RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 C2orf73Q8N5S3 287 aaPredicted RBP18.37■□□□□ 0.53
PDLIM7-204ENST00000393546 LINC01555Q8NAE3 123 aa18.37■□□□□ 0.53
PDLIM7-204ENST00000393546 FBXO15Q8NCQ5 510 aaPredicted RBP18.37■□□□□ 0.53
PDLIM7-204ENST00000393546 LINGO1Q96FE5 620 aa18.37■□□□□ 0.53
PDLIM7-204ENST00000393546 OR2A14Q96R47 310 aa18.37■□□□□ 0.53
PDLIM7-204ENST00000393546 OR6C1Q96RD1 312 aa18.37■□□□□ 0.53
PDLIM7-204ENST00000393546 MCMBPQ9BTE3 642 aa18.37■□□□□ 0.53
PDLIM7-204ENST00000393546 PITPNM3Q9BZ71 974 aa18.37■□□□□ 0.53
PDLIM7-204ENST00000393546 TWSG1Q9GZX9 223 aa18.37■□□□□ 0.53
PDLIM7-204ENST00000393546 SYTL2Q9HCH5 934 aa18.37■□□□□ 0.53
PDLIM7-204ENST00000393546 SOHLH2Q9NX45 425 aa18.37■□□□□ 0.53
PDLIM7-204ENST00000393546 MTO1Q9Y2Z2 717 aaKnown RBP18.37■□□□□ 0.53
PDLIM7-204ENST00000393546 B3GALT1Q9Y5Z6 326 aa18.37■□□□□ 0.53
PDLIM7-204ENST00000393546 ASPMQ8IZT6 3477 aa18.36■□□□□ 0.53
PDLIM7-204ENST00000393546 MYO1CO00159 1063 aa18.36■□□□□ 0.53
PDLIM7-204ENST00000393546 C8GP07360 202 aa18.36■□□□□ 0.53
PDLIM7-204ENST00000393546 CD82P27701 267 aa18.36■□□□□ 0.53
PDLIM7-204ENST00000393546 HSD17B2P37059 387 aa18.36■□□□□ 0.53
PDLIM7-204ENST00000393546 EIF2S3P41091 472 aaKnown RBP18.36■□□□□ 0.53
PDLIM7-204ENST00000393546 TAS2R39P59534 338 aa18.36■□□□□ 0.53
PDLIM7-204ENST00000393546 POU4F1Q01851 419 aa18.36■□□□□ 0.53
PDLIM7-204ENST00000393546 ACY1Q03154 408 aa18.36■□□□□ 0.53
PDLIM7-204ENST00000393546 IL11RAQ14626 422 aa18.36■□□□□ 0.53
PDLIM7-204ENST00000393546 SLC5A12Q1EHB4 618 aa18.36■□□□□ 0.53
PDLIM7-204ENST00000393546 TEX35Q5T0J7 233 aa18.36■□□□□ 0.53
PDLIM7-204ENST00000393546 LRRC69Q6ZNQ3 347 aa18.36■□□□□ 0.53
PDLIM7-204ENST00000393546 RASGRP3Q8IV61 690 aa18.36■□□□□ 0.53
PDLIM7-204ENST00000393546 D2HGDHQ8N465 521 aa18.36■□□□□ 0.53
PDLIM7-204ENST00000393546 HMGCLL1Q8TB92 370 aa18.36■□□□□ 0.53
PDLIM7-204ENST00000393546 MCOLN3Q8TDD5 553 aa18.36■□□□□ 0.53
PDLIM7-204ENST00000393546 TSPAN17Q96FV3 270 aa18.36■□□□□ 0.53
PDLIM7-204ENST00000393546 DCBLD2Q96PD2 775 aa18.36■□□□□ 0.53
PDLIM7-204ENST00000393546 TRAPPC9Q96Q05 1148 aa18.36■□□□□ 0.53
PDLIM7-204ENST00000393546 CYTH2Q99418 400 aa18.36■□□□□ 0.53
PDLIM7-204ENST00000393546 PKP4Q99569 1192 aa18.36■□□□□ 0.53
PDLIM7-204ENST00000393546 RBBP8Q99708 897 aa18.36■□□□□ 0.53
PDLIM7-204ENST00000393546 CTRCQ99895 268 aa18.36■□□□□ 0.53
PDLIM7-204ENST00000393546 CDC42EP4Q9H3Q1 356 aaKnown RBP18.36■□□□□ 0.53
PDLIM7-204ENST00000393546 PDE7BQ9NP56 450 aa18.36■□□□□ 0.53
PDLIM7-204ENST00000393546 FOXJ2Q9P0K8 574 aa18.36■□□□□ 0.53
PDLIM7-204ENST00000393546 ACSL6Q9UKU0 697 aa18.36■□□□□ 0.53
PDLIM7-204ENST00000393546 A0A0J9YY10 115 aa18.35■□□□□ 0.53
PDLIM7-204ENST00000393546 SRRM3A6NNA2 597 aaPredicted RBP18.35■□□□□ 0.53
PDLIM7-204ENST00000393546 ZNF839A8K0R7 811 aa18.35■□□□□ 0.53
PDLIM7-204ENST00000393546 SLC16A5O15375 505 aa18.35■□□□□ 0.53
PDLIM7-204ENST00000393546 SYF2O95926 243 aaKnown RBP18.35■□□□□ 0.53
PDLIM7-204ENST00000393546 FOLR1P15328 257 aa18.35■□□□□ 0.53
PDLIM7-204ENST00000393546 ST6GAL1P15907 406 aa18.35■□□□□ 0.53
PDLIM7-204ENST00000393546 CYP2A7P20853 494 aa18.35■□□□□ 0.53
PDLIM7-204ENST00000393546 PEBP1P30086 187 aaKnown RBP18.35■□□□□ 0.53
PDLIM7-204ENST00000393546 PGGT1BP53609 377 aa18.35■□□□□ 0.53
PDLIM7-204ENST00000393546 USP10Q14694 798 aaKnown RBP18.35■□□□□ 0.53
PDLIM7-204ENST00000393546 ARHGAP19Q14CB8 494 aa18.35■□□□□ 0.53
PDLIM7-204ENST00000393546 CYP2A13Q16696 494 aa18.35■□□□□ 0.53
PDLIM7-204ENST00000393546 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.35■□□□□ 0.53
PDLIM7-204ENST00000393546 BPHLQ86WA6 291 aaPredicted RBP18.35■□□□□ 0.53
PDLIM7-204ENST00000393546 NKAPQ8N5F7 415 aaKnown RBP18.35■□□□□ 0.53
PDLIM7-204ENST00000393546 LMNTD1Q8N9Z9 388 aa18.35■□□□□ 0.53
PDLIM7-204ENST00000393546 FLVCR1-AS1Q8TAF5 88 aa18.35■□□□□ 0.53
PDLIM7-204ENST00000393546 DENND1AQ8TEH3 1009 aa18.35■□□□□ 0.53
PDLIM7-204ENST00000393546 PDLIM5Q96HC4 596 aaKnown RBP18.35■□□□□ 0.53
PDLIM7-204ENST00000393546 POPDC3Q9HBV1 291 aa18.35■□□□□ 0.53
PDLIM7-204ENST00000393546 APMAPQ9HDC9 416 aa18.35■□□□□ 0.53
PDLIM7-204ENST00000393546 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.35■□□□□ 0.53
PDLIM7-204ENST00000393546 BTRCQ9Y297 605 aa18.35■□□□□ 0.53
PDLIM7-204ENST00000393546 KRT87PA6NCN2 255 aa18.34■□□□□ 0.53
PDLIM7-204ENST00000393546 ACSL3O95573 720 aa18.34■□□□□ 0.53
PDLIM7-204ENST00000393546 TSPAN12O95859 305 aa18.34■□□□□ 0.53
PDLIM7-204ENST00000393546 EBLN1P0CF75 366 aa18.34■□□□□ 0.53
PDLIM7-204ENST00000393546 PVRP15151 417 aa18.34■□□□□ 0.53
PDLIM7-204ENST00000393546 OAS2P29728 719 aaKnown RBP18.34■□□□□ 0.53
PDLIM7-204ENST00000393546 TUBB4BP68371 445 aa18.34■□□□□ 0.53
PDLIM7-204ENST00000393546 SP140Q13342 867 aa18.34■□□□□ 0.53
PDLIM7-204ENST00000393546 TUBB3Q13509 450 aa18.34■□□□□ 0.53
PDLIM7-204ENST00000393546 KCNAB1Q14722 419 aa18.34■□□□□ 0.53
PDLIM7-204ENST00000393546 SF1Q15637 639 aaKnown RBP18.34■□□□□ 0.53
PDLIM7-204ENST00000393546 TRIM73Q86UV7 250 aa18.34■□□□□ 0.53
PDLIM7-204ENST00000393546 TAX1BP1Q86VP1 789 aa18.34■□□□□ 0.53
PDLIM7-204ENST00000393546 KCNE4Q8WWG9 221 aa18.34■□□□□ 0.53
PDLIM7-204ENST00000393546 PMEPA1Q969W9 287 aa18.34■□□□□ 0.53
PDLIM7-204ENST00000393546 NAF1Q96HR8 494 aaKnown RBP18.34■□□□□ 0.53
PDLIM7-204ENST00000393546 GPR22Q99680 433 aa18.34■□□□□ 0.53
PDLIM7-204ENST00000393546 SLC12A9Q9BXP2 914 aa18.34■□□□□ 0.53
PDLIM7-204ENST00000393546 DPH1Q9BZG8 443 aa18.34■□□□□ 0.53
PDLIM7-204ENST00000393546 KLHL25Q9H0H3 589 aa18.34■□□□□ 0.53
PDLIM7-204ENST00000393546 PARVBQ9HBI1 364 aa18.34■□□□□ 0.53
PDLIM7-204ENST00000393546 FGF21Q9NSA1 209 aa18.34■□□□□ 0.53
PDLIM7-204ENST00000393546 RARRES3Q9UL19 164 aa18.34■□□□□ 0.53
PDLIM7-204ENST00000393546 WDFY3Q8IZQ1 3526 aa18.33■□□□□ 0.53
PDLIM7-204ENST00000393546 PABPN1LA6NDY0 278 aaKnown RBP18.33■□□□□ 0.52
PDLIM7-204ENST00000393546 PRICKLE3O43900 615 aaPredicted RBP18.33■□□□□ 0.52
PDLIM7-204ENST00000393546 FAM155BO75949 473 aa18.33■□□□□ 0.52
PDLIM7-204ENST00000393546 FKBP9O95302 570 aa18.33■□□□□ 0.52
PDLIM7-204ENST00000393546 HIST1H2AGP0C0S8 130 aaPredicted RBP18.33■□□□□ 0.52
PDLIM7-204ENST00000393546 ERGP11308 486 aa18.33■□□□□ 0.52
PDLIM7-204ENST00000393546 FGF5P12034 268 aa18.33■□□□□ 0.52
PDLIM7-204ENST00000393546 ZNF37AP17032 561 aaPredicted RBP18.33■□□□□ 0.52
PDLIM7-204ENST00000393546 HIST1H2ADP20671 130 aa18.33■□□□□ 0.52
PDLIM7-204ENST00000393546 PNLIPRP1P54315 467 aa18.33■□□□□ 0.52
PDLIM7-204ENST00000393546 TMEM207Q6UWW9 146 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms