -0.43
SNORD88B-201ENST00000408454 FAM237BA0A1B0GVD1 139 aa12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 TCRBV7S2A1N4TA0A589 114 aa12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 OR51F1A6NGY5 319 aa12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 BHMG1C9JSJ3 638 aaPredicted RBP12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 CES2O00748 559 aa12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 DSCR3O14972 297 aa12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 KIF5CO60282 957 aa12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 CEACAM4O75871 244 aa12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 TTC4O95801 387 aa12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 OTX2P32243 289 aa12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 CA5AP35218 305 aa12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 RPA3P35244 121 aaPredicted RBP12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 PTGIRP43119 386 aa12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 CD97P48960 835 aa12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 RGS4P49798 205 aa12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 ABATP80404 500 aa12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 NFKB2Q00653 900 aa12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 RELAQ04206 551 aa12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 GPS1Q13098 491 aa12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 UBAP2LQ14157 1087 aaKnown RBP12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 MYBPC3Q14896 1274 aa12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 NDUFA9Q16795 377 aa12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 TYSND1Q2T9J0 566 aa12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 FAM182AQ5T1J6 154 aa12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 ATP1A1-AS1Q5TC04 95 aa12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 FAM198BQ6UWH4 519 aa12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 MCATQ8IVS2 390 aaKnown RBP12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 TBC1D19Q8N5T2 526 aa12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 ZBTB2Q8N680 514 aa12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 LMNTD1Q8N9Z9 388 aa12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 MCUQ8NE86 351 aa12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 CPT1CQ8TCG5 803 aa12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 MCOLN3Q8TDD5 553 aa12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 ADAMTS17Q8TE56 1095 aa12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 SMPDL3AQ92484 453 aa12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 PNPLA2Q96AD5 504 aa12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 PCBD2Q9H0N5 130 aa12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 EPS8L2Q9H6S3 715 aa12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 MLXIPLQ9NP71 852 aa12.37□□□□□ -0.43
SNORD88B-201ENST00000408454 ENAMQ9NRM1 1142 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms