RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 ZSWIM3Q96MP5 696 aa16.52■□□□□ 0.23
DNMT3A-205ENST00000402667 MTG2Q9H4K7 406 aa16.52■□□□□ 0.23
DNMT3A-205ENST00000402667 NTN4Q9HB63 628 aa16.52■□□□□ 0.23
DNMT3A-205ENST00000402667 VCX3AQ9NNX9 186 aa16.52■□□□□ 0.23
DNMT3A-205ENST00000402667 SMPD3Q9NY59 655 aaPredicted RBP16.52■□□□□ 0.23
DNMT3A-205ENST00000402667 INSL6Q9Y581 213 aa16.52■□□□□ 0.23
DNMT3A-205ENST00000402667 RAP2AP10114 183 aa16.51■□□□□ 0.23
DNMT3A-205ENST00000402667 AP1S2P56377 157 aa16.51■□□□□ 0.23
DNMT3A-205ENST00000402667 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.51■□□□□ 0.23
DNMT3A-205ENST00000402667 BORAQ6PGQ7 559 aa16.51■□□□□ 0.23
DNMT3A-205ENST00000402667 SH3GL1Q99961 368 aa16.51■□□□□ 0.23
DNMT3A-205ENST00000402667 RIOK2Q9BVS4 552 aaKnown RBP16.51■□□□□ 0.23
DNMT3A-205ENST00000402667 ATG10Q9H0Y0 220 aa16.51■□□□□ 0.23
DNMT3A-205ENST00000402667 SLC6A13Q9NSD5 602 aa16.51■□□□□ 0.23
DNMT3A-205ENST00000402667 DNAJC11Q9NVH1 559 aa16.51■□□□□ 0.23
DNMT3A-205ENST00000402667 DMTF1Q9Y222 760 aa16.51■□□□□ 0.23
DNMT3A-205ENST00000402667 NOTCH4Q99466 2003 aa16.51■□□□□ 0.23
DNMT3A-205ENST00000402667 TRBV5-3A0A0A0MS03 114 aa16.51■□□□□ 0.23
DNMT3A-205ENST00000402667 FADS2P1A8MWK0 482 aa16.51■□□□□ 0.23
DNMT3A-205ENST00000402667 UPK3BL1B0FP48 263 aa16.51■□□□□ 0.23
DNMT3A-205ENST00000402667 UPK3BL2E5RIL1 263 aa16.51■□□□□ 0.23
DNMT3A-205ENST00000402667 GSTA4O15217 222 aa16.51■□□□□ 0.23
DNMT3A-205ENST00000402667 CTSLP07711 333 aa16.51■□□□□ 0.23
DNMT3A-205ENST00000402667 PRPS2P11908 318 aa16.51■□□□□ 0.23
DNMT3A-205ENST00000402667 PRPH2P23942 346 aa16.51■□□□□ 0.23
DNMT3A-205ENST00000402667 FAM98BQ52LJ0 330 aaKnown RBP16.51■□□□□ 0.23
DNMT3A-205ENST00000402667 NEK10Q6ZWH5 1172 aa16.51■□□□□ 0.23
DNMT3A-205ENST00000402667 ASZ1Q8WWH4 475 aa16.51■□□□□ 0.23
DNMT3A-205ENST00000402667 CARS2Q9HA77 564 aaKnown RBP16.51■□□□□ 0.23
DNMT3A-205ENST00000402667 OR2AG2A6NM03 316 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 UPK1AO00322 258 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 AP2A2O94973 939 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 CLIC3O95833 236 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 TACR1P25103 407 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 WEE1P30291 646 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 NNMTP40261 264 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 GJA8P48165 433 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 ALDH3B2P48448 385 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 CDH15P55291 814 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 TUBA4AP68366 448 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 CHRNB3Q05901 458 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 CYBRD1Q53TN4 286 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 HENMT1Q5T8I9 393 aaKnown RBP16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 TTC33Q6PID6 262 aaPredicted RBP16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 RASGRP3Q8IV61 690 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 ZNF786Q8N393 782 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 DHRSXQ8N5I4 330 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 TRAM1L1Q8N609 369 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 FAM86B1Q8N7N1 296 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 TNIP2Q8NFZ5 429 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 CMTM7Q96FZ5 175 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 APIPQ96GX9 242 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 FBXL20Q96IG2 436 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 TSSK3Q96PN8 268 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 TBCDQ9BTW9 1192 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 PAIP1Q9H074 479 aaKnown RBP16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 CD320Q9NPF0 282 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 ADGRE2Q9UHX3 823 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 INVSQ9Y283 1065 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 PCDHB14Q9Y5E9 798 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 FADS3Q9Y5Q0 445 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 KIAA0100Q14667 2235 aaKnown RBP16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 TSPAN11A1L157 253 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 ELOVL7A1L3X0 281 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 TMEM202A6NGA9 273 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 H3BSA7 217 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 DEAF1O75398 565 aaPredicted RBP16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 SLCO2B1O94956 709 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 PRSS23O95084 383 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 PCNAP12004 261 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 SYN1P17600 705 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 S100A3P33764 101 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 CAPGP40121 348 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 PFN3P60673 137 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 KCTD21Q4G0X4 260 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 TMEM214Q6NUQ4 689 aaKnown RBP16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 PHACTR4Q8IZ21 702 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 DDHD1Q8NEL9 900 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 POF1BQ8WVV4 589 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 SERHLQ9NQF3 203 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 MARK1Q9P0L2 795 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 CXXC1Q9P0U4 656 aaPredicted RBP16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 FAM8A1Q9UBU6 413 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 CEPT1Q9Y6K0 416 aa16.5■□□□□ 0.23
DNMT3A-205ENST00000402667 ERN1O75460 977 aaKnown RBP16.49■□□□□ 0.23
DNMT3A-205ENST00000402667 SNAP29O95721 258 aa16.49■□□□□ 0.23
DNMT3A-205ENST00000402667 FTH1P02794 183 aa16.49■□□□□ 0.23
DNMT3A-205ENST00000402667 SDC1P18827 310 aa16.49■□□□□ 0.23
DNMT3A-205ENST00000402667 HALP42357 657 aa16.49■□□□□ 0.23
DNMT3A-205ENST00000402667 CHIT1Q13231 466 aa16.49■□□□□ 0.23
DNMT3A-205ENST00000402667 POM121L1PQ3SYA9 428 aa16.49■□□□□ 0.23
DNMT3A-205ENST00000402667 FRG2Q64ET8 278 aa16.49■□□□□ 0.23
DNMT3A-205ENST00000402667 FBXO30Q8TB52 745 aa16.49■□□□□ 0.23
DNMT3A-205ENST00000402667 FBXL8Q96CD0 374 aa16.49■□□□□ 0.23
DNMT3A-205ENST00000402667 TIFAQ96CG3 184 aa16.49■□□□□ 0.23
DNMT3A-205ENST00000402667 FRG2BQ96QU4 278 aa16.49■□□□□ 0.23
DNMT3A-205ENST00000402667 ZSCAN5AQ9BUG6 496 aa16.49■□□□□ 0.23
DNMT3A-205ENST00000402667 UGT2B28Q9BY64 529 aa16.49■□□□□ 0.23
DNMT3A-205ENST00000402667 KCNH6Q9H252 994 aa16.49■□□□□ 0.23
DNMT3A-205ENST00000402667 KAT8Q9H7Z6 458 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms