RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 DNASE1L3Q13609 305 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 CYP2A13Q16696 494 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 ATP13A5Q4VNC0 1218 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 LRRC66Q68CR7 880 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 CXorf57Q6NSI4 855 aaKnown RBP12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 Q6ZPB1 254 aaPredicted RBP12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 P3H2Q8IVL5 708 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 CLECL1Q8IZS7 167 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 CENPSQ8N2Z9 138 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 SLC22A17Q8WUG5 538 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 MAL2Q969L2 176 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 APIPQ96GX9 242 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 RMND5AQ9H871 391 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 ABCB8Q9NUT2 735 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 SCN3BQ9NY72 215 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 SLC25A37Q9NYZ2 338 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 SLCO3A1Q9UIG8 710 aa12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 LSM7Q9UK45 103 aaKnown RBP12.37□□□□□ -0.43
PPP4R1-202ENST00000400555 NYNRINQ9P2P1 1898 aaKnown RBP12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 SELPP16109 830 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 HMGCLP35914 325 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 SEPHS1P49903 392 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 ELAVL2Q12926 359 aaKnown RBP12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 STARD3Q14849 445 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 SPCS2Q15005 226 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 ARTNQ5T4W7 220 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 PRR23BQ6ZRT6 265 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 RBM23Q86U06 439 aaKnown RBP12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 ACAT2Q9BWD1 397 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 AMBRA1Q9C0C7 1298 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 YIPF1Q9Y548 306 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 MYLKQ15746 1914 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 LOC285556D6RIA3 1793 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 FPGTO14772 594 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 TULP3O75386 442 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 ATXN8OSP0DMR3 200 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 SERPINA4P29622 427 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 SOAT1P35610 550 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 CAP1Q01518 475 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 NAE1Q13564 534 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 RGS21Q2M5E4 152 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 SYTL3Q4VX76 610 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 ZCCHC7Q8N3Z6 543 aaKnown RBP12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 SMYD1Q8NB12 490 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 GPR26Q8NDV2 337 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 ACDQ96AP0 544 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 RBM4BQ9BQ04 359 aaKnown RBP12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 RBM4Q9BWF3 364 aaKnown RBP12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 BRINP2Q9C0B6 783 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 C6orf62Q9GZU0 229 aaPredicted RBP12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 ATP13A3Q9H7F0 1226 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 PTBP2Q9UKA9 531 aaKnown RBP12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 TESMINQ9Y4I5 508 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 PCDHB1Q9Y5F3 818 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 SH3PXD2BA1X283 911 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 CA12O43570 354 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 RECQL5O94762 991 aaPredicted RBP12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 PGLSO95336 258 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 DBTP11182 482 aaKnown RBP12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 TTKP33981 857 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 CRATP43155 626 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 KIR3DL1P43629 444 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 EIF2B2P49770 351 aaKnown RBP12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 SP3Q02447 781 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 ACSM2AQ08AH3 577 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 DMC1Q14565 340 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 ACSM2BQ68CK6 577 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.36□□□□□ -0.438e-10■■■■■ 38.8
PPP4R1-202ENST00000400555 PAGE2Q7Z2X7 111 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 SNX20Q7Z614 316 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 BTLAQ7Z6A9 289 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 CROCCP3Q8IVE0 287 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 SPARTQ8N0X7 666 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 PSMA8Q8TAA3 256 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 TBC1D15Q8TC07 691 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 STON2Q8WXE9 905 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 REXO4Q9GZR2 422 aaKnown RBP12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 ABCB10Q9NRK6 738 aa12.36□□□□□ -0.43
PPP4R1-202ENST00000400555 A0A1W2PQ45 241 aaPredicted RBP12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 A0A1W2PQY0 241 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 NPIPB15A6NHN6 443 aaPredicted RBP12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 ABCB7O75027 752 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 NDUFS2O75306 463 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 IGSF6O95976 241 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 ENGP17813 658 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 TGFBR1P36897 503 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 DCTP40126 519 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 MAD2L1Q13257 205 aaPredicted RBP12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 NPTX1Q15818 432 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 CTU2Q2VPK5 515 aaKnown RBP12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 BBS7Q8IWZ6 715 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 COX4I2Q96KJ9 171 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 ITM2CQ9NQX7 267 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 AASDHPPTQ9NRN7 309 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 PSME2Q9UL46 239 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 M0R129 80 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 CR2P20023 1033 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 EPHA2P29317 976 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 CD70P32970 193 aa12.35□□□□□ -0.43
PPP4R1-202ENST00000400555 SPAM1P38567 509 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms