RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 CCSMST1Q4G0I0 132 aa18.58■□□□□ 0.56
SMARCB1-204ENST00000407422 C1orf189Q5VU69 101 aa18.58■□□□□ 0.56
SMARCB1-204ENST00000407422 TCTN3Q6NUS6 607 aa18.58■□□□□ 0.56
SMARCB1-204ENST00000407422 OTOAQ7RTW8 1153 aa18.58■□□□□ 0.56
SMARCB1-204ENST00000407422 LRRC6Q86X45 466 aa18.58■□□□□ 0.56
SMARCB1-204ENST00000407422 LPGAT1Q92604 370 aa18.58■□□□□ 0.56
SMARCB1-204ENST00000407422 FAM136AQ96C01 138 aa18.58■□□□□ 0.56
SMARCB1-204ENST00000407422 IL1RAPL1Q9NZN1 696 aa18.58■□□□□ 0.56
SMARCB1-204ENST00000407422 PCSK5Q92824 1860 aa18.58■□□□□ 0.56
SMARCB1-204ENST00000407422 CBSLP0DN79 551 aa18.57■□□□□ 0.56
SMARCB1-204ENST00000407422 CBSP35520 551 aa18.57■□□□□ 0.56
SMARCB1-204ENST00000407422 NCF4Q15080 339 aa18.57■□□□□ 0.56
SMARCB1-204ENST00000407422 TYSND1Q2T9J0 566 aa18.57■□□□□ 0.56
SMARCB1-204ENST00000407422 MRNIPQ6NTE8 343 aa18.57■□□□□ 0.56
SMARCB1-204ENST00000407422 ASB18Q6ZVZ8 466 aa18.57■□□□□ 0.56
SMARCB1-204ENST00000407422 SDCCAG8Q86SQ7 713 aaPredicted RBP18.57■□□□□ 0.56
SMARCB1-204ENST00000407422 ZNF655Q8N720 491 aaPredicted RBP18.57■□□□□ 0.56
SMARCB1-204ENST00000407422 SKA2Q8WVK7 121 aaPredicted RBP18.57■□□□□ 0.56
SMARCB1-204ENST00000407422 PBKQ96KB5 322 aa18.57■□□□□ 0.56
SMARCB1-204ENST00000407422 TSR3Q9UJK0 312 aaKnown RBP18.57■□□□□ 0.56
SMARCB1-204ENST00000407422 CRYL1Q9Y2S2 319 aa18.57■□□□□ 0.56
SMARCB1-204ENST00000407422 PCM1Q15154 2024 aa18.57■□□□□ 0.56
SMARCB1-204ENST00000407422 GOLGA8MH3BSY2 632 aa18.56■□□□□ 0.56
SMARCB1-204ENST00000407422 ZSCAN9O15535 394 aaPredicted RBP18.56■□□□□ 0.56
SMARCB1-204ENST00000407422 NIPSNAP2O75323 286 aa18.56■□□□□ 0.56
SMARCB1-204ENST00000407422 C1orf105O95561 183 aa18.56■□□□□ 0.56
SMARCB1-204ENST00000407422 HBQ1P09105 142 aa18.56■□□□□ 0.56
SMARCB1-204ENST00000407422 BDKRB1P46663 353 aa18.56■□□□□ 0.56
SMARCB1-204ENST00000407422 KIAA0930Q6ICG6 404 aaPredicted RBP18.56■□□□□ 0.56
SMARCB1-204ENST00000407422 CASC4Q6P4E1 433 aa18.56■□□□□ 0.56
SMARCB1-204ENST00000407422 OR2L8Q8NGY9 312 aa18.56■□□□□ 0.56
SMARCB1-204ENST00000407422 GSDMBQ8TAX9 411 aa18.56■□□□□ 0.56
SMARCB1-204ENST00000407422 COG1Q8WTW3 980 aa18.56■□□□□ 0.56
SMARCB1-204ENST00000407422 DPH2Q9BQC3 489 aaPredicted RBP18.56■□□□□ 0.56
SMARCB1-204ENST00000407422 ING2Q9H160 280 aa18.56■□□□□ 0.56
SMARCB1-204ENST00000407422 DHCR7Q9UBM7 475 aaKnown RBP18.56■□□□□ 0.56
SMARCB1-204ENST00000407422 SLC39A10Q9ULF5 831 aa18.56■□□□□ 0.56
SMARCB1-204ENST00000407422 NEU2Q9Y3R4 380 aa18.56■□□□□ 0.56
SMARCB1-204ENST00000407422 AP1M2Q9Y6Q5 423 aa18.56■□□□□ 0.56
SMARCB1-204ENST00000407422 RASGRF2O14827 1237 aa18.56■□□□□ 0.56
SMARCB1-204ENST00000407422 KPNA5O15131 536 aa18.56■□□□□ 0.56
SMARCB1-204ENST00000407422 F7P08709 466 aaPredicted RBP18.56■□□□□ 0.56
SMARCB1-204ENST00000407422 AGXTP21549 392 aa18.56■□□□□ 0.56
SMARCB1-204ENST00000407422 COILP38432 576 aaPredicted RBP18.56■□□□□ 0.56
SMARCB1-204ENST00000407422 CCL11P51671 97 aa18.56■□□□□ 0.56
SMARCB1-204ENST00000407422 SARNPP82979 210 aaKnown RBP18.56■□□□□ 0.56
SMARCB1-204ENST00000407422 KLRB1Q12918 225 aa18.56■□□□□ 0.56
SMARCB1-204ENST00000407422 IGFBP7Q16270 282 aa18.56■□□□□ 0.56
SMARCB1-204ENST00000407422 CYP1B1Q16678 543 aa18.56■□□□□ 0.56
SMARCB1-204ENST00000407422 RHBDD2Q6NTF9 364 aa18.56■□□□□ 0.56
SMARCB1-204ENST00000407422 CNSTQ6PJW8 725 aa18.56■□□□□ 0.56
SMARCB1-204ENST00000407422 CCDC137Q6PK04 289 aaKnown RBP18.56■□□□□ 0.56
SMARCB1-204ENST00000407422 REXO1L1PQ8IX06 675 aa18.56■□□□□ 0.56
SMARCB1-204ENST00000407422 GBP5Q96PP8 586 aa18.56■□□□□ 0.56
SMARCB1-204ENST00000407422 IRAK4Q9NWZ3 460 aa18.56■□□□□ 0.56
SMARCB1-204ENST00000407422 GALPQ9UBC7 116 aa18.56■□□□□ 0.56
SMARCB1-204ENST00000407422 PLCL2Q9UPR0 1127 aa18.56■□□□□ 0.56
SMARCB1-204ENST00000407422 C9J4A7 227 aa18.55■□□□□ 0.56
SMARCB1-204ENST00000407422 KLF7O75840 302 aaPredicted RBP18.55■□□□□ 0.56
SMARCB1-204ENST00000407422 S1PR4O95977 384 aa18.55■□□□□ 0.56
SMARCB1-204ENST00000407422 GRIA3P42263 894 aa18.55■□□□□ 0.56
SMARCB1-204ENST00000407422 SLC9A5Q14940 896 aa18.55■□□□□ 0.56
SMARCB1-204ENST00000407422 CENPUQ71F23 418 aa18.55■□□□□ 0.56
SMARCB1-204ENST00000407422 SLC35F6Q8N357 371 aa18.55■□□□□ 0.56
SMARCB1-204ENST00000407422 ZBTB2Q8N680 514 aa18.55■□□□□ 0.56
SMARCB1-204ENST00000407422 SLC22A18Q96BI1 424 aa18.55■□□□□ 0.56
SMARCB1-204ENST00000407422 TCF12Q99081 682 aa18.55■□□□□ 0.56
SMARCB1-204ENST00000407422 ACSS2Q9NR19 701 aa18.55■□□□□ 0.56
SMARCB1-204ENST00000407422 EURLQ9NYK6 297 aa18.55■□□□□ 0.56
SMARCB1-204ENST00000407422 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.55■□□□□ 0.56
SMARCB1-204ENST00000407422 PGRMC1O00264 195 aaKnown RBP18.54■□□□□ 0.56
SMARCB1-204ENST00000407422 PRICKLE3O43900 615 aaPredicted RBP18.54■□□□□ 0.56
SMARCB1-204ENST00000407422 FOXL2P58012 376 aa18.54■□□□□ 0.56
SMARCB1-204ENST00000407422 SF1Q15637 639 aaKnown RBP18.54■□□□□ 0.56
SMARCB1-204ENST00000407422 RNF187Q5TA31 235 aaPredicted RBP18.54■□□□□ 0.56
SMARCB1-204ENST00000407422 MLIPQ5VWP3 458 aa18.54■□□□□ 0.56
SMARCB1-204ENST00000407422 FCRL6Q6DN72 434 aa18.54■□□□□ 0.56
SMARCB1-204ENST00000407422 NEPROQ6NW34 567 aa18.54■□□□□ 0.56
SMARCB1-204ENST00000407422 TTC23LQ6PF05 361 aa18.54■□□□□ 0.56
SMARCB1-204ENST00000407422 CILP2Q8IUL8 1156 aa18.54■□□□□ 0.56
SMARCB1-204ENST00000407422 SPNS2Q8IVW8 549 aa18.54■□□□□ 0.56
SMARCB1-204ENST00000407422 AGGF1Q8N302 714 aaeCLIP18.54■□□□□ 0.56
SMARCB1-204ENST00000407422 TEX19Q8NA77 164 aa18.54■□□□□ 0.56
SMARCB1-204ENST00000407422 DENND1AQ8TEH3 1009 aa18.54■□□□□ 0.56
SMARCB1-204ENST00000407422 RAD51AP1Q96B01 352 aa18.54■□□□□ 0.56
SMARCB1-204ENST00000407422 SAMD15Q9P1V8 674 aa18.54■□□□□ 0.56
SMARCB1-204ENST00000407422 PTPN13Q12923 2485 aa18.54■□□□□ 0.56
SMARCB1-204ENST00000407422 RP1L1Q8IWN7 2480 aaPredicted RBP18.54■□□□□ 0.56
SMARCB1-204ENST00000407422 ESR1P03372 595 aa18.53■□□□□ 0.56
SMARCB1-204ENST00000407422 CHRM3P20309 590 aa18.53■□□□□ 0.56
SMARCB1-204ENST00000407422 OGNP20774 298 aaKnown RBP18.53■□□□□ 0.56
SMARCB1-204ENST00000407422 PSMB5P28074 263 aa18.53■□□□□ 0.56
SMARCB1-204ENST00000407422 ADARP55265 1226 aaKnown RBP18.53■□□□□ 0.56
SMARCB1-204ENST00000407422 DHX34Q14147 1143 aaKnown RBP18.53■□□□□ 0.56
SMARCB1-204ENST00000407422 GBX1Q14549 363 aa18.53■□□□□ 0.56
SMARCB1-204ENST00000407422 ANKRD20A4Q4UJ75 823 aa18.53■□□□□ 0.56
SMARCB1-204ENST00000407422 TLDC1Q6P9B6 456 aa18.53■□□□□ 0.56
SMARCB1-204ENST00000407422 MCATQ8IVS2 390 aaKnown RBP18.53■□□□□ 0.56
SMARCB1-204ENST00000407422 TMEM151BQ8IW70 566 aa18.53■□□□□ 0.56
SMARCB1-204ENST00000407422 MCUQ8NE86 351 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms