RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 SLCO1B7G3V0H7 640 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 H3BNX3 289 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 ZNF701M0R085 212 aaPredicted RBP6.78□□□□□ -1.32
RTN4-205ENST00000394609 VILLO15195 856 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 DCXO43602 365 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 KLK8O60259 260 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 CLPTM1O96005 669 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 CAPNS1P04632 268 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 PCCBP05166 539 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 ENO1P06733 434 aaKnown RBP6.78□□□□□ -1.32
RTN4-205ENST00000394609 HOXB2P14652 356 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 C5AR1P21730 350 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 PBLDP30039 288 aaPredicted RBP6.78□□□□□ -1.32
RTN4-205ENST00000394609 PRDX3P30048 256 aaKnown RBP6.78□□□□□ -1.32
RTN4-205ENST00000394609 CPOXP36551 454 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 GDF5P43026 501 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 CPA2P48052 419 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 CD97P48960 835 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 COPAP53621 1224 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 NR1H2P55055 460 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 ARHGAP8P85298 464 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 GRSF1Q12849 480 aaKnown RBP eCLIP6.78□□□□□ -1.32
RTN4-205ENST00000394609 STARD3Q14849 445 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 PPP1R3AQ16821 1122 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 LSM12Q3MHD2 195 aaKnown RBP6.78□□□□□ -1.32
RTN4-205ENST00000394609 MMEL1Q495T6 779 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.78□□□□□ -1.32
RTN4-205ENST00000394609 PRRT3Q5FWE3 981 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 OGFRL1Q5TC84 451 aaPredicted RBP6.78□□□□□ -1.32
RTN4-205ENST00000394609 ZNF776Q68DI1 518 aaPredicted RBP6.78□□□□□ -1.32
RTN4-205ENST00000394609 TMEM220Q6QAJ8 160 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 Q7L0L9 218 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 RALGPS2Q86X27 583 aaPredicted RBP6.78□□□□□ -1.32
RTN4-205ENST00000394609 PHYKPLQ8IUZ5 450 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 ICA1LQ8NDH6 482 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 OR2T3Q8NH03 318 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 RAB7BQ96AH8 199 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 MPP4Q96JB8 637 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 LENG8Q96PV6 779 aaPredicted RBP6.78□□□□□ -1.32
RTN4-205ENST00000394609 VPS35Q96QK1 796 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 KCNA7Q96RP8 456 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 EGFL8Q99944 293 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 HGH1Q9BTY7 390 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 TRMOQ9BU70 441 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 OSBPL6Q9BZF3 934 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 OR2AG1Q9H205 316 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 ZBTB26Q9HCK0 441 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 VTI1BQ9UEU0 232 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 KLF15Q9UIH9 416 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 PCTPQ9UKL6 214 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 CNOT11Q9UKZ1 510 aaKnown RBP6.78□□□□□ -1.32
RTN4-205ENST00000394609 TMEM98Q9Y2Y6 226 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 PRKAB1Q9Y478 270 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 PTGDR2Q9Y5Y4 395 aa6.78□□□□□ -1.32
RTN4-205ENST00000394609 ELOA3CA0A087WX78 387 aaPredicted RBP6.77□□□□□ -1.33
RTN4-205ENST00000394609 A0A088AWK7 358 aa6.77□□□□□ -1.33
RTN4-205ENST00000394609 ATP6AP2A0A1C7CYW4 349 aa6.77□□□□□ -1.33
RTN4-205ENST00000394609 ELOA3DA6NLF2 546 aaPredicted RBP6.77□□□□□ -1.33
RTN4-205ENST00000394609 TMEM229AB2RXF0 380 aa6.77□□□□□ -1.33
RTN4-205ENST00000394609 STX16-NPEPL1H3BU86 382 aa6.77□□□□□ -1.33
RTN4-205ENST00000394609 E2F3O00716 465 aa6.77□□□□□ -1.33
RTN4-205ENST00000394609 STX16O14662 325 aa6.77□□□□□ -1.33
RTN4-205ENST00000394609 NPC1O15118 1278 aa6.77□□□□□ -1.33
RTN4-205ENST00000394609 RAD51BO15315 384 aa6.77□□□□□ -1.33
RTN4-205ENST00000394609 CBFA2T3O75081 653 aa6.77□□□□□ -1.33
RTN4-205ENST00000394609 ATP6AP2O75787 350 aa6.77□□□□□ -1.33
RTN4-205ENST00000394609 AP2A2O94973 939 aa6.77□□□□□ -1.33
RTN4-205ENST00000394609 PAK4O96013 591 aaPredicted RBP6.77□□□□□ -1.33
RTN4-205ENST00000394609 FTH1P02794 183 aa6.77□□□□□ -1.33
RTN4-205ENST00000394609 S100BP04271 92 aaPredicted RBP6.77□□□□□ -1.33
RTN4-205ENST00000394609 TFAP2AP05549 437 aa6.77□□□□□ -1.33
RTN4-205ENST00000394609 RPS17P08708 135 aaKnown RBP6.77□□□□□ -1.33
RTN4-205ENST00000394609 SMIM18P0DKX4 95 aa6.77□□□□□ -1.33
RTN4-205ENST00000394609 CBSLP0DN79 551 aa6.77□□□□□ -1.33
RTN4-205ENST00000394609 CD1EP15812 388 aa6.77□□□□□ -1.33
RTN4-205ENST00000394609 CBSP35520 551 aa6.77□□□□□ -1.33
RTN4-205ENST00000394609 ARL1P40616 181 aaPredicted RBP6.77□□□□□ -1.33
RTN4-205ENST00000394609 PREPP48147 710 aa6.77□□□□□ -1.33
RTN4-205ENST00000394609 HSPA7P48741 367 aa6.77□□□□□ -1.33
RTN4-205ENST00000394609 DPTQ07507 201 aa6.77□□□□□ -1.33
RTN4-205ENST00000394609 GALNT1Q10472 559 aaPredicted RBP6.77□□□□□ -1.33
RTN4-205ENST00000394609 TBL3Q12788 808 aaKnown RBP6.77□□□□□ -1.33
RTN4-205ENST00000394609 ABRQ12979 859 aa6.77□□□□□ -1.33
RTN4-205ENST00000394609 LCP2Q13094 533 aa6.77□□□□□ -1.33
RTN4-205ENST00000394609 SMAD4Q13485 552 aaKnown RBP6.77□□□□□ -1.33
RTN4-205ENST00000394609 CRY1Q16526 586 aa6.77□□□□□ -1.33
RTN4-205ENST00000394609 RBBP7Q16576 425 aa6.77□□□□□ -1.33
RTN4-205ENST00000394609 WSCD2Q2TBF2 565 aa6.77□□□□□ -1.33
RTN4-205ENST00000394609 ELOA3BQ3SY89 546 aa6.77□□□□□ -1.33
RTN4-205ENST00000394609 C1QTNF12Q5T7M4 302 aa6.77□□□□□ -1.33
RTN4-205ENST00000394609 ZFP1Q6P2D0 407 aa6.77□□□□□ -1.33
RTN4-205ENST00000394609 DOK6Q6PKX4 331 aa6.77□□□□□ -1.33
RTN4-205ENST00000394609 FAM124AQ86V42 546 aa6.77□□□□□ -1.33
RTN4-205ENST00000394609 TRAPPC5Q8IUR0 188 aa6.77□□□□□ -1.33
RTN4-205ENST00000394609 ERI1Q8IV48 349 aaKnown RBP6.77□□□□□ -1.33
RTN4-205ENST00000394609 ZNF295-AS1Q8N0V1 137 aa6.77□□□□□ -1.33
RTN4-205ENST00000394609 ELOA3Q8NG57 546 aa6.77□□□□□ -1.33
RTN4-205ENST00000394609 OR14C36Q8NHC7 312 aa6.77□□□□□ -1.33
RTN4-205ENST00000394609 ASZ1Q8WWH4 475 aa6.77□□□□□ -1.33
RTN4-205ENST00000394609 GAB3Q8WWW8 586 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms