RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 TRMUO75648 421 aaKnown RBP12.11□□□□□ -0.47
SMU1-201ENST00000397149 IFNA10P01566 189 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 ZACNQ401N2 412 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 TRMT2AQ8IZ69 625 aaKnown RBP12.11□□□□□ -0.47
SMU1-201ENST00000397149 SLC39A1Q9NY26 324 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 TRAV6A0A075B6T7 132 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 LCHNA4D1U4 455 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 A8MV72 311 aaPredicted RBP12.11□□□□□ -0.47
SMU1-201ENST00000397149 A8MVJ9 347 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 WDPCPO95876 746 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 IRF2P14316 349 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 PTPN6P29350 595 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 PSMA6P60900 246 aaKnown RBP12.11□□□□□ -0.47
SMU1-201ENST00000397149 ATP6V0D1P61421 351 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 E2F1Q01094 437 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 MPP7Q5T2T1 576 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 CRTC1Q6UUV9 634 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 NYAP1Q6ZVC0 841 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 C4orf19Q8IY42 314 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 SEC14L1Q92503 715 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 MSLNLQ96KJ4 702 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 NELFAQ9H3P2 528 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 FARSBQ9NSD9 589 aaKnown RBP12.11□□□□□ -0.47
SMU1-201ENST00000397149 PCDHGB1Q9Y5G3 927 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 OR4Q2P0C623 313 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 CSTF2P33240 577 aaKnown RBP eCLIP12.11□□□□□ -0.47
SMU1-201ENST00000397149 FOXK1P85037 733 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 OTOP3Q7RTS5 596 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 MARCH9Q86YJ5 346 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 GRPEL2Q8TAA5 225 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 NDRG1Q92597 394 aaKnown RBP12.11□□□□□ -0.47
SMU1-201ENST00000397149 ABHD16BQ9H3Z7 469 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 CORO1CQ9ULV4 474 aaPredicted RBP12.11□□□□□ -0.47
SMU1-201ENST00000397149 PCDHGA8Q9Y5G5 932 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 MANSC4A6NHS7 340 aaPredicted RBP12.11□□□□□ -0.47
SMU1-201ENST00000397149 AIPO00170 330 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 RPLP0P05388 317 aaKnown RBP12.11□□□□□ -0.47
SMU1-201ENST00000397149 ADH7P40394 386 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 MAGEA8P43361 318 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 WNT3AP56704 352 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 MLLT1Q03111 559 aaPredicted RBP12.11□□□□□ -0.47
SMU1-201ENST00000397149 TUSC3Q13454 348 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 PDGFRLQ15198 375 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 C2orf27AQ580R0 203 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 TMPPEQ6ZT21 453 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 KCNK18Q7Z418 384 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 SPATA19Q7Z5L4 167 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 PIGZQ86VD9 579 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 ORAI3Q9BRQ5 295 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 ZNF717Q9BY31 904 aaPredicted RBP12.11□□□□□ -0.47
SMU1-201ENST00000397149 TMEM185BQ9H7F4 350 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 SERTAD4Q9NUC0 356 aa12.11□□□□□ -0.47
SMU1-201ENST00000397149 VILLO15195 856 aa12.1□□□□□ -0.47
SMU1-201ENST00000397149 IFNGR1P15260 489 aa12.1□□□□□ -0.47
SMU1-201ENST00000397149 CORO1AP31146 461 aaKnown RBP12.1□□□□□ -0.47
SMU1-201ENST00000397149 ENPP7Q6UWV6 458 aa12.1□□□□□ -0.47
SMU1-201ENST00000397149 AVL9Q8NBF6 648 aa12.1□□□□□ -0.47
SMU1-201ENST00000397149 SOCS4Q8WXH5 440 aa12.1□□□□□ -0.47
SMU1-201ENST00000397149 IL4I1Q96RQ9 567 aa12.1□□□□□ -0.47
SMU1-201ENST00000397149 GPR21Q99679 349 aa12.1□□□□□ -0.47
SMU1-201ENST00000397149 GLOD4Q9HC38 313 aa12.1□□□□□ -0.47
SMU1-201ENST00000397149 ZNF175Q9Y473 711 aa12.1□□□□□ -0.47
SMU1-201ENST00000397149 ADGBQ8N7X0 1667 aa12.1□□□□□ -0.47
SMU1-201ENST00000397149 DNMT1P26358 1616 aaKnown RBP12.1□□□□□ -0.47
SMU1-201ENST00000397149 CIB4A0PJX0 185 aa12.1□□□□□ -0.47
SMU1-201ENST00000397149 ANKRD63C9JTQ0 380 aa12.1□□□□□ -0.47
SMU1-201ENST00000397149 SCDO00767 359 aa12.1□□□□□ -0.47
SMU1-201ENST00000397149 TM7SF2O76062 418 aa12.1□□□□□ -0.47
SMU1-201ENST00000397149 ZBTB48P10074 688 aaPredicted RBP12.1□□□□□ -0.47
SMU1-201ENST00000397149 CDH15P55291 814 aa12.1□□□□□ -0.47
SMU1-201ENST00000397149 CHIT1Q13231 466 aa12.1□□□□□ -0.47
SMU1-201ENST00000397149 PIWIL4Q7Z3Z4 852 aaKnown RBP12.1□□□□□ -0.47
SMU1-201ENST00000397149 UPF1Q92900 1129 aaKnown RBP eCLIP12.1□□□□□ -0.47
SMU1-201ENST00000397149 RPL10LQ96L21 214 aaKnown RBP12.1□□□□□ -0.47
SMU1-201ENST00000397149 WACQ9BTA9 647 aa12.1□□□□□ -0.47
SMU1-201ENST00000397149 AGO3Q9H9G7 860 aaKnown RBP12.1□□□□□ -0.47
SMU1-201ENST00000397149 USP29Q9HBJ7 922 aa12.1□□□□□ -0.47
SMU1-201ENST00000397149 ZNF510Q9Y2H8 683 aa12.1□□□□□ -0.47
SMU1-201ENST00000397149 PTPRTO14522 1441 aa12.1□□□□□ -0.47
SMU1-201ENST00000397149 ARGFXA6NJG6 315 aa12.1□□□□□ -0.47
SMU1-201ENST00000397149 TRAFD1O14545 582 aaPredicted RBP12.1□□□□□ -0.47
SMU1-201ENST00000397149 CYP11A1P05108 521 aa12.1□□□□□ -0.47
SMU1-201ENST00000397149 PKMP14618 531 aaKnown RBP12.1□□□□□ -0.47
SMU1-201ENST00000397149 VEGFAP15692 232 aaPredicted RBP12.1□□□□□ -0.47
SMU1-201ENST00000397149 BRCC3P46736 316 aa12.1□□□□□ -0.47
SMU1-201ENST00000397149 OR5AK3PQ8NH89 298 aa12.1□□□□□ -0.47
SMU1-201ENST00000397149 SLCO1B3Q9NPD5 702 aa12.1□□□□□ -0.47
SMU1-201ENST00000397149 NUFIP1Q9UHK0 495 aaKnown RBP12.1□□□□□ -0.47
SMU1-201ENST00000397149 ABCC2Q92887 1545 aa12.1□□□□□ -0.47
SMU1-201ENST00000397149 HRGP04196 525 aa12.1□□□□□ -0.47
SMU1-201ENST00000397149 SERPINA6P08185 405 aa12.1□□□□□ -0.47
SMU1-201ENST00000397149 IGFBP1P08833 259 aaPredicted RBP12.1□□□□□ -0.47
SMU1-201ENST00000397149 SREBF1P36956 1147 aa12.1□□□□□ -0.47
SMU1-201ENST00000397149 CLRN1P58418 232 aa12.1□□□□□ -0.47
SMU1-201ENST00000397149 RBM20Q5T481 1227 aaKnown RBP12.1□□□□□ -0.47
SMU1-201ENST00000397149 NAPRTQ6XQN6 538 aa12.1□□□□□ -0.47
SMU1-201ENST00000397149 FUKQ8N0W3 1084 aa12.1□□□□□ -0.47
SMU1-201ENST00000397149 KLHL36Q8N4N3 616 aa12.1□□□□□ -0.47
SMU1-201ENST00000397149 METTL27Q8N6F8 245 aaPredicted RBP12.1□□□□□ -0.47
SMU1-201ENST00000397149 SLC37A3Q8NCC5 494 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms