RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 KRTAP5-9P26371 169 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 PTGER4P35408 488 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 OPRL1P41146 370 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 LEPRP48357 1165 aaKnown RBP1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 LMAN1P49257 510 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 ZNF75DP51815 510 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 LBX1P52954 281 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 MFAP4P55083 255 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 TMF1P82094 1093 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 COX10Q12887 443 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 CALCOCO2Q13137 446 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 NFATC2Q13469 925 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 TNIP1Q15025 636 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 EFTUD2Q15029 972 aaKnown RBP eCLIP1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 PHKG1Q16816 387 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 ASTE1Q2TB18 679 aaPredicted RBP1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 MS4A18Q3C1V0 323 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 XKR3Q5GH77 459 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 FGD3Q5JSP0 725 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 FAM182AQ5T1J6 154 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 GRTP1Q5TC63 336 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 JAKMIP3Q5VZ66 844 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 TMEM198Q66K66 360 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 FAAH2Q6GMR7 532 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 LCLAT1Q6UWP7 414 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 TMEM207Q6UWW9 146 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 FRRS1Q6ZNA5 592 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 TMPRSS11FQ6ZWK6 438 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 PXKQ7Z7A4 578 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 RTN4RL2Q86UN3 420 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 KCNMB4Q86W47 210 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 TMEM173Q86WV6 379 aaPredicted RBP1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 MARCH9Q86YJ5 346 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 TMEM139Q8IV31 216 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 ZBED8Q8IZ13 594 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 ADGRF2Q8IZF7 708 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 EID3Q8N140 333 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 NDUFAF2Q8N183 169 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 FBXL16Q8N461 479 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 TTC30BQ8N4P2 665 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 MAPKAPK5-AS1Q8N8E1 139 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 OR4D10Q8NGI6 311 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 OR5M8Q8NGP6 311 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 MIPOL1Q8TD10 442 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 CHURC1Q8WUH1 139 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 SLAMF9Q96A28 289 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 AZIN2Q96A70 460 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 THOC1Q96FV9 657 aaKnown RBP1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 PERPQ96FX8 193 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 ZNF486Q96H40 463 aaPredicted RBP1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 SFXN2Q96NB2 322 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 NECTIN4Q96NY8 510 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 FNBP1Q96RU3 617 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 RAD9AQ99638 391 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 KCNK15Q9H427 330 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 SYNCQ9H7C4 482 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 ATP13A3Q9H7F0 1226 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 HEXA-AS1Q9H8Q6 139 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 A4GALTQ9NPC4 353 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 SAGE1Q9NXZ1 904 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 GTSE1Q9NYZ3 720 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 IL17BQ9UHF5 180 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 PRO0461Q9UI25 63 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 LNPEPQ9UIQ6 1025 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 ZHX1Q9UKY1 873 aaPredicted RBP1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 ZNF148Q9UQR1 794 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 TRIM17Q9Y577 477 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 PCNX3Q9H6A9 2034 aa1.1□□□□□ -2.23
SNORD28B-201ENST00000390993 MYH15Q9Y2K3 1946 aa1.09□□□□□ -2.23
SNORD28B-201ENST00000390993 LNP1A1A4G5 178 aa1.09□□□□□ -2.23
SNORD28B-201ENST00000390993 ACOD1A6NK06 481 aa1.09□□□□□ -2.23
SNORD28B-201ENST00000390993 ENO4A6NNW6 628 aa1.09□□□□□ -2.23
SNORD28B-201ENST00000390993 MEIS2O14770 477 aa1.09□□□□□ -2.23
SNORD28B-201ENST00000390993 OGTO15294 1046 aa1.09□□□□□ -2.23
SNORD28B-201ENST00000390993 TPD52L2O43399 206 aaKnown RBP1.09□□□□□ -2.23
SNORD28B-201ENST00000390993 BCL2L11O43521 198 aa1.09□□□□□ -2.23
SNORD28B-201ENST00000390993 GPRIN2O60269 458 aa1.09□□□□□ -2.23
SNORD28B-201ENST00000390993 TSPAN9O75954 239 aa1.09□□□□□ -2.23
SNORD28B-201ENST00000390993 KRT33AO76009 404 aa1.09□□□□□ -2.23
SNORD28B-201ENST00000390993 BAIAP3O94812 1187 aa1.09□□□□□ -2.23
SNORD28B-201ENST00000390993 SEC24AO95486 1093 aa1.09□□□□□ -2.23
SNORD28B-201ENST00000390993 TRUB2O95900 331 aaKnown RBP1.09□□□□□ -2.23
SNORD28B-201ENST00000390993 AGR2O95994 175 aa1.09□□□□□ -2.23
SNORD28B-201ENST00000390993 HSPA8P11142 646 aaKnown RBP1.09□□□□□ -2.23
SNORD28B-201ENST00000390993 ATP1A3P13637 1013 aa1.09□□□□□ -2.23
SNORD28B-201ENST00000390993 MMP9P14780 707 aa1.09□□□□□ -2.23
SNORD28B-201ENST00000390993 RPL35AP18077 110 aaKnown RBP1.09□□□□□ -2.23
SNORD28B-201ENST00000390993 CETN2P41208 172 aa1.09□□□□□ -2.23
SNORD28B-201ENST00000390993 RGS2P41220 211 aa1.09□□□□□ -2.23
SNORD28B-201ENST00000390993 ZFP36L2P47974 494 aaKnown RBP1.09□□□□□ -2.23
SNORD28B-201ENST00000390993 RPL34P49207 117 aaKnown RBP1.09□□□□□ -2.23
SNORD28B-201ENST00000390993 ALDH3A2P51648 485 aa1.09□□□□□ -2.23
SNORD28B-201ENST00000390993 TPD52P55327 224 aaPredicted RBP1.09□□□□□ -2.23
SNORD28B-201ENST00000390993 KRTAP12-2P59991 146 aa1.09□□□□□ -2.23
SNORD28B-201ENST00000390993 KRT32Q14532 448 aa1.09□□□□□ -2.23
SNORD28B-201ENST00000390993 SQLEQ14534 574 aa1.09□□□□□ -2.23
SNORD28B-201ENST00000390993 ZNF74Q16587 644 aa1.09□□□□□ -2.23
SNORD28B-201ENST00000390993 C15orf59Q2T9L4 293 aaPredicted RBP1.09□□□□□ -2.23
SNORD28B-201ENST00000390993 ITPRIPL2Q3MIP1 535 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms