RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 ARHGEF33A8MVX0 844 aa13.96□□□□□ -0.17
PCDHA11-201ENST00000398640 KHNYNO15037 678 aaKnown RBP13.96□□□□□ -0.17
PCDHA11-201ENST00000398640 TRAP1Q12931 704 aaKnown RBP13.96□□□□□ -0.17
PCDHA11-201ENST00000398640 SLC1A5Q15758 541 aa13.96□□□□□ -0.17
PCDHA11-201ENST00000398640 SLC22A15Q8IZD6 547 aa13.96□□□□□ -0.17
PCDHA11-201ENST00000398640 CMTM8Q8IZV2 173 aa13.96□□□□□ -0.17
PCDHA11-201ENST00000398640 TMEM156Q8N614 296 aa13.96□□□□□ -0.17
PCDHA11-201ENST00000398640 TMEM145Q8NBT3 493 aa13.96□□□□□ -0.17
PCDHA11-201ENST00000398640 BAZ2AQ9UIF9 1905 aaKnown RBP13.96□□□□□ -0.17
PCDHA11-201ENST00000398640 SCN7AQ01118 1682 aa13.96□□□□□ -0.17
PCDHA11-201ENST00000398640 THSD7AQ9UPZ6 1657 aa13.96□□□□□ -0.17
PCDHA11-201ENST00000398640 LOC110117498-PIK3R3F6TDL0 507 aa13.96□□□□□ -0.17
PCDHA11-201ENST00000398640 LY6G5CQ5SRR4 150 aa13.96□□□□□ -0.17
PCDHA11-201ENST00000398640 TMEM126BQ8IUX1 230 aa13.96□□□□□ -0.17
PCDHA11-201ENST00000398640 HIST1H2AAQ96QV6 131 aa13.96□□□□□ -0.17
PCDHA11-201ENST00000398640 DYTNA2CJ06 578 aa13.96□□□□□ -0.18
PCDHA11-201ENST00000398640 NOL4O94818 638 aa13.96□□□□□ -0.18
PCDHA11-201ENST00000398640 IFNW1P05000 195 aa13.96□□□□□ -0.18
PCDHA11-201ENST00000398640 ABHD13Q7L211 337 aa13.96□□□□□ -0.18
PCDHA11-201ENST00000398640 ZNF516Q92618 1163 aa13.96□□□□□ -0.18
PCDHA11-201ENST00000398640 DHRS1Q96LJ7 313 aa13.96□□□□□ -0.18
PCDHA11-201ENST00000398640 SLC17A6Q9P2U8 582 aa13.96□□□□□ -0.18
PCDHA11-201ENST00000398640 PCDHB3Q9Y5E6 796 aa13.96□□□□□ -0.18
PCDHA11-201ENST00000398640 DGKBQ9Y6T7 804 aa13.96□□□□□ -0.18
PCDHA11-201ENST00000398640 BCKDKO14874 412 aa13.96□□□□□ -0.18
PCDHA11-201ENST00000398640 EDF1O60869 148 aaKnown RBP13.96□□□□□ -0.18
PCDHA11-201ENST00000398640 TCF4P15884 667 aa13.96□□□□□ -0.18
PCDHA11-201ENST00000398640 CDH12P55289 794 aa13.96□□□□□ -0.18
PCDHA11-201ENST00000398640 PRR5P85299 388 aa13.96□□□□□ -0.18
PCDHA11-201ENST00000398640 RPL6Q02878 288 aaKnown RBP13.96□□□□□ -0.18
PCDHA11-201ENST00000398640 ARL13AQ5H913 290 aaPredicted RBP13.96□□□□□ -0.18
PCDHA11-201ENST00000398640 NUP54Q7Z3B4 507 aa13.96□□□□□ -0.18
PCDHA11-201ENST00000398640 TBC1D21Q8IYX1 336 aa13.96□□□□□ -0.18
PCDHA11-201ENST00000398640 DGAT2Q96PD7 388 aa13.96□□□□□ -0.18
PCDHA11-201ENST00000398640 SGIP1Q9BQI5 828 aa13.96□□□□□ -0.18
PCDHA11-201ENST00000398640 YIPF4Q9BSR8 244 aa13.96□□□□□ -0.18
PCDHA11-201ENST00000398640 FADS2P1A8MWK0 482 aa13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 PIRO00625 290 aa13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 RFPL2O75678 378 aa13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 METTL18O95568 372 aa13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 TYRP1P17643 537 aa13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 PCBP2Q15366 365 aaKnown RBP eCLIP13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 KIAA1143Q96AT1 154 aaPredicted RBP13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 NUSAP1Q9BXS6 441 aaKnown RBP13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 SUV39H2Q9H5I1 410 aa13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 RSL24D1Q9UHA3 163 aaKnown RBP13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 TMEM98Q9Y2Y6 226 aa13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 LIPEQ05469 1076 aa13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 LPAL2Q16609 132 aa13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 MTERF1Q99551 399 aaKnown RBP13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 MBD2Q9UBB5 411 aa13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 RAPGEFL1Q9UHV5 662 aa13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 PIP5K1BO14986 540 aa13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 DCTN2Q13561 401 aaKnown RBP13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 TLR1Q15399 786 aa13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 ZCCHC12Q6PEW1 402 aa13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 ULK3Q6PHR2 472 aa13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 SATL1Q86VE3 508 aa13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 METTL27Q8N6F8 245 aaPredicted RBP13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 RASGEF1AQ8N9B8 481 aa13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 OR51V1Q9H2C8 321 aa13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 WDR6Q9NNW5 1121 aaKnown RBP13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 CCDC162PA2VCL2 907 aa13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 ZNF208O43345 1280 aa13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 SCNN1AP37088 669 aa13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 CHRNA4P43681 627 aa13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 GDF10P55107 478 aa13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 TAF1AQ15573 450 aaPredicted RBP13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 CYP27C1Q4G0S4 372 aa13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 FSTL4Q6MZW2 842 aa13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 ERICH5Q6P6B1 374 aa13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 RANBP3LQ86VV4 465 aaPredicted RBP13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 PHC3Q8NDX5 983 aa13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 OR2AJ1Q8NGZ0 328 aa13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 NRAPQ86VF7 1730 aa13.95□□□□□ -0.18
PCDHA11-201ENST00000398640 IRGMA1A4Y4 181 aa13.94□□□□□ -0.18
PCDHA11-201ENST00000398640 NDUFS4O43181 175 aa13.94□□□□□ -0.18
PCDHA11-201ENST00000398640 NADKO95544 446 aaPredicted RBP13.94□□□□□ -0.18
PCDHA11-201ENST00000398640 KCNQ1P51787 676 aa13.94□□□□□ -0.18
PCDHA11-201ENST00000398640 CLCNKAP51800 687 aa13.94□□□□□ -0.18
PCDHA11-201ENST00000398640 NCBP2P52298 156 aaKnown RBP eCLIP13.94□□□□□ -0.18
PCDHA11-201ENST00000398640 NR1H2P55055 460 aa13.94□□□□□ -0.18
PCDHA11-201ENST00000398640 RAB25P57735 213 aa13.94□□□□□ -0.18
PCDHA11-201ENST00000398640 UBE2J2Q8N2K1 259 aa13.94□□□□□ -0.18
PCDHA11-201ENST00000398640 DEFB123Q8N688 67 aa13.94□□□□□ -0.18
PCDHA11-201ENST00000398640 PIGXQ8TBF5 258 aa13.94□□□□□ -0.18
PCDHA11-201ENST00000398640 PCBD2Q9H0N5 130 aa13.94□□□□□ -0.18
PCDHA11-201ENST00000398640 GRXCR1A8MXD5 290 aa13.94□□□□□ -0.18
PCDHA11-201ENST00000398640 UGT1A9O60656 530 aa13.94□□□□□ -0.18
PCDHA11-201ENST00000398640 IL7RP16871 459 aa13.94□□□□□ -0.18
PCDHA11-201ENST00000398640 UGT1A6P19224 532 aa13.94□□□□□ -0.18
PCDHA11-201ENST00000398640 UGT1A1P22309 533 aa13.94□□□□□ -0.18
PCDHA11-201ENST00000398640 UGT1A4P22310 534 aa13.94□□□□□ -0.18
PCDHA11-201ENST00000398640 ACADLP28330 430 aa13.94□□□□□ -0.18
PCDHA11-201ENST00000398640 UGT1A3P35503 534 aa13.94□□□□□ -0.18
PCDHA11-201ENST00000398640 PUDPQ08623 228 aa13.94□□□□□ -0.18
PCDHA11-201ENST00000398640 SLCO6A1Q86UG4 719 aa13.94□□□□□ -0.18
PCDHA11-201ENST00000398640 STX12Q86Y82 276 aa13.94□□□□□ -0.18
PCDHA11-201ENST00000398640 MEIOBQ8N635 442 aa13.94□□□□□ -0.18
PCDHA11-201ENST00000398640 BRSK1Q8TDC3 778 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms