RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 CLPPQ16740 277 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-206ENST00000397617 GEN1Q17RS7 908 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 CES3Q6UWW8 571 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 CORO1BQ9BR76 489 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 RSPH9Q9H1X1 276 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-206ENST00000397617 PNPLA3Q9NST1 481 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 TLN1Q9Y490 2541 aaKnown RBP5.72□□□□□ -1.49
PTPRD-206ENST00000397617 NT5C1B-RDH14C9J2C7 533 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 SLC25A14O95258 325 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-206ENST00000397617 PRAMEF12O95522 483 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 CHRNGP07510 517 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 HOXA6P31267 233 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 STT3AP46977 705 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 AP5B1Q2VPB7 878 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 ZNF658BQ4V348 819 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-206ENST00000397617 IL17RCQ8NAC3 791 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 SDCCAG3Q96C92 435 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 CDRT15Q96T59 188 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 SMPD4Q9NXE4 827 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 CD274Q9NZQ7 290 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 ALPK3Q96L96 1907 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 A0A1W2PRU2 124 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 GPR15P49685 360 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 RAB28P51157 221 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 NME5P56597 212 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 PDE7AQ13946 482 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 KIAA0040Q15053 153 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 TAS1R1Q7RTX1 841 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 HIPK1Q86Z02 1210 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 CACNG4Q9UBN1 327 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 ZNF282Q9UDV7 671 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-206ENST00000397617 CRYL1Q9Y2S2 319 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 L3MBTL1Q9Y468 752 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 KIAA1549LQ6ZVL6 1849 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 CCDC163A0A0D9SF12 145 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 BUD23O43709 281 aaKnown RBP5.72□□□□□ -1.49
PTPRD-206ENST00000397617 ITM2AO43736 263 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 AGR2O95994 175 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 ATN1P54259 1190 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-206ENST00000397617 SDHAF4Q5VUM1 108 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 ZCCHC23Q6ZST2 131 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 ADHFE1Q8IWW8 467 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 SETD9Q8NE22 299 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 RCN3Q96D15 328 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 COQ8BQ96D53 544 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 CLMPQ9H6B4 373 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 CAB39LQ9H9S4 337 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 NUDT5Q9UKK9 219 aa5.72□□□□□ -1.49
PTPRD-206ENST00000397617 A0A087WXM4 84 aa5.71□□□□□ -1.49
PTPRD-206ENST00000397617 SUPT3HB4E1H0 165 aa5.71□□□□□ -1.49
PTPRD-206ENST00000397617 NIPSNAP2O75323 286 aa5.71□□□□□ -1.49
PTPRD-206ENST00000397617 CAPN1P07384 714 aa5.71□□□□□ -1.49
PTPRD-206ENST00000397617 KCNC1P48547 511 aa5.71□□□□□ -1.49
PTPRD-206ENST00000397617 SMIM11AP58511 58 aa5.71□□□□□ -1.49
PTPRD-206ENST00000397617 GPM6BQ13491 265 aa5.71□□□□□ -1.49
PTPRD-206ENST00000397617 GTF2H2Q13888 395 aa5.71□□□□□ -1.49
PTPRD-206ENST00000397617 DGKKQ5KSL6 1271 aa5.71□□□□□ -1.49
PTPRD-206ENST00000397617 GTF2H2CQ6P1K8 395 aa5.71□□□□□ -1.49
PTPRD-206ENST00000397617 GPR26Q8NDV2 337 aa5.71□□□□□ -1.49
PTPRD-206ENST00000397617 CLPTM1LQ96KA5 538 aa5.71□□□□□ -1.49
PTPRD-206ENST00000397617 NSUN3Q9H649 340 aaKnown RBP5.71□□□□□ -1.49
PTPRD-206ENST00000397617 FAM50BQ9Y247 325 aa5.71□□□□□ -1.49
PTPRD-206ENST00000397617 NPIPB15A6NHN6 443 aaPredicted RBP5.71□□□□□ -1.49
PTPRD-206ENST00000397617 H3BM21 787 aa5.71□□□□□ -1.49
PTPRD-206ENST00000397617 SMAD6O43541 496 aaKnown RBP5.71□□□□□ -1.49
PTPRD-206ENST00000397617 LDLRP01130 860 aa5.71□□□□□ -1.49
PTPRD-206ENST00000397617 RPL17P18621 184 aaKnown RBP5.71□□□□□ -1.49
PTPRD-206ENST00000397617 RPS14P62263 151 aaKnown RBP5.71□□□□□ -1.49
PTPRD-206ENST00000397617 CHRNB3Q05901 458 aa5.71□□□□□ -1.49
PTPRD-206ENST00000397617 ITCHQ96J02 903 aa5.71□□□□□ -1.49
PTPRD-206ENST00000397617 ALG2Q9H553 416 aa5.71□□□□□ -1.49
PTPRD-206ENST00000397617 TMEM38AQ9H6F2 299 aa5.71□□□□□ -1.49
PTPRD-206ENST00000397617 ZNF334Q9HCZ1 680 aaPredicted RBP5.71□□□□□ -1.49
PTPRD-206ENST00000397617 ARMCX1Q9P291 453 aa5.71□□□□□ -1.49
PTPRD-206ENST00000397617 PLXNB3Q9ULL4 1909 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 ZBBXA8MT70 800 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 E7ENX8 843 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 KMOO15229 486 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 RAP2AP10114 183 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 ZNF10P21506 573 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-206ENST00000397617 EEF1DP29692 281 aaKnown RBP5.71□□□□□ -1.5
PTPRD-206ENST00000397617 CD70P32970 193 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 POLR2JP52435 117 aaKnown RBP5.71□□□□□ -1.5
PTPRD-206ENST00000397617 THOP1P52888 689 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 TAP2Q03519 686 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 MLC1Q15049 377 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 TRIP10Q15642 601 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 NDUFA9Q16795 377 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 ZNF630Q2M218 657 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-206ENST00000397617 AGTRAPQ6RW13 159 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 DNAJC5GQ8N7S2 189 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 EID2BQ96D98 161 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 PIDD1Q9HB75 910 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 DUS2Q9NX74 493 aaKnown RBP5.71□□□□□ -1.5
PTPRD-206ENST00000397617 SNX10Q9Y5X0 201 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 SCN2BO60939 215 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 KRT75O95678 551 aa5.71□□□□□ -1.5
PTPRD-206ENST00000397617 ZNF26P17031 533 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-206ENST00000397617 PUS10Q3MIT2 529 aaKnown RBP5.71□□□□□ -1.5
PTPRD-206ENST00000397617 FUT11Q495W5 492 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms