RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 FASTKD1Q53R41 847 aaKnown RBP16.22■□□□□ 0.19
SMN2-201ENST00000380741 MRPL14Q6P1L8 145 aaKnown RBP16.22■□□□□ 0.19
SMN2-201ENST00000380741 LDB1Q86U70 411 aaPredicted RBP16.22■□□□□ 0.19
SMN2-201ENST00000380741 TAX1BP1Q86VP1 789 aa16.22■□□□□ 0.19
SMN2-201ENST00000380741 GALNT16Q8N428 558 aa16.22■□□□□ 0.19
SMN2-201ENST00000380741 C2orf73Q8N5S3 287 aaPredicted RBP16.22■□□□□ 0.19
SMN2-201ENST00000380741 LMNTD1Q8N9Z9 388 aa16.22■□□□□ 0.19
SMN2-201ENST00000380741 CLEC1AQ8NC01 280 aa16.22■□□□□ 0.19
SMN2-201ENST00000380741 CFAP61Q8NHU2 1237 aa16.22■□□□□ 0.19
SMN2-201ENST00000380741 C1orf54Q8WWF1 131 aa16.22■□□□□ 0.19
SMN2-201ENST00000380741 ASZ1Q8WWH4 475 aa16.22■□□□□ 0.19
SMN2-201ENST00000380741 FER1L6-AS2Q96M78 137 aa16.22■□□□□ 0.19
SMN2-201ENST00000380741 NDC1Q9BTX1 674 aa16.22■□□□□ 0.19
SMN2-201ENST00000380741 RAB6BQ9NRW1 208 aa16.22■□□□□ 0.19
SMN2-201ENST00000380741 P4HTMQ9NXG6 502 aa16.22■□□□□ 0.19
SMN2-201ENST00000380741 EURLQ9NYK6 297 aa16.22■□□□□ 0.19
SMN2-201ENST00000380741 C5AR2Q9P296 337 aa16.22■□□□□ 0.19
SMN2-201ENST00000380741 MAP10Q9P2G4 905 aa16.22■□□□□ 0.19
SMN2-201ENST00000380741 ZNF148Q9UQR1 794 aa16.22■□□□□ 0.19
SMN2-201ENST00000380741 UNC79Q9P2D8 2635 aa16.21■□□□□ 0.19
SMN2-201ENST00000380741 MASP2O00187 686 aa16.21■□□□□ 0.19
SMN2-201ENST00000380741 PEX12O00623 359 aa16.21■□□□□ 0.19
SMN2-201ENST00000380741 UMODP07911 640 aa16.21■□□□□ 0.19
SMN2-201ENST00000380741 CD63P08962 238 aa16.21■□□□□ 0.19
SMN2-201ENST00000380741 GCGRP47871 477 aa16.21■□□□□ 0.19
SMN2-201ENST00000380741 PRAMEP78395 509 aa16.21■□□□□ 0.19
SMN2-201ENST00000380741 MRPL49Q13405 166 aaKnown RBP16.21■□□□□ 0.19
SMN2-201ENST00000380741 GRB7Q14451 532 aa16.21■□□□□ 0.19
SMN2-201ENST00000380741 SEL1L2Q5TEA6 688 aa16.21■□□□□ 0.19
SMN2-201ENST00000380741 HIST2H2BCQ6DN03 193 aa16.21■□□□□ 0.19
SMN2-201ENST00000380741 NLRP9Q7RTR0 991 aa16.21■□□□□ 0.19
SMN2-201ENST00000380741 PPP1R32Q7Z5V6 425 aa16.21■□□□□ 0.19
SMN2-201ENST00000380741 SLC13A5Q86YT5 568 aaPredicted RBP16.21■□□□□ 0.19
SMN2-201ENST00000380741 DCUN1D3Q8IWE4 304 aa16.21■□□□□ 0.19
SMN2-201ENST00000380741 SSC4DQ8WTU2 575 aa16.21■□□□□ 0.19
SMN2-201ENST00000380741 PTERQ96BW5 349 aa16.21■□□□□ 0.19
SMN2-201ENST00000380741 C19orf60Q96EN9 201 aa16.21■□□□□ 0.19
SMN2-201ENST00000380741 IL17FQ96PD4 163 aa16.21■□□□□ 0.19
SMN2-201ENST00000380741 CARD6Q9BX69 1037 aa16.21■□□□□ 0.19
SMN2-201ENST00000380741 TSSK1BQ9BXA7 367 aa16.21■□□□□ 0.19
SMN2-201ENST00000380741 FRMD8P1Q9BZ68 369 aaPredicted RBP16.21■□□□□ 0.19
SMN2-201ENST00000380741 SLC22A11Q9NSA0 550 aa16.21■□□□□ 0.19
SMN2-201ENST00000380741 MARCH4Q9P2E8 410 aaPredicted RBP16.21■□□□□ 0.19
SMN2-201ENST00000380741 DOCK10Q96BY6 2186 aa16.2■□□□□ 0.18
SMN2-201ENST00000380741 RPN2P04844 631 aa16.2■□□□□ 0.18
SMN2-201ENST00000380741 APRTP07741 180 aa16.2■□□□□ 0.18
SMN2-201ENST00000380741 RNF224P0DH78 156 aa16.2■□□□□ 0.18
SMN2-201ENST00000380741 ITGAXP20702 1163 aa16.2■□□□□ 0.18
SMN2-201ENST00000380741 CD9P21926 228 aa16.2■□□□□ 0.18
SMN2-201ENST00000380741 AOAHP28039 575 aa16.2■□□□□ 0.18
SMN2-201ENST00000380741 PPARGP37231 505 aaPredicted RBP16.2■□□□□ 0.18
SMN2-201ENST00000380741 SNX1Q13596 522 aa16.2■□□□□ 0.18
SMN2-201ENST00000380741 MYBPC3Q14896 1274 aa16.2■□□□□ 0.18
SMN2-201ENST00000380741 EIF2S3LQ2VIR3 472 aaKnown RBP16.2■□□□□ 0.18
SMN2-201ENST00000380741 PLEKHN1Q494U1 663 aaPredicted RBP16.2■□□□□ 0.18
SMN2-201ENST00000380741 C4orf17Q53FE4 359 aa16.2■□□□□ 0.18
SMN2-201ENST00000380741 AARS2Q5JTZ9 985 aaKnown RBP16.2■□□□□ 0.18
SMN2-201ENST00000380741 UNC5DQ6UXZ4 953 aa16.2■□□□□ 0.18
SMN2-201ENST00000380741 TTLL10Q6ZVT0 673 aa16.2■□□□□ 0.18
SMN2-201ENST00000380741 MCATQ8IVS2 390 aaKnown RBP16.2■□□□□ 0.18
SMN2-201ENST00000380741 KRT222Q8N1A0 295 aa16.2■□□□□ 0.18
SMN2-201ENST00000380741 RNF10Q8N5U6 811 aaKnown RBP16.2■□□□□ 0.18
SMN2-201ENST00000380741 PPHLN1Q8NEY8 458 aaKnown RBP16.2■□□□□ 0.18
SMN2-201ENST00000380741 PEX13Q92968 403 aa16.2■□□□□ 0.18
SMN2-201ENST00000380741 SLC29A3Q9BZD2 475 aa16.2■□□□□ 0.18
SMN2-201ENST00000380741 ZNF552Q9H707 407 aaPredicted RBP16.2■□□□□ 0.18
SMN2-201ENST00000380741 CATSPERZQ9NTU4 200 aa16.2■□□□□ 0.18
SMN2-201ENST00000380741 PLEKHB1Q9UF11 243 aaPredicted RBP16.2■□□□□ 0.18
SMN2-201ENST00000380741 PRMT5O14744 637 aaPredicted RBP16.19■□□□□ 0.18
SMN2-201ENST00000380741 KRT86O43790 486 aa16.19■□□□□ 0.18
SMN2-201ENST00000380741 SLCO2B1O94956 709 aa16.19■□□□□ 0.18
SMN2-201ENST00000380741 IGHEP01854 428 aa16.19■□□□□ 0.18
SMN2-201ENST00000380741 ALPPP05187 535 aa16.19■□□□□ 0.18
SMN2-201ENST00000380741 APOA4P06727 396 aa16.19■□□□□ 0.18
SMN2-201ENST00000380741 ALAS2P22557 587 aa16.19■□□□□ 0.18
SMN2-201ENST00000380741 VARSP26640 1264 aaKnown RBP16.19■□□□□ 0.18
SMN2-201ENST00000380741 FCRL6Q6DN72 434 aa16.19■□□□□ 0.18
SMN2-201ENST00000380741 CCDC89Q8N998 374 aa16.19■□□□□ 0.18
SMN2-201ENST00000380741 OR2L8Q8NGY9 312 aa16.19■□□□□ 0.18
SMN2-201ENST00000380741 DLG3Q92796 817 aa16.19■□□□□ 0.18
SMN2-201ENST00000380741 SLC22A18Q96BI1 424 aa16.19■□□□□ 0.18
SMN2-201ENST00000380741 SNRNP40Q96DI7 357 aaKnown RBP16.19■□□□□ 0.18
SMN2-201ENST00000380741 CHRAC1Q9NRG0 131 aa16.19■□□□□ 0.18
SMN2-201ENST00000380741 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.19■□□□□ 0.18
SMN2-201ENST00000380741 PAK5Q9P286 719 aa16.19■□□□□ 0.18
SMN2-201ENST00000380741 ANAPC5Q9UJX4 755 aa16.19■□□□□ 0.18
SMN2-201ENST00000380741 B3GNT3Q9Y2A9 372 aa16.19■□□□□ 0.18
SMN2-201ENST00000380741 NOTCH2Q04721 2471 aa16.19■□□□□ 0.18
SMN2-201ENST00000380741 MDC1Q14676 2089 aaKnown RBP16.18■□□□□ 0.18
SMN2-201ENST00000380741 A0A1B0GX78 115 aa16.18■□□□□ 0.18
SMN2-201ENST00000380741 RASGRF2O14827 1237 aa16.18■□□□□ 0.18
SMN2-201ENST00000380741 CD3EAPO15446 510 aaKnown RBP16.18■□□□□ 0.18
SMN2-201ENST00000380741 S1PR4O95977 384 aa16.18■□□□□ 0.18
SMN2-201ENST00000380741 ZSCAN5DPP0CG00 497 aa16.18■□□□□ 0.18
SMN2-201ENST00000380741 MCM3P25205 808 aa16.18■□□□□ 0.18
SMN2-201ENST00000380741 GRIA3P42263 894 aa16.18■□□□□ 0.18
SMN2-201ENST00000380741 TTPAP49638 278 aa16.18■□□□□ 0.18
SMN2-201ENST00000380741 ARSFP54793 590 aa16.18■□□□□ 0.18
SMN2-201ENST00000380741 SESN2P58004 480 aaPredicted RBP16.18■□□□□ 0.18
SMN2-201ENST00000380741 TMED2Q15363 201 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms