RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 GPR20Q99678 358 aa12.71□□□□□ -0.37
RNF43-201ENST00000407977 CORO1BQ9BR76 489 aa12.71□□□□□ -0.37
RNF43-201ENST00000407977 TTPALQ9BTX7 342 aa12.71□□□□□ -0.37
RNF43-201ENST00000407977 CLTCQ00610 1675 aaKnown RBP12.71□□□□□ -0.37
RNF43-201ENST00000407977 KLHL33A6NCF5 533 aa12.71□□□□□ -0.38
RNF43-201ENST00000407977 L7N2F9 121 aa12.71□□□□□ -0.38
RNF43-201ENST00000407977 SLITRK5O94991 958 aa12.71□□□□□ -0.38
RNF43-201ENST00000407977 AGR2O95994 175 aa12.71□□□□□ -0.38
RNF43-201ENST00000407977 MYCLP1P12525 358 aaPredicted RBP12.71□□□□□ -0.38
RNF43-201ENST00000407977 IFI30P13284 250 aa12.71□□□□□ -0.38
RNF43-201ENST00000407977 ABHD18Q0P651 414 aa12.71□□□□□ -0.38
RNF43-201ENST00000407977 ZNF423Q2M1K9 1284 aa12.71□□□□□ -0.38
RNF43-201ENST00000407977 SFT2D3Q587I9 215 aa12.71□□□□□ -0.38
RNF43-201ENST00000407977 CMPK2Q5EBM0 449 aa12.71□□□□□ -0.38
RNF43-201ENST00000407977 MARCH9Q86YJ5 346 aa12.71□□□□□ -0.38
RNF43-201ENST00000407977 RBM12BQ8IXT5 1001 aaKnown RBP12.71□□□□□ -0.38
RNF43-201ENST00000407977 SIDT2Q8NBJ9 832 aaKnown RBP12.71□□□□□ -0.38
RNF43-201ENST00000407977 OR2L5Q8NG80 312 aa12.71□□□□□ -0.38
RNF43-201ENST00000407977 TRPM4Q8TD43 1214 aa12.71□□□□□ -0.38
RNF43-201ENST00000407977 RIT1Q92963 219 aa12.71□□□□□ -0.38
RNF43-201ENST00000407977 HAPLN3Q96S86 360 aa12.71□□□□□ -0.38
RNF43-201ENST00000407977 SLC39A3Q9BRY0 314 aa12.71□□□□□ -0.38
RNF43-201ENST00000407977 RNF38Q9H0F5 515 aa12.71□□□□□ -0.38
RNF43-201ENST00000407977 PDZD7Q9H5P4 517 aa12.71□□□□□ -0.38
RNF43-201ENST00000407977 RPF2Q9H7B2 306 aaKnown RBP12.71□□□□□ -0.38
RNF43-201ENST00000407977 MRPS23Q9Y3D9 190 aaKnown RBP12.71□□□□□ -0.38
RNF43-201ENST00000407977 SNX10Q9Y5X0 201 aa12.71□□□□□ -0.38
RNF43-201ENST00000407977 ALPPP05187 535 aa12.71□□□□□ -0.38
RNF43-201ENST00000407977 KCNA5P22460 613 aa12.71□□□□□ -0.38
RNF43-201ENST00000407977 HSD17B2P37059 387 aa12.71□□□□□ -0.38
RNF43-201ENST00000407977 ZNF460Q14592 562 aa12.71□□□□□ -0.38
RNF43-201ENST00000407977 C6orf183Q5T699 404 aa12.71□□□□□ -0.38
RNF43-201ENST00000407977 SDHAF4Q5VUM1 108 aa12.71□□□□□ -0.38
RNF43-201ENST00000407977 TAC4Q86UU9 113 aa12.71□□□□□ -0.38
RNF43-201ENST00000407977 GPC2Q8N158 579 aa12.71□□□□□ -0.38
RNF43-201ENST00000407977 ARMC10Q8N2F6 343 aa12.71□□□□□ -0.38
RNF43-201ENST00000407977 THRSPQ92748 146 aa12.71□□□□□ -0.38
RNF43-201ENST00000407977 ZNF599Q96NL3 588 aa12.71□□□□□ -0.38
RNF43-201ENST00000407977 MIPEPQ99797 713 aa12.71□□□□□ -0.38
RNF43-201ENST00000407977 EBPLQ9BY08 206 aa12.71□□□□□ -0.38
RNF43-201ENST00000407977 OR51V1Q9H2C8 321 aa12.71□□□□□ -0.38
RNF43-201ENST00000407977 TMEM39AQ9NV64 488 aa12.71□□□□□ -0.38
RNF43-201ENST00000407977 EVLQ9UI08 416 aaPredicted RBP12.71□□□□□ -0.38
RNF43-201ENST00000407977 MAB21L2Q9Y586 359 aa12.71□□□□□ -0.38
RNF43-201ENST00000407977 OR1I1O60431 355 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 GABBR2O75899 941 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 POP4O95707 220 aaKnown RBP12.7□□□□□ -0.38
RNF43-201ENST00000407977 PRNPP04156 253 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 SLC35G6P0C7Q6 338 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 CORO1AP31146 461 aaKnown RBP12.7□□□□□ -0.38
RNF43-201ENST00000407977 BRCC3P46736 316 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 OR3A3P47888 321 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 OR3A2P47893 321 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 RASGEF1BQ0VAM2 473 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 OR2L3Q8NG85 312 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 LPPQ93052 612 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 ISOC1Q96CN7 298 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 USP29Q9HBJ7 922 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 A0A1W2PPW3 197 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 A0A1W2PRB8 838 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 H7C2Y5 167 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 FFAR2O15552 330 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 HTRA2O43464 458 aaPredicted RBP12.7□□□□□ -0.38
RNF43-201ENST00000407977 PPP1R11O60927 126 aaPredicted RBP12.7□□□□□ -0.38
RNF43-201ENST00000407977 GNALP38405 381 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 APLP1P51693 650 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 BTN3A2P78410 334 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 HSPB3Q12988 150 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 VGLL4Q14135 290 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 ZNF181Q2M3W8 571 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 SPERTQ8NA61 448 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 HMCESQ96FZ2 354 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 PYURFQ96I23 114 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 EFCAB11Q9BUY7 163 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 TRIM36Q9NQ86 728 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 MOCS1Q9NZB8 636 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 MAFBQ9Y5Q3 323 aaPredicted RBP12.7□□□□□ -0.38
RNF43-201ENST00000407977 C5orf51A6NDU8 294 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 IL7RP16871 459 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 PRKCHP24723 683 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 PYROXD2Q8N2H3 581 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 MARVELD2Q8N4S9 558 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 ZMIZ2Q8NF64 920 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 TTLQ8NG68 377 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 THAP6Q8TBB0 222 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 APOBEC3GQ9HC16 384 aaKnown RBP12.7□□□□□ -0.38
RNF43-201ENST00000407977 TM9SF3Q9HD45 589 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 HMX1Q9NP08 348 aaPredicted RBP12.7□□□□□ -0.38
RNF43-201ENST00000407977 FKBPLQ9UIM3 349 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 RIMKLBQ9ULI2 386 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 TEX264Q9Y6I9 313 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 DCCP43146 1447 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 ZNF823P16415 610 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 DCAF12L1Q5VU92 463 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 KIAA1614Q5VZ46 1190 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 CXCL17Q6UXB2 119 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 CAND1Q86VP6 1230 aaKnown RBP12.7□□□□□ -0.38
RNF43-201ENST00000407977 ASCC1Q8N9N2 400 aaKnown RBP12.7□□□□□ -0.38
RNF43-201ENST00000407977 KXD1Q9BQD3 176 aa12.7□□□□□ -0.38
RNF43-201ENST00000407977 PHF24Q9UPV7 400 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms