RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 RGPD3A6NKT7 1758 aaPredicted RBP10.54□□□□□ -0.72
CCDC40-204ENST00000397545 RGPD4Q7Z3J3 1758 aa10.54□□□□□ -0.72
CCDC40-204ENST00000397545 ADAMDEC1O15204 470 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 OR6A2O95222 327 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 SNAI1O95863 264 aaPredicted RBP10.53□□□□□ -0.72
CCDC40-204ENST00000397545 GBAP04062 536 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 IGFBP4P22692 258 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 RYKP34925 604 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 ETV4P43268 484 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 ASMTP46597 345 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 PLA2G16P53816 162 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 SMARCB1Q12824 385 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 PTGR1Q14914 329 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 TLDC1Q6P9B6 456 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 RBM23Q86U06 439 aaKnown RBP10.53□□□□□ -0.72
CCDC40-204ENST00000397545 CHPFQ8IZ52 775 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 ZNF433Q8N7K0 673 aaPredicted RBP10.53□□□□□ -0.72
CCDC40-204ENST00000397545 OR10G6Q8NH81 332 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 SLC9A6Q92581 669 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 FERD3LQ96RJ6 166 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 DUSP26Q9BV47 211 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 POLR2J2Q9GZM3 115 aaKnown RBP10.53□□□□□ -0.72
CCDC40-204ENST00000397545 MAF1Q9H063 256 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 COMMD3Q9UBI1 195 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 CDC14AQ9UNH5 594 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 SLC22A14Q9Y267 594 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 POLR1DQ9Y2S0 133 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 A0A1B0GVG6 124 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 CYP11A1P05108 521 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 HKDC1Q2TB90 917 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 AKIRIN2Q53H80 203 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 SMYD5Q6GMV2 418 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 BHLHB9Q6PI77 547 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 IFNL1Q8IU54 200 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 GLB1L3Q8NCI6 653 aaPredicted RBP10.53□□□□□ -0.72
CCDC40-204ENST00000397545 FCRL4Q96PJ5 515 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 SLITRK2Q9H156 845 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 SP140LQ9H930 580 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 GPC6Q9Y625 555 aaPredicted RBP10.53□□□□□ -0.72
CCDC40-204ENST00000397545 ARID2Q68CP9 1835 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 BOLA2-SMG1P6H3BVE0 249 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 DUSP11O75319 330 aaKnown RBP10.53□□□□□ -0.72
CCDC40-204ENST00000397545 GADD45GO95257 159 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 TGFB1P01137 390 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 IFNA16P05015 189 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 PGRP06401 933 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 ENGP17813 658 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 HCAR3P49019 387 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 MAPK12P53778 367 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 RPS3AP61247 264 aaKnown RBP10.53□□□□□ -0.72
CCDC40-204ENST00000397545 SOX4Q06945 474 aaPredicted RBP10.53□□□□□ -0.72
CCDC40-204ENST00000397545 NANOGP8Q6NSW7 305 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 COLGALT2Q8IYK4 626 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 AP3S1Q92572 193 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 ARHGAP39Q9C0H5 1083 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 RPF2Q9H7B2 306 aaKnown RBP10.53□□□□□ -0.72
CCDC40-204ENST00000397545 NANOGQ9H9S0 305 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 ING3Q9NXR8 418 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 PRORSD1PA6NEY8 169 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 HAS3O00219 553 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 QSOX1O00391 747 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 PLK4O00444 970 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 PER2O15055 1255 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 DYRK3O43781 588 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 XYLBO75191 536 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 TLX1P31314 330 aaPredicted RBP10.53□□□□□ -0.72
CCDC40-204ENST00000397545 VBP1P61758 197 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 SF1Q15637 639 aaKnown RBP10.53□□□□□ -0.72
CCDC40-204ENST00000397545 ZNF792Q3KQV3 632 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 CRTC2Q53ET0 693 aaPredicted RBP10.53□□□□□ -0.72
CCDC40-204ENST00000397545 IFI44LQ53G44 452 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 ZNF678Q5SXM1 525 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 TMEM220Q6QAJ8 160 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 LAPTM4BQ86VI4 370 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 POMGNT2Q8NAT1 580 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 SLC43A3Q8NBI5 491 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 KCTD13Q8WZ19 329 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 TLR6Q9Y2C9 796 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 OR10H1Q9Y4A9 318 aa10.53□□□□□ -0.72
CCDC40-204ENST00000397545 WDR81Q562E7 1941 aa10.52□□□□□ -0.72
CCDC40-204ENST00000397545 LOC100130705A0A1B0GUX0 176 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 UPK3BL1B0FP48 263 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 UPK3BL2E5RIL1 263 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 ATG13O75143 517 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 NME6O75414 186 aaPredicted RBP10.52□□□□□ -0.73
CCDC40-204ENST00000397545 CXCL14O95715 111 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 FGBP02675 491 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 ENO2P09104 434 aaPredicted RBP10.52□□□□□ -0.73
CCDC40-204ENST00000397545 SAGP10523 405 aaPredicted RBP10.52□□□□□ -0.73
CCDC40-204ENST00000397545 GJA1P17302 382 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 MYL9P24844 172 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 NSG1P42857 185 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 ARSFP54793 590 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 KCNAB2Q13303 367 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 CHRNA6Q15825 494 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 TRNP1Q6NT89 227 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 MED27Q6P2C8 311 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 SMARCD3Q6STE5 483 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 SLC15A3Q8IY34 581 aa10.52□□□□□ -0.73
CCDC40-204ENST00000397545 ZNF366Q8N895 744 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms