RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 ELFN1P0C7U0 828 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 THRBP10828 461 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 ATP4BP51164 291 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 CBX2Q14781 532 aaPredicted RBP10.3□□□□□ -0.76
CALD1-203ENST00000393118 PHKG1Q16816 387 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 NCEH1Q6PIU2 408 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 SLCO6A1Q86UG4 719 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 TMEM151AQ8N4L1 468 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 GPR150Q8NGU9 434 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 UTP15Q8TED0 518 aaKnown RBP10.3□□□□□ -0.76
CALD1-203ENST00000393118 NUDT8Q8WV74 236 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 ASZ1Q8WWH4 475 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 MYLIPQ8WY64 445 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 NCSTNQ92542 709 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 ITCHQ96J02 903 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 CLSTN3Q9BQT9 956 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 IRF2BPLQ9H1B7 796 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 FARSBQ9NSD9 589 aaKnown RBP10.3□□□□□ -0.76
CALD1-203ENST00000393118 CCM2LQ9NUG4 571 aaPredicted RBP10.3□□□□□ -0.76
CALD1-203ENST00000393118 DNAJC11Q9NVH1 559 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 IL17CQ9P0M4 197 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 USP22Q9UPT9 525 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 CENPXA8MT69 81 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 EIF3FO00303 357 aaPredicted RBP10.3□□□□□ -0.76
CALD1-203ENST00000393118 PRKD3O94806 890 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 PEX11BO96011 259 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 PGRP06401 933 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 FGF4P08620 206 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 ALOX5P09917 674 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 CTNNB1P35222 781 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 TM4SF4P48230 202 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 EEFSECP57772 596 aaKnown RBP10.3□□□□□ -0.76
CALD1-203ENST00000393118 RAB15P59190 212 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 CAMK2GQ13555 558 aaPredicted RBP10.3□□□□□ -0.76
CALD1-203ENST00000393118 LAPTM4AQ15012 233 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 CCDC85BQ15834 202 aaPredicted RBP10.3□□□□□ -0.76
CALD1-203ENST00000393118 PTCHD3Q3KNS1 767 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 CRTC3Q6UUV7 619 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 BEND7Q8N7W2 519 aaPredicted RBP10.3□□□□□ -0.76
CALD1-203ENST00000393118 MIEF1Q9NQG6 463 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 EXD2Q9NVH0 621 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 C3orf18Q9UK00 162 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 CXCR6O00574 342 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 POP4O95707 220 aaKnown RBP10.3□□□□□ -0.76
CALD1-203ENST00000393118 SNAP29O95721 258 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 FTH1P02794 183 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 PABPC1P11940 636 aaKnown RBP10.3□□□□□ -0.76
CALD1-203ENST00000393118 MTHFD2P13995 350 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 PRKACGP22612 351 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 CST5P28325 142 aaPredicted RBP10.3□□□□□ -0.76
CALD1-203ENST00000393118 HNF4AP41235 474 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 INPP1P49441 399 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 ST13P50502 369 aaKnown RBP10.3□□□□□ -0.76
CALD1-203ENST00000393118 TUBA1BP68363 451 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 TUBA4AP68366 448 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 FNDC3BQ53EP0 1204 aaKnown RBP10.3□□□□□ -0.76
CALD1-203ENST00000393118 RAET1GQ6H3X3 334 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 TUBA1AQ71U36 451 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 TMPRSS11BQ86T26 416 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 CMTR2Q8IYT2 770 aaKnown RBP10.3□□□□□ -0.76
CALD1-203ENST00000393118 NXPE1Q8N323 547 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 Q8N9G6 341 aaPredicted RBP10.3□□□□□ -0.76
CALD1-203ENST00000393118 WBP2Q969T9 261 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 TMBIM1Q969X1 311 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 ZDHHC7Q9NXF8 308 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 TMEM181Q9P2C4 612 aa10.3□□□□□ -0.76
CALD1-203ENST00000393118 OAS3Q9Y6K5 1087 aaKnown RBP10.3□□□□□ -0.76
CALD1-203ENST00000393118 A0A1B0GTL3 188 aa10.29□□□□□ -0.76
CALD1-203ENST00000393118 PRSS51A0A1B0GVH4 220 aa10.29□□□□□ -0.76
CALD1-203ENST00000393118 hCG_2039718K7EN88 272 aa10.29□□□□□ -0.76
CALD1-203ENST00000393118 IFRD1O00458 451 aaPredicted RBP10.29□□□□□ -0.76
CALD1-203ENST00000393118 TEX28O15482 410 aa10.29□□□□□ -0.76
CALD1-203ENST00000393118 DENRO43583 198 aaKnown RBP10.29□□□□□ -0.76
CALD1-203ENST00000393118 SERPINA1P01009 418 aa10.29□□□□□ -0.76
CALD1-203ENST00000393118 TRBC1P01850 177 aa10.29□□□□□ -0.76
CALD1-203ENST00000393118 UMPSP11172 480 aa10.29□□□□□ -0.76
CALD1-203ENST00000393118 HOXC8P31273 242 aa10.29□□□□□ -0.76
CALD1-203ENST00000393118 CD70P32970 193 aa10.29□□□□□ -0.76
CALD1-203ENST00000393118 PPM1AP35813 382 aa10.29□□□□□ -0.76
CALD1-203ENST00000393118 CAPGP40121 348 aa10.29□□□□□ -0.76
CALD1-203ENST00000393118 HTRA3P83110 453 aa10.29□□□□□ -0.76
CALD1-203ENST00000393118 INO80DQ53TQ3 878 aaPredicted RBP10.29□□□□□ -0.76
CALD1-203ENST00000393118 WDR45BQ5MNZ6 344 aa10.29□□□□□ -0.76
CALD1-203ENST00000393118 ELMSAN1Q6PJG2 1045 aa10.29□□□□□ -0.76
CALD1-203ENST00000393118 KCTD8Q6ZWB6 473 aa10.29□□□□□ -0.76
CALD1-203ENST00000393118 RGL4Q8IZJ4 473 aa10.29□□□□□ -0.76
CALD1-203ENST00000393118 OR8H2Q8N162 312 aa10.29□□□□□ -0.76
CALD1-203ENST00000393118 MINDY1Q8N5J2 469 aa10.29□□□□□ -0.76
CALD1-203ENST00000393118 METTL25Q8N6Q8 603 aa10.29□□□□□ -0.76
CALD1-203ENST00000393118 OR7A2PQ8NGA2 310 aa10.29□□□□□ -0.76
CALD1-203ENST00000393118 MAELQ96JY0 434 aaKnown RBP10.29□□□□□ -0.76
CALD1-203ENST00000393118 ZNF556Q9HAH1 456 aa10.29□□□□□ -0.76
CALD1-203ENST00000393118 IL26Q9NPH9 171 aa10.29□□□□□ -0.76
CALD1-203ENST00000393118 MRPS23Q9Y3D9 190 aaKnown RBP10.29□□□□□ -0.76
CALD1-203ENST00000393118 SAMHD1Q9Y3Z3 626 aaKnown RBP10.29□□□□□ -0.76
CALD1-203ENST00000393118 PCDHGA3Q9Y5H0 932 aa10.29□□□□□ -0.76
CALD1-203ENST00000393118 SDK1Q7Z5N4 2213 aa10.29□□□□□ -0.76
CALD1-203ENST00000393118 ACOT8O14734 319 aa10.29□□□□□ -0.76
CALD1-203ENST00000393118 PRAMEF12O95522 483 aa10.29□□□□□ -0.76
CALD1-203ENST00000393118 BPIP17213 487 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms