RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 GBP5Q96PP8 586 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 PSMG3-AS1Q96PY0 264 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 IL22Q9GZX6 179 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 ACTR5Q9H9F9 607 aaPredicted RBP8.53□□□□□ -1.04
ATG4A-205ENST00000394892 MRM3Q9HC36 420 aaKnown RBP8.53□□□□□ -1.04
ATG4A-205ENST00000394892 MLXIPLQ9NP71 852 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 BFARQ9NZS9 450 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 DHCR7Q9UBM7 475 aaKnown RBP8.53□□□□□ -1.04
ATG4A-205ENST00000394892 POLG2Q9UHN1 485 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 TCFL5Q9UL49 500 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 VPS4AQ9UN37 437 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 PLAAQ9Y263 795 aa8.53□□□□□ -1.04
ATG4A-205ENST00000394892 FLNCQ14315 2725 aa8.52□□□□□ -1.05
ATG4A-205ENST00000394892 USP27XA6NNY8 438 aa8.52□□□□□ -1.05
ATG4A-205ENST00000394892 GOLGA6L6A8MZA4 724 aa8.52□□□□□ -1.05
ATG4A-205ENST00000394892 GOLGA8MH3BSY2 632 aa8.52□□□□□ -1.05
ATG4A-205ENST00000394892 CTSVO60911 334 aa8.52□□□□□ -1.05
ATG4A-205ENST00000394892 AGFG2O95081 481 aa8.52□□□□□ -1.05
ATG4A-205ENST00000394892 C1orf105O95561 183 aa8.52□□□□□ -1.05
ATG4A-205ENST00000394892 RAB40ALP0C0E4 278 aa8.52□□□□□ -1.05
ATG4A-205ENST00000394892 CD9P21926 228 aa8.52□□□□□ -1.05
ATG4A-205ENST00000394892 MCM3P25205 808 aa8.52□□□□□ -1.05
ATG4A-205ENST00000394892 PSMB5P28074 263 aa8.52□□□□□ -1.05
ATG4A-205ENST00000394892 FMO4P31512 558 aa8.52□□□□□ -1.05
ATG4A-205ENST00000394892 GRIA3P42263 894 aa8.52□□□□□ -1.05
ATG4A-205ENST00000394892 RAB28P51157 221 aa8.52□□□□□ -1.05
ATG4A-205ENST00000394892 EIF3BP55884 814 aaKnown RBP8.52□□□□□ -1.05
ATG4A-205ENST00000394892 CDK16Q00536 496 aa8.52□□□□□ -1.05
ATG4A-205ENST00000394892 PLOD1Q02809 727 aaPredicted RBP8.52□□□□□ -1.05
ATG4A-205ENST00000394892 FASTKQ14296 549 aaKnown RBP8.52□□□□□ -1.05
ATG4A-205ENST00000394892 NCF4Q15080 339 aa8.52□□□□□ -1.05
ATG4A-205ENST00000394892 ANKRD20A4Q4UJ75 823 aa8.52□□□□□ -1.05
ATG4A-205ENST00000394892 SYTL3Q4VX76 610 aa8.52□□□□□ -1.05
ATG4A-205ENST00000394892 ACSBG2Q5FVE4 666 aa8.52□□□□□ -1.05
ATG4A-205ENST00000394892 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.52□□□□□ -1.05
ATG4A-205ENST00000394892 C1orf189Q5VU69 101 aa8.52□□□□□ -1.05
ATG4A-205ENST00000394892 KIAA0930Q6ICG6 404 aaPredicted RBP8.52□□□□□ -1.05
ATG4A-205ENST00000394892 TCTN3Q6NUS6 607 aa8.52□□□□□ -1.05
ATG4A-205ENST00000394892 GSTA5Q7RTV2 222 aa8.52□□□□□ -1.05
ATG4A-205ENST00000394892 SYVN1Q86TM6 617 aa8.52□□□□□ -1.05
ATG4A-205ENST00000394892 DENND6AQ8IWF6 608 aa8.52□□□□□ -1.05
ATG4A-205ENST00000394892 NAT8LQ8N9F0 302 aa8.52□□□□□ -1.05
ATG4A-205ENST00000394892 OR2L8Q8NGY9 312 aa8.52□□□□□ -1.05
ATG4A-205ENST00000394892 ASZ1Q8WWH4 475 aa8.52□□□□□ -1.05
ATG4A-205ENST00000394892 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.52□□□□□ -1.05
ATG4A-205ENST00000394892 MAGOHBQ96A72 148 aaKnown RBP8.52□□□□□ -1.05
ATG4A-205ENST00000394892 TCTN2Q96GX1 697 aa8.52□□□□□ -1.05
ATG4A-205ENST00000394892 SIGLEC10Q96LC7 697 aa8.52□□□□□ -1.05
ATG4A-205ENST00000394892 ZNF285Q96NJ3 590 aa8.52□□□□□ -1.05
ATG4A-205ENST00000394892 MESP1Q9BRJ9 268 aa8.52□□□□□ -1.05
ATG4A-205ENST00000394892 NLNQ9BYT8 704 aa8.52□□□□□ -1.05
ATG4A-205ENST00000394892 TSR3Q9UJK0 312 aaKnown RBP8.52□□□□□ -1.05
ATG4A-205ENST00000394892 SPTBP11277 2137 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 ARGFXA6NJG6 315 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 ENO4A6NNW6 628 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 ARHGEF33A8MVX0 844 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 ISM1B1AKI9 464 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 E7EQ34 232 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 RASGRF2O14827 1237 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 NDUFS3O75489 264 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 BANF1O75531 89 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 RFPL1O75677 317 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 CEACAM4O75871 244 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 MATN4O95460 622 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 GAS8O95995 478 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 UMODP07911 640 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 CYP2A7P20853 494 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 IVDP26440 423 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 TTPAP49638 278 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 CLCN7P51798 805 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 RPS15P62841 145 aaKnown RBP8.51□□□□□ -1.05
ATG4A-205ENST00000394892 ATP1A4Q13733 1029 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 KIR2DS3Q14952 304 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 MSS51Q4VC12 460 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 AARS2Q5JTZ9 985 aaKnown RBP8.51□□□□□ -1.05
ATG4A-205ENST00000394892 FHL5Q5TD97 284 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 PAPD7Q5XG87 772 aaKnown RBP8.51□□□□□ -1.05
ATG4A-205ENST00000394892 PTRHD1Q6GMV3 140 aaKnown RBP8.51□□□□□ -1.05
ATG4A-205ENST00000394892 RHBDD2Q6NTF9 364 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 MRPL14Q6P1L8 145 aaKnown RBP8.51□□□□□ -1.05
ATG4A-205ENST00000394892 CYB5D1Q6P9G0 228 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 ZNF449Q6P9G9 518 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 FIGLAQ6QHK4 219 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 UNC5DQ6UXZ4 953 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 C4orf22Q6V702 233 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 CYHR1Q6ZMK1 362 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 ASB18Q6ZVZ8 466 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 COX15Q7KZN9 410 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 CILP2Q8IUL8 1156 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 MCATQ8IVS2 390 aaKnown RBP8.51□□□□□ -1.05
ATG4A-205ENST00000394892 IGDCC3Q8IVU1 814 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 DCUN1D3Q8IWE4 304 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 SHISA5Q8N114 240 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 ZNF655Q8N720 491 aaPredicted RBP8.51□□□□□ -1.05
ATG4A-205ENST00000394892 AMER2Q8N7J2 671 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 MCUQ8NE86 351 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.51□□□□□ -1.05
ATG4A-205ENST00000394892 MAIP1Q8WWC4 291 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 MIB2Q96AX9 1013 aa8.51□□□□□ -1.05
ATG4A-205ENST00000394892 CLIP3Q96DZ5 547 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms