RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 OR51E2Q9H255 320 aa13.99□□□□□ -0.17
CLIP2-203ENST00000395060 TNKS2Q9H2K2 1166 aa13.99□□□□□ -0.17
CLIP2-203ENST00000395060 RRAGCQ9HB90 399 aa13.99□□□□□ -0.17
CLIP2-203ENST00000395060 OPTCQ9UBM4 332 aa13.99□□□□□ -0.17
CLIP2-203ENST00000395060 PRG3Q9Y2Y8 225 aaPredicted RBP13.99□□□□□ -0.17
CLIP2-203ENST00000395060 TAF4O00268 1085 aa13.99□□□□□ -0.17
CLIP2-203ENST00000395060 MSH3P20585 1137 aa13.99□□□□□ -0.17
CLIP2-203ENST00000395060 GRK5P34947 590 aa13.99□□□□□ -0.17
CLIP2-203ENST00000395060 PHC1P78364 1004 aa13.99□□□□□ -0.17
CLIP2-203ENST00000395060 TAF1CQ15572 869 aaPredicted RBP13.99□□□□□ -0.17
CLIP2-203ENST00000395060 UPP1Q16831 310 aa13.99□□□□□ -0.17
CLIP2-203ENST00000395060 CXCL17Q6UXB2 119 aa13.99□□□□□ -0.17
CLIP2-203ENST00000395060 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.99□□□□□ -0.17
CLIP2-203ENST00000395060 DPP10Q8N608 796 aa13.99□□□□□ -0.17
CLIP2-203ENST00000395060 TSPEARQ8WU66 669 aa13.99□□□□□ -0.17
CLIP2-203ENST00000395060 YIPF6Q96EC8 236 aa13.99□□□□□ -0.17
CLIP2-203ENST00000395060 ZNF486Q96H40 463 aaPredicted RBP13.99□□□□□ -0.17
CLIP2-203ENST00000395060 SERPINB11Q96P15 392 aa13.99□□□□□ -0.17
CLIP2-203ENST00000395060 NUSAP1Q9BXS6 441 aaKnown RBP13.99□□□□□ -0.17
CLIP2-203ENST00000395060 RNF38Q9H0F5 515 aa13.99□□□□□ -0.17
CLIP2-203ENST00000395060 KRT84Q9NSB2 600 aa13.99□□□□□ -0.17
CLIP2-203ENST00000395060 GPRC5BQ9NZH0 403 aa13.99□□□□□ -0.17
CLIP2-203ENST00000395060 KLHL3Q9UH77 587 aa13.99□□□□□ -0.17
CLIP2-203ENST00000395060 SCN4AP35499 1836 aa13.99□□□□□ -0.17
CLIP2-203ENST00000395060 CBX4O00257 560 aa13.99□□□□□ -0.17
CLIP2-203ENST00000395060 ANKRD28O15084 1053 aa13.99□□□□□ -0.17
CLIP2-203ENST00000395060 HPRP00739 348 aa13.99□□□□□ -0.17
CLIP2-203ENST00000395060 FGF1P05230 155 aa13.99□□□□□ -0.17
CLIP2-203ENST00000395060 TACR1P25103 407 aa13.99□□□□□ -0.17
CLIP2-203ENST00000395060 KCNQ1P51787 676 aa13.99□□□□□ -0.17
CLIP2-203ENST00000395060 TOP3AQ13472 1001 aaPredicted RBP13.99□□□□□ -0.17
CLIP2-203ENST00000395060 ZNF404Q494X3 552 aa13.99□□□□□ -0.17
CLIP2-203ENST00000395060 OR8H2Q8N162 312 aa13.99□□□□□ -0.17
CLIP2-203ENST00000395060 SVOPLQ8N434 492 aa13.99□□□□□ -0.17
CLIP2-203ENST00000395060 PJA1Q8NG27 643 aa13.99□□□□□ -0.17
CLIP2-203ENST00000395060 BOCQ9BWV1 1114 aa13.99□□□□□ -0.17
CLIP2-203ENST00000395060 BBS2Q9BXC9 721 aa13.99□□□□□ -0.17
CLIP2-203ENST00000395060 EBPLQ9BY08 206 aa13.99□□□□□ -0.17
CLIP2-203ENST00000395060 PRRG3Q9BZD7 231 aa13.99□□□□□ -0.17
CLIP2-203ENST00000395060 DCAF13Q9NV06 445 aaKnown RBP13.99□□□□□ -0.17
CLIP2-203ENST00000395060 UGT2A1Q9Y4X1 527 aa13.99□□□□□ -0.17
CLIP2-203ENST00000395060 PRRC2BQ5JSZ5 2229 aaKnown RBP13.98□□□□□ -0.17
CLIP2-203ENST00000395060 C17orf102A2RUQ5 167 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 AREL1O15033 823 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 RGS5O15539 181 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 PCDHGA12O60330 932 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 KRT8P05787 483 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 POU2F1P14859 743 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 RHOQP17081 205 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 S100A1P23297 94 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 HOXC13P31276 330 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 VLDLRP98155 873 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 GNASQ5JWF2 1037 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 TPRG1LQ5T0D9 272 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 AFMIDQ63HM1 303 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 CPZQ66K79 652 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 CCDC71Q8IV32 467 aaPredicted RBP13.98□□□□□ -0.17
CLIP2-203ENST00000395060 P3H2Q8IVL5 708 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 RGL4Q8IZJ4 473 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 CACTIN-AS1Q8N1I8 211 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 UMODL1-AS1Q8N2C9 162 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 NKAPQ8N5F7 415 aaKnown RBP13.98□□□□□ -0.17
CLIP2-203ENST00000395060 DNASE1L2Q92874 299 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 BTN2A3PQ96KV6 586 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 PPP1R2P1Q96PQ5 205 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 HOXD1Q9GZZ0 328 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 LATS2Q9NRM7 1088 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 SIRT5Q9NXA8 310 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 USE1Q9NZ43 259 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 WWOXQ9NZC7 414 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 DLGAP4Q9Y2H0 992 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 ZNF236Q9UL36 1845 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 STX7O15400 261 aaKnown RBP13.98□□□□□ -0.17
CLIP2-203ENST00000395060 CCDC159P0C7I6 412 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 ZNF865P0CJ78 1059 aaPredicted RBP13.98□□□□□ -0.17
CLIP2-203ENST00000395060 SUOXP51687 545 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 CRYBB1P53674 252 aaPredicted RBP13.98□□□□□ -0.17
CLIP2-203ENST00000395060 MAP2K5Q13163 448 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 ARHGEF7Q14155 803 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 PDE12Q6L8Q7 609 aaKnown RBP13.98□□□□□ -0.17
CLIP2-203ENST00000395060 FAM217AQ8IXS0 508 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 METTL4Q8N3J2 472 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 PYURFQ96I23 114 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 ZFYVE19Q96K21 471 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 GORASP2Q9H8Y8 452 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 NECTIN3Q9NQS3 549 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 TMEM98Q9Y2Y6 226 aa13.98□□□□□ -0.17
CLIP2-203ENST00000395060 IDH3BO43837 385 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 PRAMEF12O95522 483 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 CPSF4O95639 269 aaKnown RBP13.97□□□□□ -0.17
CLIP2-203ENST00000395060 HLA-DPA1P20036 260 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 MZF1P28698 734 aaPredicted RBP13.97□□□□□ -0.17
CLIP2-203ENST00000395060 CASP3P42574 277 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 RPS24P62847 133 aaKnown RBP13.97□□□□□ -0.17
CLIP2-203ENST00000395060 ANGPTL8Q6UXH0 198 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 FAM151BQ6UXP7 276 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 USP43Q70EL4 1123 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 C16orf59Q7L2K0 433 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 PARP16Q8N5Y8 322 aa13.97□□□□□ -0.17
CLIP2-203ENST00000395060 UTP15Q8TED0 518 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms