RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 TBC1D21Q8IYX1 336 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 CDYL2Q8N8U2 506 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 CEP70Q8NHQ1 597 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 USP7Q93009 1102 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 TSACCQ96A04 125 aaPredicted RBP12.34□□□□□ -0.43
TRIM39-204ENST00000396548 CCT7Q99832 543 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 CARS2Q9HA77 564 aaKnown RBP12.34□□□□□ -0.43
TRIM39-204ENST00000396548 POLG2Q9UHN1 485 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 LNPEPQ9UIQ6 1025 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 A0A1W2PR77 199 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 E7ENX8 843 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 KATNA1O75449 491 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 EML2O95834 649 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 PDGFBP01127 241 aaPredicted RBP12.34□□□□□ -0.43
TRIM39-204ENST00000396548 CD22P20273 847 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 CASP2P42575 452 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 HTR6P50406 440 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 TAP2Q03519 686 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 FASTKQ14296 549 aaKnown RBP12.34□□□□□ -0.43
TRIM39-204ENST00000396548 TBCCQ15814 346 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 Q6ZSR9 355 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 PPFIBP2Q8ND30 876 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 FAM174AQ8TBP5 190 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 WDR34Q96EX3 536 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 NRTNQ99748 197 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 CAAP1Q9H8G2 361 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 KLF15Q9UIH9 416 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 TP53BP1Q12888 1972 aaPredicted RBP12.34□□□□□ -0.43
TRIM39-204ENST00000396548 SPTY2D1-AS1A0A0U1RR47 76 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 CBX6O95503 412 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 ALDOCP09972 364 aaKnown RBP12.34□□□□□ -0.43
TRIM39-204ENST00000396548 LINC00032P0C843 101 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 ITPKAP23677 461 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 HTR1BP28222 390 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 MAGEA9P43362 315 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 CXCL12P48061 93 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 MRPL19P49406 292 aaKnown RBP12.34□□□□□ -0.43
TRIM39-204ENST00000396548 LRP8Q14114 963 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 PTK2BQ14289 1009 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 FZD2Q14332 565 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 UAP1L1Q3KQV9 507 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 ABRAXAS1Q6UWZ7 409 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 TRIM46Q7Z4K8 759 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 SLC29A3Q9BZD2 475 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 KLQ9UEF7 1012 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 ASF1AQ9Y294 204 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 BTRCQ9Y297 605 aa12.34□□□□□ -0.43
TRIM39-204ENST00000396548 SLC22A2O15244 555 aa12.33□□□□□ -0.44
TRIM39-204ENST00000396548 UGDHO60701 494 aa12.33□□□□□ -0.44
TRIM39-204ENST00000396548 KIAA0754O94854 1291 aa12.33□□□□□ -0.44
TRIM39-204ENST00000396548 CLDN9O95484 217 aa12.33□□□□□ -0.44
TRIM39-204ENST00000396548 WNT1P04628 370 aa12.33□□□□□ -0.44
TRIM39-204ENST00000396548 NPPBP16860 134 aa12.33□□□□□ -0.44
TRIM39-204ENST00000396548 CD27P26842 260 aa12.33□□□□□ -0.44
TRIM39-204ENST00000396548 PNLIPRP1P54315 467 aa12.33□□□□□ -0.44
TRIM39-204ENST00000396548 NAE1Q13564 534 aa12.33□□□□□ -0.44
TRIM39-204ENST00000396548 ARHGAP19Q14CB8 494 aa12.33□□□□□ -0.44
TRIM39-204ENST00000396548 NAA25Q14CX7 972 aa12.33□□□□□ -0.44
TRIM39-204ENST00000396548 ABRAXAS2Q15018 415 aa12.33□□□□□ -0.44
TRIM39-204ENST00000396548 EFL1Q7Z2Z2 1120 aaKnown RBP12.33□□□□□ -0.44
TRIM39-204ENST00000396548 RGL4Q8IZJ4 473 aa12.33□□□□□ -0.44
TRIM39-204ENST00000396548 CCL4L1Q8NHW4 92 aa12.33□□□□□ -0.44
TRIM39-204ENST00000396548 MAGEC3Q8TD91 643 aa12.33□□□□□ -0.44
TRIM39-204ENST00000396548 PRDM8Q9NQV8 689 aa12.33□□□□□ -0.44
TRIM39-204ENST00000396548 GPRC5BQ9NZH0 403 aa12.33□□□□□ -0.44
TRIM39-204ENST00000396548 TBC1D29Q9UFV1 150 aa12.33□□□□□ -0.44
TRIM39-204ENST00000396548 TRIM33Q9UPN9 1127 aa12.33□□□□□ -0.44
TRIM39-204ENST00000396548 SH2B3Q9UQQ2 575 aa12.33□□□□□ -0.44
TRIM39-204ENST00000396548 COPG1Q9Y678 874 aaKnown RBP12.33□□□□□ -0.44
TRIM39-204ENST00000396548 ANKRD65E5RJM6 399 aa12.33□□□□□ -0.44
TRIM39-204ENST00000396548 SLC35G4P0C7Q5 338 aa12.33□□□□□ -0.44
TRIM39-204ENST00000396548 TBPL1P62380 186 aa12.33□□□□□ -0.44
TRIM39-204ENST00000396548 ACTN3Q08043 901 aaPredicted RBP12.33□□□□□ -0.44
TRIM39-204ENST00000396548 SIGLEC14Q08ET2 396 aa12.33□□□□□ -0.44
TRIM39-204ENST00000396548 OGFOD2Q6N063 350 aa12.33□□□□□ -0.44
TRIM39-204ENST00000396548 DUS1LQ6P1R4 473 aaKnown RBP12.33□□□□□ -0.44
TRIM39-204ENST00000396548 METTL6Q8TCB7 284 aa12.33□□□□□ -0.44
TRIM39-204ENST00000396548 GPBAR1Q8TDU6 330 aa12.33□□□□□ -0.44
TRIM39-204ENST00000396548 RAD51AP1Q96B01 352 aa12.33□□□□□ -0.44
TRIM39-204ENST00000396548 NSL1Q96IY1 281 aa12.33□□□□□ -0.44
TRIM39-204ENST00000396548 SLC6A18Q96N87 628 aa12.33□□□□□ -0.44
TRIM39-204ENST00000396548 TMEM168Q9H0V1 697 aa12.33□□□□□ -0.44
TRIM39-204ENST00000396548 PRMT8Q9NR22 394 aaPredicted RBP12.33□□□□□ -0.44
TRIM39-204ENST00000396548 TRNAU1APQ9NX07 287 aaKnown RBP12.33□□□□□ -0.44
TRIM39-204ENST00000396548 CFAP20Q9Y6A4 193 aaKnown RBP12.33□□□□□ -0.44
TRIM39-204ENST00000396548 ATP6AP2A0A1C7CYW4 349 aa12.32□□□□□ -0.44
TRIM39-204ENST00000396548 A0A1W2PPV9 198 aa12.32□□□□□ -0.44
TRIM39-204ENST00000396548 ATP6AP2O75787 350 aa12.32□□□□□ -0.44
TRIM39-204ENST00000396548 RPE65Q16518 533 aa12.32□□□□□ -0.44
TRIM39-204ENST00000396548 LIPJQ5W064 366 aa12.32□□□□□ -0.44
TRIM39-204ENST00000396548 LMNTD1Q8N9Z9 388 aa12.32□□□□□ -0.44
TRIM39-204ENST00000396548 EDAQ92838 391 aa12.32□□□□□ -0.44
TRIM39-204ENST00000396548 ACTR5Q9H9F9 607 aaPredicted RBP12.32□□□□□ -0.44
TRIM39-204ENST00000396548 FARSBQ9NSD9 589 aaKnown RBP12.32□□□□□ -0.44
TRIM39-204ENST00000396548 GIMAP2Q9UG22 337 aa12.32□□□□□ -0.44
TRIM39-204ENST00000396548 ANGPTL3Q9Y5C1 460 aa12.32□□□□□ -0.44
TRIM39-204ENST00000396548 E7EQ34 232 aa12.32□□□□□ -0.44
TRIM39-204ENST00000396548 MANBAO00462 879 aa12.32□□□□□ -0.44
TRIM39-204ENST00000396548 DCXO43602 365 aa12.32□□□□□ -0.44
TRIM39-204ENST00000396548 VPS4BO75351 444 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms