RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 KAT8Q9H7Z6 458 aaKnown RBP19.38■□□□□ 0.69
CCDC47-202ENST00000403162 DAPK2Q9UIK4 370 aa19.38■□□□□ 0.69
CCDC47-202ENST00000403162 PCDHB1Q9Y5F3 818 aa19.38■□□□□ 0.69
CCDC47-202ENST00000403162 PCDHGC4Q9Y5F7 938 aa19.38■□□□□ 0.69
CCDC47-202ENST00000403162 ORC6Q9Y5N6 252 aa19.38■□□□□ 0.69
CCDC47-202ENST00000403162 LAMA2P24043 3122 aaKnown RBP19.38■□□□□ 0.69
CCDC47-202ENST00000403162 SLC22A1O15245 554 aa19.37■□□□□ 0.69
CCDC47-202ENST00000403162 ACSL4O60488 711 aa19.37■□□□□ 0.69
CCDC47-202ENST00000403162 TLR5O60602 858 aa19.37■□□□□ 0.69
CCDC47-202ENST00000403162 E2F6O75461 281 aa19.37■□□□□ 0.69
CCDC47-202ENST00000403162 MYOGP15173 224 aa19.37■□□□□ 0.69
CCDC47-202ENST00000403162 CDK5R2Q13319 367 aa19.37■□□□□ 0.69
CCDC47-202ENST00000403162 SPANXN4Q5MJ08 99 aa19.37■□□□□ 0.69
CCDC47-202ENST00000403162 FAM109BQ6ICB4 259 aaPredicted RBP19.37■□□□□ 0.69
CCDC47-202ENST00000403162 TAS2R42Q7RTR8 314 aa19.37■□□□□ 0.69
CCDC47-202ENST00000403162 CALHM3Q86XJ0 350 aa19.37■□□□□ 0.69
CCDC47-202ENST00000403162 EFHBQ8N7U6 833 aa19.37■□□□□ 0.69
CCDC47-202ENST00000403162 FRS2Q8WU20 508 aa19.37■□□□□ 0.69
CCDC47-202ENST00000403162 CEP295NLQ96MC4 621 aa19.37■□□□□ 0.69
CCDC47-202ENST00000403162 ZNF641Q96N77 438 aaPredicted RBP19.37■□□□□ 0.69
CCDC47-202ENST00000403162 TBCDQ9BTW9 1192 aa19.37■□□□□ 0.69
CCDC47-202ENST00000403162 ATAD3AQ9NVI7 634 aa19.37■□□□□ 0.69
CCDC47-202ENST00000403162 MTRRQ9UBK8 725 aa19.37■□□□□ 0.69
CCDC47-202ENST00000403162 ZMYM5Q9UJ78 669 aa19.37■□□□□ 0.69
CCDC47-202ENST00000403162 SLC27A5Q9Y2P5 690 aa19.37■□□□□ 0.69
CCDC47-202ENST00000403162 ZFP37Q9Y6Q3 630 aaPredicted RBP19.37■□□□□ 0.69
CCDC47-202ENST00000403162 KRBA1A5PL33 1030 aa19.37■□□□□ 0.69
CCDC47-202ENST00000403162 PTGES3LE9PB15 166 aa19.37■□□□□ 0.69
CCDC47-202ENST00000403162 PRMT5O14744 637 aaPredicted RBP19.37■□□□□ 0.69
CCDC47-202ENST00000403162 BCKDKO14874 412 aa19.37■□□□□ 0.69
CCDC47-202ENST00000403162 TAPBPO15533 448 aa19.37■□□□□ 0.69
CCDC47-202ENST00000403162 WDR47O94967 919 aa19.37■□□□□ 0.69
CCDC47-202ENST00000403162 ZDHHC11BP0C7U3 371 aa19.37■□□□□ 0.69
CCDC47-202ENST00000403162 RPL17P18621 184 aaKnown RBP19.37■□□□□ 0.69
CCDC47-202ENST00000403162 NR4A1P22736 598 aa19.37■□□□□ 0.69
CCDC47-202ENST00000403162 ACVR2AP27037 513 aa19.37■□□□□ 0.69
CCDC47-202ENST00000403162 CTNNB1P35222 781 aa19.37■□□□□ 0.69
CCDC47-202ENST00000403162 EMX1Q04741 257 aaPredicted RBP19.37■□□□□ 0.69
CCDC47-202ENST00000403162 CACHD1Q5VU97 1274 aa19.37■□□□□ 0.69
CCDC47-202ENST00000403162 BTLAQ7Z6A9 289 aa19.37■□□□□ 0.69
CCDC47-202ENST00000403162 LIX1Q8N485 282 aa19.37■□□□□ 0.69
CCDC47-202ENST00000403162 NSUN3Q9H649 340 aaKnown RBP19.37■□□□□ 0.69
CCDC47-202ENST00000403162 NECTIN3Q9NQS3 549 aa19.37■□□□□ 0.69
CCDC47-202ENST00000403162 FNDC3AQ9Y2H6 1198 aaKnown RBP19.37■□□□□ 0.69
CCDC47-202ENST00000403162 URODP06132 367 aa19.36■□□□□ 0.69
CCDC47-202ENST00000403162 PRKACGP22612 351 aa19.36■□□□□ 0.69
CCDC47-202ENST00000403162 HPCAL1P37235 193 aa19.36■□□□□ 0.69
CCDC47-202ENST00000403162 HSPA7P48741 367 aa19.36■□□□□ 0.69
CCDC47-202ENST00000403162 CACNG1Q06432 222 aa19.36■□□□□ 0.69
CCDC47-202ENST00000403162 TRIM46Q7Z4K8 759 aa19.36■□□□□ 0.69
CCDC47-202ENST00000403162 SLCO6A1Q86UG4 719 aa19.36■□□□□ 0.69
CCDC47-202ENST00000403162 CHPFQ8IZ52 775 aa19.36■□□□□ 0.69
CCDC47-202ENST00000403162 FBXO22Q8NEZ5 403 aa19.36■□□□□ 0.69
CCDC47-202ENST00000403162 NCLNQ969V3 563 aa19.36■□□□□ 0.69
CCDC47-202ENST00000403162 SPATA17Q96L03 361 aa19.36■□□□□ 0.69
CCDC47-202ENST00000403162 ELOVL2Q9NXB9 296 aa19.36■□□□□ 0.69
CCDC47-202ENST00000403162 OARD1Q9Y530 152 aa19.36■□□□□ 0.69
CCDC47-202ENST00000403162 LINC01553A4QN01 128 aa19.36■□□□□ 0.69
CCDC47-202ENST00000403162 RECQL5O94762 991 aaPredicted RBP19.36■□□□□ 0.69
CCDC47-202ENST00000403162 GNPDA1P46926 289 aa19.36■□□□□ 0.69
CCDC47-202ENST00000403162 GZMMP51124 257 aa19.36■□□□□ 0.69
CCDC47-202ENST00000403162 OR7A2PQ8NGA2 310 aa19.36■□□□□ 0.69
CCDC47-202ENST00000403162 TBC1D20Q96BZ9 403 aa19.36■□□□□ 0.69
CCDC47-202ENST00000403162 CCDC90BQ9GZT6 254 aa19.36■□□□□ 0.69
CCDC47-202ENST00000403162 INTS6Q9UL03 887 aaKnown RBP19.36■□□□□ 0.69
CCDC47-202ENST00000403162 BACE2Q9Y5Z0 518 aa19.36■□□□□ 0.69
CCDC47-202ENST00000403162 ILVBLA1L0T0 632 aa19.35■□□□□ 0.69
CCDC47-202ENST00000403162 AXIN1O15169 862 aa19.35■□□□□ 0.69
CCDC47-202ENST00000403162 ADAM12O43184 909 aa19.35■□□□□ 0.69
CCDC47-202ENST00000403162 SERPINA1P01009 418 aa19.35■□□□□ 0.69
CCDC47-202ENST00000403162 JUNDP17535 347 aa19.35■□□□□ 0.69
CCDC47-202ENST00000403162 BMPR1AP36894 532 aa19.35■□□□□ 0.69
CCDC47-202ENST00000403162 HALP42357 657 aa19.35■□□□□ 0.69
CCDC47-202ENST00000403162 PPP1R8Q12972 351 aaKnown RBP19.35■□□□□ 0.69
CCDC47-202ENST00000403162 RAPSNQ13702 412 aa19.35■□□□□ 0.69
CCDC47-202ENST00000403162 DNAJC14Q6Y2X3 702 aaPredicted RBP19.35■□□□□ 0.69
CCDC47-202ENST00000403162 GCNT7Q6ZNI0 430 aa19.35■□□□□ 0.69
CCDC47-202ENST00000403162 NAT16Q8N8M0 369 aa19.35■□□□□ 0.69
CCDC47-202ENST00000403162 SETD9Q8NE22 299 aa19.35■□□□□ 0.69
CCDC47-202ENST00000403162 AUTS2Q8WXX7 1259 aa19.35■□□□□ 0.69
CCDC47-202ENST00000403162 REXO5Q96IC2 774 aaKnown RBP19.35■□□□□ 0.69
CCDC47-202ENST00000403162 OR52E6Q96RD3 313 aa19.35■□□□□ 0.69
CCDC47-202ENST00000403162 CPPED1Q9BRF8 314 aaPredicted RBP19.35■□□□□ 0.69
CCDC47-202ENST00000403162 GABARAPL1Q9H0R8 117 aa19.35■□□□□ 0.69
CCDC47-202ENST00000403162 PLXNA4Q9HCM2 1894 aa19.35■□□□□ 0.69
CCDC47-202ENST00000403162 ERN1O75460 977 aaKnown RBP19.34■□□□□ 0.69
CCDC47-202ENST00000403162 CLDN11O75508 207 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 ANGPTL1O95841 491 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 PFKLP17858 780 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 OR1D2P34982 312 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 MAGEA2P43356 314 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 VAC14Q08AM6 782 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 GPR17Q13304 367 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 GTDC1Q4AE62 458 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 LRIF1Q5T3J3 769 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 SHQ1Q6PI26 577 aaKnown RBP19.34■□□□□ 0.69
CCDC47-202ENST00000403162 CERS6Q6ZMG9 384 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 RNF19BQ6ZMZ0 732 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 PHACTR4Q8IZ21 702 aa19.34■□□□□ 0.69
CCDC47-202ENST00000403162 KRTCAP2Q8N6L1 136 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms