RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 SIDT2Q8NBJ9 832 aaKnown RBP7.29□□□□□ -1.24
USP16-204ENST00000399976 STAG3L4Q8TBR4 150 aa7.29□□□□□ -1.24
USP16-204ENST00000399976 NXPE2Q96DL1 559 aa7.29□□□□□ -1.24
USP16-204ENST00000399976 LINGO1Q96FE5 620 aa7.29□□□□□ -1.24
USP16-204ENST00000399976 TCTN2Q96GX1 697 aa7.29□□□□□ -1.24
USP16-204ENST00000399976 FERD3LQ96RJ6 166 aa7.29□□□□□ -1.24
USP16-204ENST00000399976 MIPEPQ99797 713 aa7.29□□□□□ -1.24
USP16-204ENST00000399976 CNOT10Q9H9A5 744 aaKnown RBP7.29□□□□□ -1.24
USP16-204ENST00000399976 SNX15Q9NRS6 342 aa7.29□□□□□ -1.24
USP16-204ENST00000399976 IGSF5Q9NSI5 407 aa7.29□□□□□ -1.24
USP16-204ENST00000399976 DCDC2Q9UHG0 476 aa7.29□□□□□ -1.24
USP16-204ENST00000399976 PCDHB11Q9Y5F2 797 aa7.29□□□□□ -1.24
USP16-204ENST00000399976 VCANP13611 3396 aa7.29□□□□□ -1.24
USP16-204ENST00000399976 PCNX2A6NKB5 2137 aa7.29□□□□□ -1.24
USP16-204ENST00000399976 CDRT15L2A8MXV6 281 aa7.29□□□□□ -1.24
USP16-204ENST00000399976 ZBTB11O95625 1053 aaPredicted RBP7.29□□□□□ -1.24
USP16-204ENST00000399976 CD63P08962 238 aa7.29□□□□□ -1.24
USP16-204ENST00000399976 NELFEP18615 380 aaKnown RBP7.29□□□□□ -1.24
USP16-204ENST00000399976 CSF2RBP32927 897 aa7.29□□□□□ -1.24
USP16-204ENST00000399976 PREPP48147 710 aa7.29□□□□□ -1.24
USP16-204ENST00000399976 SIM1P81133 766 aaPredicted RBP7.29□□□□□ -1.24
USP16-204ENST00000399976 ACY1Q03154 408 aa7.29□□□□□ -1.24
USP16-204ENST00000399976 HSPA14Q0VDF9 509 aa7.29□□□□□ -1.24
USP16-204ENST00000399976 USP10Q14694 798 aaKnown RBP7.29□□□□□ -1.24
USP16-204ENST00000399976 ERCC6LQ2NKX8 1250 aa7.29□□□□□ -1.24
USP16-204ENST00000399976 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.29□□□□□ -1.24
USP16-204ENST00000399976 CRTC2Q53ET0 693 aaPredicted RBP7.29□□□□□ -1.24
USP16-204ENST00000399976 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.29□□□□□ -1.24
USP16-204ENST00000399976 SPESP1Q6UW49 350 aa7.29□□□□□ -1.24
USP16-204ENST00000399976 RNF44Q7L0R7 432 aa7.29□□□□□ -1.24
USP16-204ENST00000399976 TBC1D1Q86TI0 1168 aaPredicted RBP7.29□□□□□ -1.24
USP16-204ENST00000399976 BMPERQ8N8U9 685 aa7.29□□□□□ -1.24
USP16-204ENST00000399976 C7orf57Q8NEG2 295 aa7.29□□□□□ -1.24
USP16-204ENST00000399976 OR4K1Q8NGD4 311 aa7.29□□□□□ -1.24
USP16-204ENST00000399976 LCN9Q8WX39 176 aa7.29□□□□□ -1.24
USP16-204ENST00000399976 CCDC126Q96EE4 140 aa7.29□□□□□ -1.24
USP16-204ENST00000399976 ZNF578Q96N58 590 aaPredicted RBP7.29□□□□□ -1.24
USP16-204ENST00000399976 GPR78Q96P69 363 aa7.29□□□□□ -1.24
USP16-204ENST00000399976 DPH2Q9BQC3 489 aaPredicted RBP7.29□□□□□ -1.24
USP16-204ENST00000399976 SRMSQ9H3Y6 488 aa7.29□□□□□ -1.24
USP16-204ENST00000399976 CTNNAL1Q9UBT7 734 aa7.29□□□□□ -1.24
USP16-204ENST00000399976 PRKAB1Q9Y478 270 aa7.29□□□□□ -1.24
USP16-204ENST00000399976 TNPO3Q9Y5L0 923 aaKnown RBP7.29□□□□□ -1.24
USP16-204ENST00000399976 IGHV5-10-1A0A0J9YXX1 117 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 FITM1A5D6W6 292 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 GOLGA8KD6RF30 607 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 GOLGA8TH3BQL2 631 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 TXNDC9O14530 226 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 RFPL1O75677 317 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 CAPNS1P04632 268 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 HBQ1P09105 142 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 HIST1H2AGP0C0S8 130 aaPredicted RBP7.28□□□□□ -1.24
USP16-204ENST00000399976 H2AFXP16104 143 aaPredicted RBP7.28□□□□□ -1.24
USP16-204ENST00000399976 HIST1H2ADP20671 130 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 PBLDP30039 288 aaPredicted RBP7.28□□□□□ -1.24
USP16-204ENST00000399976 MRPS25P82663 173 aaKnown RBP7.28□□□□□ -1.24
USP16-204ENST00000399976 NAA30Q147X3 362 aaPredicted RBP7.28□□□□□ -1.24
USP16-204ENST00000399976 PCBP2Q15366 365 aaKnown RBP eCLIP7.28□□□□□ -1.24
USP16-204ENST00000399976 CCDC153Q494R4 210 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 N4BP2L1Q5TBK1 243 aaPredicted RBP7.28□□□□□ -1.24
USP16-204ENST00000399976 HES3Q5TGS1 186 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 ARMC6Q6NXE6 501 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 TMEM207Q6UWW9 146 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 UBE2R2Q712K3 238 aaPredicted RBP7.28□□□□□ -1.24
USP16-204ENST00000399976 CEP97Q8IW35 865 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 CPNE9Q8IYJ1 553 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 KIRREL3Q8IZU9 778 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 AGBL5Q8NDL9 886 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 ABHD11Q8NFV4 315 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 EEF1AKMT1Q8WVE0 214 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 HIST1H2AHQ96KK5 128 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 OR2A14Q96R47 310 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 ATOH8Q96SQ7 321 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 SLC30A3Q99726 388 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 HIST1H2AJQ99878 128 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 MRPL57Q9BQC6 102 aaKnown RBP7.28□□□□□ -1.24
USP16-204ENST00000399976 H2AFJQ9BTM1 129 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 ARGLU1Q9NWB6 273 aaPredicted RBP7.28□□□□□ -1.24
USP16-204ENST00000399976 ADGRE2Q9UHX3 823 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 PDE10AQ9Y233 779 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 DNAJC16Q9Y2G8 782 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 A0A1W2PPV9 198 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 SERTM1A2A2V5 107 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 BTN3A1O00481 513 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 PCDH17O14917 1159 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 NVLO15381 856 aaKnown RBP7.28□□□□□ -1.24
USP16-204ENST00000399976 SNX2O60749 519 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 GLRA3O75311 464 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 ACSL3O95573 720 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 ANXA5P08758 320 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 EZRP15311 586 aaKnown RBP7.28□□□□□ -1.24
USP16-204ENST00000399976 CRHR1P34998 444 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 GABRA4P48169 554 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 CFHR1Q03591 330 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 TECRLQ5HYJ1 363 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 BEND6Q5SZJ8 279 aaPredicted RBP7.28□□□□□ -1.24
USP16-204ENST00000399976 ZNF425Q6IV72 752 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 CTAGE3PQ8IX95 158 aa7.28□□□□□ -1.24
USP16-204ENST00000399976 CENPLQ8N0S6 344 aaPredicted RBP7.28□□□□□ -1.24
USP16-204ENST00000399976 LILRA3Q8N6C8 439 aaPredicted RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms