RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 PER3P56645 1201 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 MEF2AQ02078 507 aaPredicted RBP13.49□□□□□ -0.25
VAPA-202ENST00000400000 SLC3A1Q07837 685 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 TSTD2Q5T7W7 516 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 ERICH5Q6P6B1 374 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 ASB18Q6ZVZ8 466 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 AKAP14Q86UN6 197 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 CBR4Q8N4T8 237 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 C12orf76Q8N812 135 aaPredicted RBP13.49□□□□□ -0.25
VAPA-202ENST00000400000 SLC44A1Q8WWI5 657 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 ALOX15BO15296 676 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 ERI3O43414 337 aaKnown RBP13.49□□□□□ -0.25
VAPA-202ENST00000400000 B4GALT4O60513 344 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 HSD3B2P26439 372 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 CASRP41180 1078 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 TAS2R50P59544 299 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 TMEM164Q5U3C3 297 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 GPAT4Q86UL3 456 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 TBC1D21Q8IYX1 336 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 GPN1Q9HCN4 374 aaPredicted RBP13.49□□□□□ -0.25
VAPA-202ENST00000400000 PLCL2Q9UPR0 1127 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 PCDH7O60245 1069 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 PGLSO95336 258 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 SIX3O95343 332 aaPredicted RBP13.49□□□□□ -0.25
VAPA-202ENST00000400000 CLDN7O95471 211 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 S100A6P06703 90 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 IDH3AP50213 366 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 CARD16Q5EG05 197 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 TRIM2Q9C040 744 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 APOBEC3GQ9HC16 384 aaKnown RBP13.49□□□□□ -0.25
VAPA-202ENST00000400000 TRPS1Q9UHF7 1281 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 E7EQ34 232 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 BLOC1S5-TXNDC5H3BN57 136 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 KCNQ1P51787 676 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 E2F2Q14209 437 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 HGSNATQ68CP4 663 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 MBLAC2Q68D91 279 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 GDPD4Q6W3E5 623 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 GALNT10Q86SR1 603 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 ZDHHC21Q8IVQ6 265 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 PHC3Q8NDX5 983 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 AGXT2Q9BYV1 514 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 LHX5Q9H2C1 402 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 S100A14Q9HCY8 104 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 RWDD3Q9Y3V2 267 aa13.49□□□□□ -0.25
VAPA-202ENST00000400000 FAM237AA0A1B0GTK4 181 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 PPEF2O14830 753 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 IFI30P13284 250 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 CCNCP24863 283 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 SDC2P34741 201 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 ASMTP46597 345 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 CHRNA6Q15825 494 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 RNF220Q5VTB9 566 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 SLC9A4Q6AI14 798 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 CRTC1Q6UUV9 634 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 PLA2G15Q8NCC3 412 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 IL4I1Q96RQ9 567 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 PKP4Q99569 1192 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 PCDHAC1Q9H158 963 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 RNF39Q9H2S5 420 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 FBXW11Q9UKB1 542 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 HCN2Q9UL51 889 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 PLEKHA6Q9Y2H5 1048 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 ZNF860A6NHJ4 632 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 TRIM64BA6NI03 449 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 CXCR6O00574 342 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 BCHEP06276 602 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 THRBP10828 461 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 AGXTP21549 392 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 GDF5P43026 501 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 RAB8AP61006 207 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 TRMT10BQ6PF06 316 aaKnown RBP13.48□□□□□ -0.25
VAPA-202ENST00000400000 CMTM8Q8IZV2 173 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 PXYLP1Q8TE99 480 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 LENG8Q96PV6 779 aaPredicted RBP13.48□□□□□ -0.25
VAPA-202ENST00000400000 RBM4BQ9BQ04 359 aaKnown RBP13.48□□□□□ -0.25
VAPA-202ENST00000400000 ZSCAN5AQ9BUG6 496 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 RBM4Q9BWF3 364 aaKnown RBP13.48□□□□□ -0.25
VAPA-202ENST00000400000 ZNF395Q9H8N7 513 aaPredicted RBP13.48□□□□□ -0.25
VAPA-202ENST00000400000 DERAQ9Y315 318 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 COL1A2P08123 1366 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 RENP00797 406 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 JMJD7P0C870 316 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 MMP8P22894 467 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 EDNRAP25101 427 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 SEMA3AQ14563 771 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 SLC9B1Q4ZJI4 515 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 MSANTD1Q6ZTZ1 278 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 PQLC1Q8N2U9 271 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 SYNPOQ8N3V7 929 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 ADAD1Q96M93 576 aaKnown RBP13.48□□□□□ -0.25
VAPA-202ENST00000400000 ZSWIM3Q96MP5 696 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 ACBD6Q9BR61 282 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 BCO2Q9BYV7 579 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 METTL7AQ9H8H3 244 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 SPATA6Q9NWH7 488 aaPredicted RBP13.48□□□□□ -0.25
VAPA-202ENST00000400000 RHCGQ9UBD6 479 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 FBXL3Q9UKT7 428 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 SNX7Q9UNH6 387 aa13.48□□□□□ -0.25
VAPA-202ENST00000400000 FARSAQ9Y285 508 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms