RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 RASGRF2O14827 1237 aa13.25□□□□□ -0.29
CXCL12-205ENST00000395794 CD63P08962 238 aa13.25□□□□□ -0.29
CXCL12-205ENST00000395794 ARNTP27540 789 aa13.25□□□□□ -0.29
CXCL12-205ENST00000395794 RORAP35398 523 aa13.25□□□□□ -0.29
CXCL12-205ENST00000395794 ADARP55265 1226 aaKnown RBP13.25□□□□□ -0.29
CXCL12-205ENST00000395794 KCTD19Q17RG1 926 aaPredicted RBP13.25□□□□□ -0.29
CXCL12-205ENST00000395794 TYSND1Q2T9J0 566 aa13.25□□□□□ -0.29
CXCL12-205ENST00000395794 DEFB110Q30KQ9 67 aa13.25□□□□□ -0.29
CXCL12-205ENST00000395794 PTCHD3Q3KNS1 767 aa13.25□□□□□ -0.29
CXCL12-205ENST00000395794 ANKRD20A4Q4UJ75 823 aa13.25□□□□□ -0.29
CXCL12-205ENST00000395794 ZNF789Q5FWF6 425 aa13.25□□□□□ -0.29
CXCL12-205ENST00000395794 ANKRD22Q5VYY1 191 aa13.25□□□□□ -0.29
CXCL12-205ENST00000395794 TLDC1Q6P9B6 456 aa13.25□□□□□ -0.29
CXCL12-205ENST00000395794 CNSTQ6PJW8 725 aa13.25□□□□□ -0.29
CXCL12-205ENST00000395794 TMEM135Q86UB9 458 aa13.25□□□□□ -0.29
CXCL12-205ENST00000395794 APLFQ8IW19 511 aaPredicted RBP13.25□□□□□ -0.29
CXCL12-205ENST00000395794 C2orf73Q8N5S3 287 aaPredicted RBP13.25□□□□□ -0.29
CXCL12-205ENST00000395794 DENND1AQ8TEH3 1009 aa13.25□□□□□ -0.29
CXCL12-205ENST00000395794 COG1Q8WTW3 980 aa13.25□□□□□ -0.29
CXCL12-205ENST00000395794 LPGAT1Q92604 370 aa13.25□□□□□ -0.29
CXCL12-205ENST00000395794 RUFY1Q96T51 708 aa13.25□□□□□ -0.29
CXCL12-205ENST00000395794 NDC1Q9BTX1 674 aa13.25□□□□□ -0.29
CXCL12-205ENST00000395794 INTS10Q9NVR2 710 aaKnown RBP13.25□□□□□ -0.29
CXCL12-205ENST00000395794 CIDEBQ9UHD4 219 aa13.25□□□□□ -0.29
CXCL12-205ENST00000395794 ANAPC2Q9UJX6 822 aa13.25□□□□□ -0.29
CXCL12-205ENST00000395794 SNX12Q9UMY4 172 aa13.25□□□□□ -0.29
CXCL12-205ENST00000395794 G3BP2Q9UN86 482 aaKnown RBP13.25□□□□□ -0.29
CXCL12-205ENST00000395794 SRPK3Q9UPE1 567 aa13.25□□□□□ -0.29
CXCL12-205ENST00000395794 ZSCAN9O15535 394 aaPredicted RBP13.24□□□□□ -0.29
CXCL12-205ENST00000395794 TMEM63AO94886 807 aa13.24□□□□□ -0.29
CXCL12-205ENST00000395794 FKBP9O95302 570 aa13.24□□□□□ -0.29
CXCL12-205ENST00000395794 WISP1O95388 367 aa13.24□□□□□ -0.29
CXCL12-205ENST00000395794 C1orf105O95561 183 aa13.24□□□□□ -0.29
CXCL12-205ENST00000395794 PKMP14618 531 aaKnown RBP13.24□□□□□ -0.29
CXCL12-205ENST00000395794 ATP5DP30049 168 aa13.24□□□□□ -0.29
CXCL12-205ENST00000395794 NCF4Q15080 339 aa13.24□□□□□ -0.29
CXCL12-205ENST00000395794 ZIC1Q15915 447 aa13.24□□□□□ -0.29
CXCL12-205ENST00000395794 TTLL9Q3SXZ7 439 aa13.24□□□□□ -0.29
CXCL12-205ENST00000395794 ZC3H12BQ5HYM0 836 aaKnown RBP13.24□□□□□ -0.29
CXCL12-205ENST00000395794 CTSL3PQ5NE16 218 aa13.24□□□□□ -0.29
CXCL12-205ENST00000395794 ZNF470Q6ECI4 717 aa13.24□□□□□ -0.29
CXCL12-205ENST00000395794 TAX1BP1Q86VP1 789 aa13.24□□□□□ -0.29
CXCL12-205ENST00000395794 CILP2Q8IUL8 1156 aa13.24□□□□□ -0.29
CXCL12-205ENST00000395794 LMNTD2Q8IXW0 634 aa13.24□□□□□ -0.29
CXCL12-205ENST00000395794 PPIL6Q8IXY8 311 aa13.24□□□□□ -0.29
CXCL12-205ENST00000395794 ZBTB2Q8N680 514 aa13.24□□□□□ -0.29
CXCL12-205ENST00000395794 ZNF655Q8N720 491 aaPredicted RBP13.24□□□□□ -0.29
CXCL12-205ENST00000395794 LINC01555Q8NAE3 123 aa13.24□□□□□ -0.29
CXCL12-205ENST00000395794 FLVCR1-AS1Q8TAF5 88 aa13.24□□□□□ -0.29
CXCL12-205ENST00000395794 GABPB2Q8TAK5 448 aaPredicted RBP13.24□□□□□ -0.29
CXCL12-205ENST00000395794 PROKR1Q8TCW9 393 aa13.24□□□□□ -0.29
CXCL12-205ENST00000395794 CALML6Q8TD86 181 aa13.24□□□□□ -0.29
CXCL12-205ENST00000395794 FAM136AQ96C01 138 aa13.24□□□□□ -0.29
CXCL12-205ENST00000395794 BIRC8Q96P09 236 aa13.24□□□□□ -0.29
CXCL12-205ENST00000395794 SERPINB12Q96P63 405 aa13.24□□□□□ -0.29
CXCL12-205ENST00000395794 IL17FQ96PD4 163 aa13.24□□□□□ -0.29
CXCL12-205ENST00000395794 DHRS4Q9BTZ2 278 aa13.24□□□□□ -0.29
CXCL12-205ENST00000395794 SPRTNQ9H040 489 aaPredicted RBP13.24□□□□□ -0.29
CXCL12-205ENST00000395794 ACSS2Q9NR19 701 aa13.24□□□□□ -0.29
CXCL12-205ENST00000395794 FAM114A2Q9NRY5 505 aa13.24□□□□□ -0.29
CXCL12-205ENST00000395794 TSR3Q9UJK0 312 aaKnown RBP13.24□□□□□ -0.29
CXCL12-205ENST00000395794 TLK1Q9UKI8 766 aa13.24□□□□□ -0.29
CXCL12-205ENST00000395794 TCFL5Q9UL49 500 aa13.24□□□□□ -0.29
CXCL12-205ENST00000395794 ARGFXA6NJG6 315 aa13.23□□□□□ -0.29
CXCL12-205ENST00000395794 NIPSNAP2O75323 286 aa13.23□□□□□ -0.29
CXCL12-205ENST00000395794 TCP1P17987 556 aaKnown RBP13.23□□□□□ -0.29
CXCL12-205ENST00000395794 MAGP20916 626 aa13.23□□□□□ -0.29
CXCL12-205ENST00000395794 PEBP1P30086 187 aaKnown RBP13.23□□□□□ -0.29
CXCL12-205ENST00000395794 CSRP3P50461 194 aa13.23□□□□□ -0.29
CXCL12-205ENST00000395794 DCDP81605 110 aaKnown RBP13.23□□□□□ -0.29
CXCL12-205ENST00000395794 IL10RAQ13651 578 aa13.23□□□□□ -0.29
CXCL12-205ENST00000395794 GRB7Q14451 532 aa13.23□□□□□ -0.29
CXCL12-205ENST00000395794 LONRF1Q17RB8 773 aa13.23□□□□□ -0.29
CXCL12-205ENST00000395794 C1orf189Q5VU69 101 aa13.23□□□□□ -0.29
CXCL12-205ENST00000395794 MLIPQ5VWP3 458 aa13.23□□□□□ -0.29
CXCL12-205ENST00000395794 LCN10Q6JVE6 187 aa13.23□□□□□ -0.29
CXCL12-205ENST00000395794 RHBDD2Q6NTF9 364 aa13.23□□□□□ -0.29
CXCL12-205ENST00000395794 TCTN3Q6NUS6 607 aa13.23□□□□□ -0.29
CXCL12-205ENST00000395794 ASB18Q6ZVZ8 466 aa13.23□□□□□ -0.29
CXCL12-205ENST00000395794 PCGF5Q86SE9 256 aa13.23□□□□□ -0.29
CXCL12-205ENST00000395794 RAB43Q86YS6 212 aa13.23□□□□□ -0.29
CXCL12-205ENST00000395794 MCATQ8IVS2 390 aaKnown RBP13.23□□□□□ -0.29
CXCL12-205ENST00000395794 FAM20CQ8IXL6 584 aa13.23□□□□□ -0.29
CXCL12-205ENST00000395794 DNAJC22Q8N4W6 341 aa13.23□□□□□ -0.29
CXCL12-205ENST00000395794 TEX19Q8NA77 164 aa13.23□□□□□ -0.29
CXCL12-205ENST00000395794 DLG3Q92796 817 aa13.23□□□□□ -0.29
CXCL12-205ENST00000395794 TRIM4Q9C037 500 aa13.23□□□□□ -0.29
CXCL12-205ENST00000395794 CLMPQ9H6B4 373 aa13.23□□□□□ -0.29
CXCL12-205ENST00000395794 C20orf96Q9NUD7 363 aaPredicted RBP13.23□□□□□ -0.29
CXCL12-205ENST00000395794 EURLQ9NYK6 297 aa13.23□□□□□ -0.29
CXCL12-205ENST00000395794 IFT80Q9P2H3 777 aaPredicted RBP13.23□□□□□ -0.29
CXCL12-205ENST00000395794 NDOR1Q9UHB4 597 aa13.23□□□□□ -0.29
CXCL12-205ENST00000395794 ASIC3Q9UHC3 531 aa13.23□□□□□ -0.29
CXCL12-205ENST00000395794 TP53TG5Q9Y2B4 290 aa13.23□□□□□ -0.29
CXCL12-205ENST00000395794 NFS1Q9Y697 457 aa13.23□□□□□ -0.29
CXCL12-205ENST00000395794 COL6A6A6NMZ7 2263 aa13.23□□□□□ -0.29
CXCL12-205ENST00000395794 BOD1L1Q8NFC6 3051 aa13.22□□□□□ -0.29
CXCL12-205ENST00000395794 TARM1B6A8C7 271 aa13.22□□□□□ -0.29
CXCL12-205ENST00000395794 PYCARD-AS1I3L0S3 204 aa13.22□□□□□ -0.29
CXCL12-205ENST00000395794 ZNF185O15231 689 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms