RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 MENTQ9BUN1 341 aa14.76□□□□□ -0.05
CHMP3-202ENST00000393773 IRAK4Q9NWZ3 460 aa14.76□□□□□ -0.05
CHMP3-202ENST00000393773 CTSFQ9UBX1 484 aa14.76□□□□□ -0.05
CHMP3-202ENST00000393773 POLG2Q9UHN1 485 aa14.76□□□□□ -0.05
CHMP3-202ENST00000393773 KLHL20Q9Y2M5 609 aa14.76□□□□□ -0.05
CHMP3-202ENST00000393773 TDRKHQ9Y2W6 561 aaKnown RBP14.76□□□□□ -0.05
CHMP3-202ENST00000393773 PKDREJQ9NTG1 2253 aa14.76□□□□□ -0.05
CHMP3-202ENST00000393773 MACROD2A1Z1Q3 448 aa14.75□□□□□ -0.05
CHMP3-202ENST00000393773 KCNN4O15554 427 aa14.75□□□□□ -0.05
CHMP3-202ENST00000393773 AP2A1O95782 977 aa14.75□□□□□ -0.05
CHMP3-202ENST00000393773 ALBP02768 609 aa14.75□□□□□ -0.05
CHMP3-202ENST00000393773 CACNG1Q06432 222 aa14.75□□□□□ -0.05
CHMP3-202ENST00000393773 Q0VFX4 171 aa14.75□□□□□ -0.05
CHMP3-202ENST00000393773 PRPSAP1Q14558 356 aa14.75□□□□□ -0.05
CHMP3-202ENST00000393773 TUBB8Q3ZCM7 444 aa14.75□□□□□ -0.05
CHMP3-202ENST00000393773 KCTD11Q693B1 232 aa14.75□□□□□ -0.05
CHMP3-202ENST00000393773 NAPRTQ6XQN6 538 aa14.75□□□□□ -0.05
CHMP3-202ENST00000393773 TAS2R42Q7RTR8 314 aa14.75□□□□□ -0.05
CHMP3-202ENST00000393773 OVCH1Q7RTY7 1134 aa14.75□□□□□ -0.05
CHMP3-202ENST00000393773 LINC01555Q8NAE3 123 aa14.75□□□□□ -0.05
CHMP3-202ENST00000393773 DNAJB14Q8TBM8 379 aa14.75□□□□□ -0.05
CHMP3-202ENST00000393773 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.75□□□□□ -0.05
CHMP3-202ENST00000393773 ELMO1Q92556 727 aa14.75□□□□□ -0.05
CHMP3-202ENST00000393773 FAM118BQ9BPY3 351 aa14.75□□□□□ -0.05
CHMP3-202ENST00000393773 MESP1Q9BRJ9 268 aa14.75□□□□□ -0.05
CHMP3-202ENST00000393773 LHPPQ9H008 270 aa14.75□□□□□ -0.05
CHMP3-202ENST00000393773 MRM3Q9HC36 420 aaKnown RBP14.75□□□□□ -0.05
CHMP3-202ENST00000393773 ENAMQ9NRM1 1142 aa14.75□□□□□ -0.05
CHMP3-202ENST00000393773 NCOA6Q14686 2063 aaPredicted RBP14.75□□□□□ -0.05
CHMP3-202ENST00000393773 CCDC78A2IDD5 438 aa14.74□□□□□ -0.05
CHMP3-202ENST00000393773 ISM1B1AKI9 464 aa14.74□□□□□ -0.05
CHMP3-202ENST00000393773 DSCR3O14972 297 aa14.74□□□□□ -0.05
CHMP3-202ENST00000393773 FTH1P02794 183 aa14.74□□□□□ -0.05
CHMP3-202ENST00000393773 RBP3P10745 1247 aa14.74□□□□□ -0.05
CHMP3-202ENST00000393773 PSMA3P25788 255 aa14.74□□□□□ -0.05
CHMP3-202ENST00000393773 NSG1P42857 185 aa14.74□□□□□ -0.05
CHMP3-202ENST00000393773 TDGF1P3P51864 188 aa14.74□□□□□ -0.05
CHMP3-202ENST00000393773 ITIH4Q14624 930 aa14.74□□□□□ -0.05
CHMP3-202ENST00000393773 BRD3Q15059 726 aa14.74□□□□□ -0.05
CHMP3-202ENST00000393773 TLR1Q15399 786 aa14.74□□□□□ -0.05
CHMP3-202ENST00000393773 SYTL3Q4VX76 610 aa14.74□□□□□ -0.05
CHMP3-202ENST00000393773 SHISA6Q6ZSJ9 500 aa14.74□□□□□ -0.05
CHMP3-202ENST00000393773 VSTM4Q8IW00 320 aa14.74□□□□□ -0.05
CHMP3-202ENST00000393773 OR11G2Q8NGC1 345 aa14.74□□□□□ -0.05
CHMP3-202ENST00000393773 CDKN2AIPNLQ96HQ2 116 aa14.74□□□□□ -0.05
CHMP3-202ENST00000393773 ZNF285Q96NJ3 590 aa14.74□□□□□ -0.05
CHMP3-202ENST00000393773 PPP1R2P1Q96PQ5 205 aa14.74□□□□□ -0.05
CHMP3-202ENST00000393773 PHF12Q96QT6 1004 aa14.74□□□□□ -0.05
CHMP3-202ENST00000393773 SOX17Q9H6I2 414 aaPredicted RBP14.74□□□□□ -0.05
CHMP3-202ENST00000393773 EPS8L2Q9H6S3 715 aa14.74□□□□□ -0.05
CHMP3-202ENST00000393773 SMARCAL1Q9NZC9 954 aa14.74□□□□□ -0.05
CHMP3-202ENST00000393773 TFR2Q9UP52 801 aa14.74□□□□□ -0.05
CHMP3-202ENST00000393773 CACNA1CQ13936 2221 aa14.73□□□□□ -0.05
CHMP3-202ENST00000393773 OR51F1A6NGY5 319 aa14.73□□□□□ -0.05
CHMP3-202ENST00000393773 PRSS44E7EML9 344 aa14.73□□□□□ -0.05
CHMP3-202ENST00000393773 QSOX1O00391 747 aa14.73□□□□□ -0.05
CHMP3-202ENST00000393773 STK10O94804 968 aaKnown RBP14.73□□□□□ -0.05
CHMP3-202ENST00000393773 ALAS2P22557 587 aa14.73□□□□□ -0.05
CHMP3-202ENST00000393773 MCM3P25205 808 aa14.73□□□□□ -0.05
CHMP3-202ENST00000393773 FOXN2P32314 431 aa14.73□□□□□ -0.05
CHMP3-202ENST00000393773 CTNNA1P35221 906 aaKnown RBP14.73□□□□□ -0.05
CHMP3-202ENST00000393773 PTPN7P35236 360 aa14.73□□□□□ -0.05
CHMP3-202ENST00000393773 RAB28P51157 221 aa14.73□□□□□ -0.05
CHMP3-202ENST00000393773 ARSFP54793 590 aa14.73□□□□□ -0.05
CHMP3-202ENST00000393773 EIF3EP60228 445 aaKnown RBP14.73□□□□□ -0.05
CHMP3-202ENST00000393773 COPS2P61201 443 aa14.73□□□□□ -0.05
CHMP3-202ENST00000393773 MFAP5Q13361 173 aa14.73□□□□□ -0.05
CHMP3-202ENST00000393773 GRB7Q14451 532 aa14.73□□□□□ -0.05
CHMP3-202ENST00000393773 NAA30Q147X3 362 aaPredicted RBP14.73□□□□□ -0.05
CHMP3-202ENST00000393773 POU6F1Q14863 301 aa14.73□□□□□ -0.05
CHMP3-202ENST00000393773 IRAK1BP1Q5VVH5 260 aa14.73□□□□□ -0.05
CHMP3-202ENST00000393773 ZNF324BQ6AW86 544 aaPredicted RBP14.73□□□□□ -0.05
CHMP3-202ENST00000393773 FCRL6Q6DN72 434 aa14.73□□□□□ -0.05
CHMP3-202ENST00000393773 RPUSD3Q6P087 351 aaKnown RBP14.73□□□□□ -0.05
CHMP3-202ENST00000393773 FAM180AQ6UWF9 173 aa14.73□□□□□ -0.05
CHMP3-202ENST00000393773 FJX1Q86VR8 437 aa14.73□□□□□ -0.05
CHMP3-202ENST00000393773 TMTC1Q8IUR5 882 aa14.73□□□□□ -0.05
CHMP3-202ENST00000393773 MCATQ8IVS2 390 aaKnown RBP14.73□□□□□ -0.05
CHMP3-202ENST00000393773 PARP9Q8IXQ6 854 aa14.73□□□□□ -0.05
CHMP3-202ENST00000393773 DTWD1Q8N5C7 304 aa14.73□□□□□ -0.05
CHMP3-202ENST00000393773 MOCOSQ96EN8 888 aa14.73□□□□□ -0.05
CHMP3-202ENST00000393773 THOC3Q96J01 351 aaKnown RBP14.73□□□□□ -0.05
CHMP3-202ENST00000393773 FERMT1Q9BQL6 677 aa14.73□□□□□ -0.05
CHMP3-202ENST00000393773 CUTCQ9NTM9 273 aa14.73□□□□□ -0.05
CHMP3-202ENST00000393773 OLAHQ9NV23 265 aa14.73□□□□□ -0.05
CHMP3-202ENST00000393773 NXT1Q9UKK6 140 aaKnown RBP14.73□□□□□ -0.05
CHMP3-202ENST00000393773 EFR3BQ9Y2G0 817 aa14.73□□□□□ -0.05
CHMP3-202ENST00000393773 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.73□□□□□ -0.05
CHMP3-202ENST00000393773 HEATR5BQ9P2D3 2071 aa14.73□□□□□ -0.05
CHMP3-202ENST00000393773 PCNX1Q96RV3 2341 aa14.72□□□□□ -0.05
CHMP3-202ENST00000393773 CCDC168Q8NDH2 2452 aa14.72□□□□□ -0.05
CHMP3-202ENST00000393773 NF1P21359 2839 aa14.72□□□□□ -0.05
CHMP3-202ENST00000393773 FITM1A5D6W6 292 aa14.72□□□□□ -0.05
CHMP3-202ENST00000393773 MROH6A6NGR9 719 aa14.72□□□□□ -0.05
CHMP3-202ENST00000393773 VSTM2BA6NLU5 285 aa14.72□□□□□ -0.05
CHMP3-202ENST00000393773 TPH1P17752 444 aa14.72□□□□□ -0.05
CHMP3-202ENST00000393773 MSNP26038 577 aaKnown RBP14.72□□□□□ -0.05
CHMP3-202ENST00000393773 GRNP28799 593 aaKnown RBP14.72□□□□□ -0.05
CHMP3-202ENST00000393773 RBBP7Q16576 425 aa14.72□□□□□ -0.05
CHMP3-202ENST00000393773 CCDC181Q5TID7 509 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms