RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 SIDT2Q8NBJ9 832 aaKnown RBP10.04□□□□□ -0.8
NEDD8-202ENST00000396828 OR2W6PQ8NHA6 318 aa10.04□□□□□ -0.8
NEDD8-202ENST00000396828 DTX3LQ8TDB6 740 aa10.04□□□□□ -0.8
NEDD8-202ENST00000396828 ZNF514Q96K75 400 aaPredicted RBP10.04□□□□□ -0.8
NEDD8-202ENST00000396828 PSMG3-AS1Q96PY0 264 aa10.04□□□□□ -0.8
NEDD8-202ENST00000396828 C19orf43Q9BQ61 176 aa10.04□□□□□ -0.8
NEDD8-202ENST00000396828 TRIM56Q9BRZ2 755 aaKnown RBP10.04□□□□□ -0.8
NEDD8-202ENST00000396828 FAM167BQ9BTA0 163 aa10.04□□□□□ -0.8
NEDD8-202ENST00000396828 FGF21Q9NSA1 209 aa10.04□□□□□ -0.8
NEDD8-202ENST00000396828 TREX1Q9NSU2 369 aa10.04□□□□□ -0.8
NEDD8-202ENST00000396828 C20orf96Q9NUD7 363 aaPredicted RBP10.04□□□□□ -0.8
NEDD8-202ENST00000396828 NLE1Q9NVX2 485 aaPredicted RBP10.04□□□□□ -0.8
NEDD8-202ENST00000396828 HRASLS2Q9NWW9 162 aa10.04□□□□□ -0.8
NEDD8-202ENST00000396828 NSMCE4AQ9NXX6 385 aa10.04□□□□□ -0.8
NEDD8-202ENST00000396828 MOCS1Q9NZB8 636 aa10.04□□□□□ -0.8
NEDD8-202ENST00000396828 ZFATQ9P243 1243 aa10.04□□□□□ -0.8
NEDD8-202ENST00000396828 TXNDC16Q9P2K2 825 aa10.04□□□□□ -0.8
NEDD8-202ENST00000396828 RARRES3Q9UL19 164 aa10.04□□□□□ -0.8
NEDD8-202ENST00000396828 UNC79Q9P2D8 2635 aa10.04□□□□□ -0.8
NEDD8-202ENST00000396828 TLDC2A0PJX2 215 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 OR6C74A6NCV1 312 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 POC1B-GALNT4F8VUJ3 575 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 MKRN2OSH3BPM6 223 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 RASGRF2O14827 1237 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 RFPL1O75677 317 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 SASH3O75995 380 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 VAPBO95292 243 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 MYZAPP0CAP1 466 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 ERVK-10P10266 1014 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 PYGBP11216 843 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 MTHFD1P11586 935 aaKnown RBP10.03□□□□□ -0.8
NEDD8-202ENST00000396828 VCLP18206 1134 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 MSH2P43246 934 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 CD97P48960 835 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 KPNA2P52292 529 aaKnown RBP10.03□□□□□ -0.8
NEDD8-202ENST00000396828 ZNF140P52738 457 aaPredicted RBP10.03□□□□□ -0.8
NEDD8-202ENST00000396828 ACVR1Q04771 509 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 ZNF844Q08AG5 666 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 PLCL1Q15111 1095 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 KRT71Q3SY84 523 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 KBTBD12Q3ZCT8 623 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 NADK2Q4G0N4 442 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 HSP90B2PQ58FF3 399 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 UBAP2Q5T6F2 1119 aaKnown RBP10.03□□□□□ -0.8
NEDD8-202ENST00000396828 ZDHHC20Q5W0Z9 365 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 LRRC6Q86X45 466 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 APLFQ8IW19 511 aaPredicted RBP10.03□□□□□ -0.8
NEDD8-202ENST00000396828 RP1L1Q8IWN7 2480 aaPredicted RBP10.03□□□□□ -0.8
NEDD8-202ENST00000396828 LMNTD2Q8IXW0 634 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 D2HGDHQ8N465 521 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 PPM1NQ8N819 430 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 OR4K2Q8NGD2 314 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 OR6P1Q8NGX9 317 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 ZNF398Q8TD17 642 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 CALML6Q8TD86 181 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 ZNF501Q96CX3 271 aaPredicted RBP10.03□□□□□ -0.8
NEDD8-202ENST00000396828 RMDN2Q96LZ7 410 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 C12orf66Q96MD2 445 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 ZNF778Q96MU6 729 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 TMEM109Q9BVC6 243 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 STMN4Q9H169 189 aaPredicted RBP10.03□□□□□ -0.8
NEDD8-202ENST00000396828 FAM96AQ9H5X1 160 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 PDE7BQ9NP56 450 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 SLC2A6Q9UGQ3 507 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 SLC24A2Q9UI40 661 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 FKBPLQ9UIM3 349 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 KCND3Q9UK17 655 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 NFS1Q9Y697 457 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 ITPR2Q14571 2701 aa10.03□□□□□ -0.8
NEDD8-202ENST00000396828 ICE1Q9Y2F5 2266 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 BLACEA4D250 179 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 MGAT4DA6NG13 374 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 TLCD2A6NGC4 264 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 ARGFXA6NJG6 315 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 FAM159BA6NKW6 160 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 SMIM23A6NLE4 172 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 CCL22O00626 93 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 KCNJ13O60928 360 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 CDH16O75309 829 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 SCRG1O75711 98 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 PRAMEF1O95521 474 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 INHBAP08476 426 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 PRSS56P0CW18 603 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 RNF224P0DH78 156 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 POLR2CP19387 275 aaPredicted RBP10.02□□□□□ -0.81
NEDD8-202ENST00000396828 PTPN4P29074 926 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 ATP5DP30049 168 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 AKT1P31749 480 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 CDKN1CP49918 316 aaPredicted RBP10.02□□□□□ -0.81
NEDD8-202ENST00000396828 HSD11B2P80365 405 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 TMPRSS15P98073 1019 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 XIAPP98170 497 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 ABRQ12979 859 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 UGT8Q16880 541 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 HSP90AA5PQ58FG0 334 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 LGSNQ5TDP6 509 aa10.02□□□□□ -0.81
NEDD8-202ENST00000396828 CAPRIN2Q6IMN6 1127 aaKnown RBP10.02□□□□□ -0.81
NEDD8-202ENST00000396828 TRMT10BQ6PF06 316 aaKnown RBP10.02□□□□□ -0.81
NEDD8-202ENST00000396828 ZNF517Q6ZMY9 492 aaPredicted RBP10.02□□□□□ -0.81
NEDD8-202ENST00000396828 TAOK1Q7L7X3 1001 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms