RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 MKKSQ9NPJ1 570 aaPredicted RBP13.71□□□□□ -0.21
COL4A3-202ENST00000396578 PLEKHA6Q9Y2H5 1048 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 A0A1W2PRQ8 180 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 LRRC72A6NJI9 287 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 OR2AG2A6NM03 316 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 PET100P0DJ07 73 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 EDNRAP25101 427 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 CD40LGP29965 261 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 CRISP3P54108 245 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 SCARB2Q14108 478 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 KCTD19Q17RG1 926 aaPredicted RBP13.71□□□□□ -0.21
COL4A3-202ENST00000396578 FBXO48Q5FWF7 155 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 GEMIN6Q8WXD5 167 aaKnown RBP13.71□□□□□ -0.21
COL4A3-202ENST00000396578 NCSTNQ92542 709 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 HBEGFQ99075 208 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 HIPK3Q9H422 1215 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 NR2E1Q9Y466 385 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 GRIN2DO15399 1336 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 ARL5CA6NH57 179 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 RYKP34925 604 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 DUSP4Q13115 394 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 CLEC12AQ5QGZ9 265 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 LCLAT1Q6UWP7 414 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 VSTM1Q6UX27 236 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 TMEM199Q8N511 208 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 OR10G2Q8NGC3 310 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 NKD2Q969F2 451 aaPredicted RBP13.71□□□□□ -0.21
COL4A3-202ENST00000396578 ASB9Q96DX5 294 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 CCDC120Q96HB5 630 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 SLC30A2Q9BRI3 323 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 GTPBP2Q9BX10 602 aaKnown RBP13.71□□□□□ -0.21
COL4A3-202ENST00000396578 DIP2BQ9P265 1576 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 SMSP52788 366 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 KIAA1161Q6NSJ0 714 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 CHERPQ8IWX8 916 aaKnown RBP13.71□□□□□ -0.21
COL4A3-202ENST00000396578 GALNT12Q8IXK2 581 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 AKT1S1Q96B36 256 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 TRIM36Q9NQ86 728 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 ABI3Q9P2A4 366 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 TBC1D14Q9P2M4 693 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 KCNN3Q9UGI6 736 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 FETUBQ9UGM5 382 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 CMAHPQ9Y471 501 aa13.71□□□□□ -0.21
COL4A3-202ENST00000396578 TRIM64CA6NLI5 447 aa13.71□□□□□ -0.22
COL4A3-202ENST00000396578 SEPT4O43236 478 aa13.71□□□□□ -0.22
COL4A3-202ENST00000396578 PPM1BO75688 479 aa13.71□□□□□ -0.22
COL4A3-202ENST00000396578 GABRR2P28476 465 aa13.71□□□□□ -0.22
COL4A3-202ENST00000396578 RPL26P61254 145 aaKnown RBP13.71□□□□□ -0.22
COL4A3-202ENST00000396578 RPS14P62263 151 aaKnown RBP13.71□□□□□ -0.22
COL4A3-202ENST00000396578 SLC16A10Q8TF71 515 aa13.71□□□□□ -0.22
COL4A3-202ENST00000396578 PTPRJQ12913 1337 aa13.71□□□□□ -0.22
COL4A3-202ENST00000396578 VWDEQ8N2E2 1590 aa13.71□□□□□ -0.22
COL4A3-202ENST00000396578 LOC100509620A0A075B734 347 aa13.71□□□□□ -0.22
COL4A3-202ENST00000396578 LOC100130705A0A1B0GUX0 176 aa13.71□□□□□ -0.22
COL4A3-202ENST00000396578 INSIG1O15503 277 aa13.71□□□□□ -0.22
COL4A3-202ENST00000396578 APODP05090 189 aa13.71□□□□□ -0.22
COL4A3-202ENST00000396578 E2F1Q01094 437 aa13.71□□□□□ -0.22
COL4A3-202ENST00000396578 RPA4Q13156 261 aa13.71□□□□□ -0.22
COL4A3-202ENST00000396578 PITRM1Q5JRX3 1037 aa13.71□□□□□ -0.22
COL4A3-202ENST00000396578 TRPM4Q8TD43 1214 aa13.71□□□□□ -0.22
COL4A3-202ENST00000396578 SLC7A6OSQ96CW6 309 aaPredicted RBP13.71□□□□□ -0.22
COL4A3-202ENST00000396578 FEM1CQ96JP0 617 aa13.71□□□□□ -0.22
COL4A3-202ENST00000396578 RIPOR3Q96MK2 946 aa13.71□□□□□ -0.22
COL4A3-202ENST00000396578 VNN2O95498 520 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 NCBP2P52298 156 aaKnown RBP eCLIP13.7□□□□□ -0.22
COL4A3-202ENST00000396578 DAG1Q14118 895 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 ZNF460Q14592 562 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 NIPAL1Q6NVV3 410 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 PIGWQ7Z7B1 504 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 GPR151Q8TDV0 419 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 RNF121Q9H920 327 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 PTPRMP28827 1452 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 COL1A2P08123 1366 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 TULP2O00295 520 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 WNT10BO00744 389 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 HMGN1P05114 100 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 VARSP26640 1264 aaKnown RBP13.7□□□□□ -0.22
COL4A3-202ENST00000396578 SLC6A9P48067 706 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 OR12D2P58182 307 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 C1QTNF8P60827 252 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 HERVK_113P63132 956 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 SLC8B1Q6J4K2 584 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 SERPINA9Q86WD7 417 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 SIDT2Q8NBJ9 832 aaKnown RBP13.7□□□□□ -0.22
COL4A3-202ENST00000396578 ERVK-6Q9BXR3 956 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 DDX4Q9NQI0 724 aaKnown RBP13.7□□□□□ -0.22
COL4A3-202ENST00000396578 TNFRSF10DQ9UBN6 386 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 SEC14L4Q9UDX3 406 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 OAZ3Q9UMX2 235 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 C13orf42A0A1B0GVH6 325 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 RHOQP17081 205 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 SLC1A2P43004 574 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 RIPPLY1Q0D2K3 151 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 NADK2Q4G0N4 442 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 ZNF101Q8IZC7 436 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 FIBCD1Q8N539 461 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 DCAKDQ8WVC6 231 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 NDC1Q9BTX1 674 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 DUSP26Q9BV47 211 aa13.7□□□□□ -0.22
COL4A3-202ENST00000396578 CFAP97Q9P2B7 532 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms