RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 GCNT7Q6ZNI0 430 aa23.47■■□□□ 1.35
CSNK1E-203ENST00000396832 KRTCAP2Q8N6L1 136 aa23.47■■□□□ 1.35
CSNK1E-203ENST00000396832 AP5M1Q9H0R1 490 aa23.47■■□□□ 1.35
CSNK1E-203ENST00000396832 DDX28Q9NUL7 540 aaKnown RBP23.47■■□□□ 1.35
CSNK1E-203ENST00000396832 TMEM45AQ9NWC5 275 aa23.47■■□□□ 1.35
CSNK1E-203ENST00000396832 PRG3Q9Y2Y8 225 aaPredicted RBP23.47■■□□□ 1.35
CSNK1E-203ENST00000396832 MLYCDO95822 493 aa23.46■■□□□ 1.35
CSNK1E-203ENST00000396832 CYP4F3Q08477 520 aa23.46■■□□□ 1.35
CSNK1E-203ENST00000396832 TTC23LQ6PF05 361 aa23.46■■□□□ 1.35
CSNK1E-203ENST00000396832 ASCC1Q8N9N2 400 aaKnown RBP23.46■■□□□ 1.35
CSNK1E-203ENST00000396832 OR2A25A4D2G3 310 aa23.46■■□□□ 1.35
CSNK1E-203ENST00000396832 GOLGA8CPA6NN73 597 aa23.46■■□□□ 1.35
CSNK1E-203ENST00000396832 EIF3FO00303 357 aaPredicted RBP23.46■■□□□ 1.35
CSNK1E-203ENST00000396832 SCAMP3O14828 347 aaKnown RBP23.46■■□□□ 1.35
CSNK1E-203ENST00000396832 HAT1O14929 419 aa23.46■■□□□ 1.35
CSNK1E-203ENST00000396832 AIREO43918 545 aa23.46■■□□□ 1.35
CSNK1E-203ENST00000396832 TSPAN12O95859 305 aa23.46■■□□□ 1.35
CSNK1E-203ENST00000396832 HLA-DPA1P20036 260 aa23.46■■□□□ 1.35
CSNK1E-203ENST00000396832 RACK1P63244 317 aaKnown RBP23.46■■□□□ 1.35
CSNK1E-203ENST00000396832 C10orf111Q8N326 155 aa23.46■■□□□ 1.35
CSNK1E-203ENST00000396832 OR4F6Q8NGB9 312 aa23.46■■□□□ 1.35
CSNK1E-203ENST00000396832 OR6F1Q8NGZ6 308 aa23.46■■□□□ 1.35
CSNK1E-203ENST00000396832 SLC39A13Q96H72 371 aa23.46■■□□□ 1.35
CSNK1E-203ENST00000396832 BARD1Q99728 777 aaKnown RBP23.46■■□□□ 1.35
CSNK1E-203ENST00000396832 REXO4Q9GZR2 422 aaKnown RBP23.46■■□□□ 1.35
CSNK1E-203ENST00000396832 GMPPBQ9Y5P6 360 aa23.46■■□□□ 1.35
CSNK1E-203ENST00000396832 TDRD15B5MCY1 1934 aaKnown RBP23.46■■□□□ 1.35
CSNK1E-203ENST00000396832 MSH3P20585 1137 aa23.46■■□□□ 1.35
CSNK1E-203ENST00000396832 ACVR1Q04771 509 aa23.46■■□□□ 1.35
CSNK1E-203ENST00000396832 ATAD3CQ5T2N8 411 aa23.46■■□□□ 1.35
CSNK1E-203ENST00000396832 GDF6Q6KF10 455 aaPredicted RBP23.46■■□□□ 1.35
CSNK1E-203ENST00000396832 MTFMTQ96DP5 389 aaKnown RBP23.46■■□□□ 1.35
CSNK1E-203ENST00000396832 MS4A4AQ96JQ5 239 aa23.46■■□□□ 1.35
CSNK1E-203ENST00000396832 POPDC3Q9HBV1 291 aa23.46■■□□□ 1.35
CSNK1E-203ENST00000396832 HEBP1Q9NRV9 189 aa23.46■■□□□ 1.35
CSNK1E-203ENST00000396832 SLC6A13Q9NSD5 602 aa23.46■■□□□ 1.35
CSNK1E-203ENST00000396832 VNN3Q9NY84 501 aa23.46■■□□□ 1.35
CSNK1E-203ENST00000396832 PDZK1P1A8MUH7 402 aa23.45■■□□□ 1.34
CSNK1E-203ENST00000396832 MC4RP32245 332 aa23.45■■□□□ 1.34
CSNK1E-203ENST00000396832 RPL9P32969 192 aaKnown RBP23.45■■□□□ 1.34
CSNK1E-203ENST00000396832 ZNF45Q02386 682 aa23.45■■□□□ 1.34
CSNK1E-203ENST00000396832 CTSL3PQ5NE16 218 aa23.45■■□□□ 1.34
CSNK1E-203ENST00000396832 CAPN13Q6MZZ7 669 aaPredicted RBP23.45■■□□□ 1.34
CSNK1E-203ENST00000396832 GALNT10Q86SR1 603 aa23.45■■□□□ 1.34
CSNK1E-203ENST00000396832 NLGN4XQ8N0W4 816 aa23.45■■□□□ 1.34
CSNK1E-203ENST00000396832 TEX26Q8N6G2 289 aa23.45■■□□□ 1.34
CSNK1E-203ENST00000396832 SLC38A4Q969I6 547 aa23.45■■□□□ 1.34
CSNK1E-203ENST00000396832 DCAF13Q9NV06 445 aaKnown RBP23.45■■□□□ 1.34
CSNK1E-203ENST00000396832 QPCTLQ9NXS2 382 aa23.45■■□□□ 1.34
CSNK1E-203ENST00000396832 MN1Q10571 1320 aaPredicted RBP23.45■■□□□ 1.34
CSNK1E-203ENST00000396832 GREB1Q4ZG55 1949 aa23.45■■□□□ 1.34
CSNK1E-203ENST00000396832 SCELO95171 688 aa23.45■■□□□ 1.34
CSNK1E-203ENST00000396832 ZNF865P0CJ78 1059 aaPredicted RBP23.45■■□□□ 1.34
CSNK1E-203ENST00000396832 OGNP20774 298 aaKnown RBP23.45■■□□□ 1.34
CSNK1E-203ENST00000396832 UGT2B10P36537 528 aa23.45■■□□□ 1.34
CSNK1E-203ENST00000396832 LIPAP38571 399 aa23.45■■□□□ 1.34
CSNK1E-203ENST00000396832 CPT1AP50416 773 aa23.45■■□□□ 1.34
CSNK1E-203ENST00000396832 TYSND1Q2T9J0 566 aa23.45■■□□□ 1.34
CSNK1E-203ENST00000396832 ANKRD46Q86W74 232 aa23.45■■□□□ 1.34
CSNK1E-203ENST00000396832 GATAD2AQ86YP4 633 aa23.45■■□□□ 1.34
CSNK1E-203ENST00000396832 APOL5Q9BWW9 433 aa23.45■■□□□ 1.34
CSNK1E-203ENST00000396832 NOD1Q9Y239 953 aa23.45■■□□□ 1.34
CSNK1E-203ENST00000396832 TRPV2Q9Y5S1 764 aa23.45■■□□□ 1.34
CSNK1E-203ENST00000396832 GBF1Q92538 1859 aa23.44■■□□□ 1.34
CSNK1E-203ENST00000396832 HOXB8P17481 243 aaPredicted RBP23.44■■□□□ 1.34
CSNK1E-203ENST00000396832 HTR7P34969 479 aa23.44■■□□□ 1.34
CSNK1E-203ENST00000396832 KCNQ1P51787 676 aa23.44■■□□□ 1.34
CSNK1E-203ENST00000396832 KRR1Q13601 381 aaKnown RBP23.44■■□□□ 1.34
CSNK1E-203ENST00000396832 CHPFQ8IZ52 775 aa23.44■■□□□ 1.34
CSNK1E-203ENST00000396832 GPR150Q8NGU9 434 aa23.44■■□□□ 1.34
CSNK1E-203ENST00000396832 CD200R1Q8TD46 325 aa23.44■■□□□ 1.34
CSNK1E-203ENST00000396832 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP23.44■■□□□ 1.34
CSNK1E-203ENST00000396832 WASH4PA8MWX3 477 aa23.44■■□□□ 1.34
CSNK1E-203ENST00000396832 TLR5O60602 858 aa23.44■■□□□ 1.34
CSNK1E-203ENST00000396832 VPS26AO75436 327 aa23.44■■□□□ 1.34
CSNK1E-203ENST00000396832 DIRAS1O95057 198 aa23.44■■□□□ 1.34
CSNK1E-203ENST00000396832 SERPINA1P01009 418 aa23.44■■□□□ 1.34
CSNK1E-203ENST00000396832 S100A5P33763 92 aa23.44■■□□□ 1.34
CSNK1E-203ENST00000396832 HSPA7P48741 367 aa23.44■■□□□ 1.34
CSNK1E-203ENST00000396832 ZNF140P52738 457 aaPredicted RBP23.44■■□□□ 1.34
CSNK1E-203ENST00000396832 MRPS15P82914 257 aaKnown RBP23.44■■□□□ 1.34
CSNK1E-203ENST00000396832 PURAQ00577 322 aaKnown RBP23.44■■□□□ 1.34
CSNK1E-203ENST00000396832 IL10RBQ08334 325 aa23.44■■□□□ 1.34
CSNK1E-203ENST00000396832 SPANXN4Q5MJ08 99 aa23.44■■□□□ 1.34
CSNK1E-203ENST00000396832 C1orf74Q96LT6 269 aa23.44■■□□□ 1.34
CSNK1E-203ENST00000396832 SNX18Q96RF0 628 aa23.44■■□□□ 1.34
CSNK1E-203ENST00000396832 ITPAQ9BY32 194 aa23.44■■□□□ 1.34
CSNK1E-203ENST00000396832 CCNB1IP1Q9NPC3 277 aa23.44■■□□□ 1.34
CSNK1E-203ENST00000396832 CCDC177Q9NQR7 707 aaPredicted RBP23.44■■□□□ 1.34
CSNK1E-203ENST00000396832 RASSF1Q9NS23 344 aa23.44■■□□□ 1.34
CSNK1E-203ENST00000396832 MARCH2Q9P0N8 246 aa23.44■■□□□ 1.34
CSNK1E-203ENST00000396832 PADI3Q9ULW8 664 aa23.44■■□□□ 1.34
CSNK1E-203ENST00000396832 ANKRD36A6QL64 1941 aa23.44■■□□□ 1.34
CSNK1E-203ENST00000396832 SSX4O60224 188 aa23.43■■□□□ 1.34
CSNK1E-203ENST00000396832 CREG1O75629 220 aa23.43■■□□□ 1.34
CSNK1E-203ENST00000396832 PBX3P40426 434 aa23.43■■□□□ 1.34
CSNK1E-203ENST00000396832 OR2B6P58173 313 aa23.43■■□□□ 1.34
CSNK1E-203ENST00000396832 IL2P60568 153 aa23.43■■□□□ 1.34
CSNK1E-203ENST00000396832 CCDC58Q4VC31 144 aa23.43■■□□□ 1.34
CSNK1E-203ENST00000396832 AHSA2Q719I0 299 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms