RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 VIPR2P41587 438 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 GSSP48637 474 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 E2F1Q01094 437 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 PLP2Q04941 152 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 LRIF1Q5T3J3 769 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 AADACL2Q6P093 401 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 SLC22A15Q8IZD6 547 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 TWIST2Q8WVJ9 160 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 TMEM79Q9BSE2 394 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 UPB1Q9UBR1 384 aa7.78□□□□□ -1.16
USP47-203ENST00000399455 LRRC10BA6NIK2 292 aa7.77□□□□□ -1.16
USP47-203ENST00000399455 TTC34A8MYJ7 566 aa7.77□□□□□ -1.16
USP47-203ENST00000399455 E7EQ34 232 aa7.77□□□□□ -1.16
USP47-203ENST00000399455 GATBO75879 557 aaKnown RBP7.77□□□□□ -1.16
USP47-203ENST00000399455 TSPAN8P19075 237 aa7.77□□□□□ -1.16
USP47-203ENST00000399455 GJA5P36382 358 aa7.77□□□□□ -1.16
USP47-203ENST00000399455 VSX2P58304 361 aaPredicted RBP7.77□□□□□ -1.16
USP47-203ENST00000399455 GBE1Q04446 702 aa7.77□□□□□ -1.16
USP47-203ENST00000399455 BICRALQ6AI39 1079 aa7.77□□□□□ -1.16
USP47-203ENST00000399455 ZNF662Q6ZS27 426 aa7.77□□□□□ -1.16
USP47-203ENST00000399455 IRF2BP2Q7Z5L9 587 aa7.77□□□□□ -1.16
USP47-203ENST00000399455 DNAJC9Q8WXX5 260 aa7.77□□□□□ -1.16
USP47-203ENST00000399455 SPOCK2Q92563 424 aa7.77□□□□□ -1.16
USP47-203ENST00000399455 PCDHB18PQ96TA0 734 aa7.77□□□□□ -1.16
USP47-203ENST00000399455 SLC17A9Q9BYT1 436 aa7.77□□□□□ -1.16
USP47-203ENST00000399455 IKZF2Q9UKS7 526 aa7.77□□□□□ -1.16
USP47-203ENST00000399455 DCXO43602 365 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 PCDH7O60245 1069 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 BCAS2O75934 225 aaPredicted RBP7.77□□□□□ -1.17
USP47-203ENST00000399455 MPP1Q00013 466 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 DSC1Q08554 894 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 AMIGO3Q86WK7 504 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 CPNE9Q8IYJ1 553 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 TMEM234Q8WY98 164 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 EZH1Q92800 747 aaPredicted RBP7.77□□□□□ -1.17
USP47-203ENST00000399455 HOPXQ9BPY8 73 aaPredicted RBP7.77□□□□□ -1.17
USP47-203ENST00000399455 G6PC3Q9BUM1 346 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 CPEB1Q9BZB8 566 aaKnown RBP7.77□□□□□ -1.17
USP47-203ENST00000399455 CHRAC1Q9NRG0 131 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 FARSBQ9NSD9 589 aaKnown RBP7.77□□□□□ -1.17
USP47-203ENST00000399455 HSFX1Q9UBD0 423 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 GNEQ9Y223 722 aaKnown RBP7.77□□□□□ -1.17
USP47-203ENST00000399455 MED31Q9Y3C7 131 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 HYKKA2RU49 373 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 ANKRD66B4E2M5 251 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 MID1O15344 667 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 NMBRP28336 390 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 HSD11B1P28845 292 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 DEFB103AP81534 67 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 RHAGQ02094 409 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 PRKD1Q15139 912 aaPredicted RBP7.77□□□□□ -1.17
USP47-203ENST00000399455 ZBTB6Q15916 424 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 DPY19L1Q2PZI1 675 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 OTUD3Q5T2D3 398 aaPredicted RBP7.77□□□□□ -1.17
USP47-203ENST00000399455 THOC6Q86W42 341 aaKnown RBP7.77□□□□□ -1.17
USP47-203ENST00000399455 OR56A1Q8NGH5 318 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 FEM1AQ9BSK4 669 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 ACSS3Q9H6R3 686 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 HAS3O00219 553 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 PCDHGA12O60330 932 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 CDC40O60508 579 aaKnown RBP eCLIP7.77□□□□□ -1.17
USP47-203ENST00000399455 LYPLA1O75608 230 aaPredicted RBP7.77□□□□□ -1.17
USP47-203ENST00000399455 OAZ2O95190 189 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 GALK2Q01415 458 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 SEMA3AQ14563 771 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 ASPGQ86U10 573 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 HEATR4Q86WZ0 1026 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 C10orf107Q8IVU9 208 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 C8orf59Q8N0T1 100 aaPredicted RBP7.77□□□□□ -1.17
USP47-203ENST00000399455 OR6Y1Q8NGX8 325 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 OR4C6Q8NH72 309 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 C14orf105Q9NVL8 296 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 OGDHLQ9ULD0 1010 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 PAIP2BQ9ULR5 123 aaKnown RBP7.77□□□□□ -1.17
USP47-203ENST00000399455 ERGIC3Q9Y282 383 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 TRPM3Q9HCF6 1732 aaPredicted RBP7.77□□□□□ -1.17
USP47-203ENST00000399455 CCDC162PA2VCL2 907 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 IGLON5A6NGN9 336 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 CRHR1P34998 444 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 ACVRL1P37023 503 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 TMEM115Q12893 351 aaPredicted RBP7.77□□□□□ -1.17
USP47-203ENST00000399455 RCAN2Q14206 197 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 SLC13A3Q8WWT9 602 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 TSACCQ96A04 125 aaPredicted RBP7.77□□□□□ -1.17
USP47-203ENST00000399455 PDLIM2Q96JY6 352 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 MARK4Q96L34 752 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 EBPLQ9BY08 206 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 CAB39LQ9H9S4 337 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 TBC1D17Q9HA65 648 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 PDLIM7Q9NR12 457 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 MRPL39Q9NYK5 338 aaKnown RBP7.77□□□□□ -1.17
USP47-203ENST00000399455 TMPRSS11EQ9UL52 423 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 KHDRBS3O75525 346 aaKnown RBP7.77□□□□□ -1.17
USP47-203ENST00000399455 PAPSS2O95340 614 aaPredicted RBP7.77□□□□□ -1.17
USP47-203ENST00000399455 UGT1A4P22310 534 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 UGT1A3P35503 534 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 ARHGDIBP52566 201 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 NFKB2Q00653 900 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 HHEXQ03014 270 aa7.77□□□□□ -1.17
USP47-203ENST00000399455 SYPL2Q5VXT5 272 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms