RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 MAGEL2Q9UJ55 1249 aa10.22□□□□□ -0.77
POLR2J3-201ENST00000379340 RIF1Q5UIP0 2472 aaKnown RBP10.21□□□□□ -0.77
POLR2J3-201ENST00000379340 KMT2EQ8IZD2 1858 aa10.21□□□□□ -0.77
POLR2J3-201ENST00000379340 KIAA1549LQ6ZVL6 1849 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 KCNE1BA0A087WTH5 132 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 DPPA5A6NC42 116 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 ZNF839A8K0R7 811 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 FADS2P1A8MWK0 482 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 C9JVG2 144 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 TXNDC9O14530 226 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 FFAR3O14843 346 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 PER2O15055 1255 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 GPR42O15529 346 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 SGTAO43765 313 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 GFRA3O60609 400 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 RNASEH1O60930 286 aaKnown RBP10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 SEC22BO75396 215 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 PSIP1O75475 530 aaKnown RBP10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 UBTFL6P0CB48 400 aaPredicted RBP10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 BMP2P12643 396 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 MAP4P27816 1152 aaKnown RBP10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 HNRNPFP52597 415 aaKnown RBP10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 CHN2P52757 468 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 GRM2Q14416 872 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 KIAA0040Q15053 153 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 ACOX1Q15067 660 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 PDGFRLQ15198 375 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 SMAD2Q15796 467 aaKnown RBP10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 BCL7AQ4VC05 210 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 TBCELQ5QJ74 424 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 LIPJQ5W064 366 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 OR52E8Q6IFG1 317 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 MBOAT1Q6ZNC8 495 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 MSANTD1Q6ZTZ1 278 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 PARS2Q7L3T8 475 aaKnown RBP10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 KIAA2013Q8IYS2 634 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 RGL4Q8IZJ4 473 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 ITFG1Q8TB96 612 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 DNAJB14Q8TBM8 379 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 SLC13A3Q8WWT9 602 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 SELENOMQ8WWX9 145 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 SORCS1Q8WY21 1168 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 LRTOMTQ8WZ04 291 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 POP5Q969H6 163 aaKnown RBP10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 TMEM159Q96B96 161 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 AP2M1Q96CW1 435 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 CMTM7Q96FZ5 175 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 CCDC138Q96M89 665 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 COQ10AQ96MF6 247 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 FOPNLQ96NB1 174 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 CGREF1Q99674 301 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 SH3GL1Q99961 368 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 CCM2Q9BSQ5 444 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 FAM192AQ9GZU8 254 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 LMAN2LQ9H0V9 348 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 ELOVL6Q9H5J4 265 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 GEMIN8Q9NWZ8 242 aaKnown RBP10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 PCDHB3Q9Y5E6 796 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 AP4B1Q9Y6B7 739 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 DENND4AQ7Z401 1863 aa10.21□□□□□ -0.78
POLR2J3-201ENST00000379340 KPNA3O00505 521 aaPredicted RBP10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 LINC01565O15544 149 aa10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 MBTPS2O43462 519 aa10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 CATP04040 527 aaKnown RBP10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 JUPP14923 745 aa10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 ZNF26P17031 533 aaPredicted RBP10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 EPORP19235 508 aa10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 CASP2P42575 452 aa10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 PCDH1Q08174 1060 aa10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 HYAL1Q12794 435 aa10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 CSTF3Q12996 717 aaKnown RBP10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 CBX2Q14781 532 aaPredicted RBP10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 HNRNPA1L2Q32P51 320 aaKnown RBP10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 PTCHD3Q3KNS1 767 aa10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 USP39Q53GS9 565 aaKnown RBP10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 INTS11Q5TA45 600 aaKnown RBP10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 SLC2A7Q6PXP3 512 aa10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 SERPINA13PQ6UXR4 307 aa10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 DLEU7Q6UYE1 221 aa10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 NLRP8Q86W28 1048 aa10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 VRK3Q8IV63 474 aa10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 LIX1Q8N485 282 aa10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 FBXO15Q8NCQ5 510 aaPredicted RBP10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 PAPD5Q8NDF8 572 aaKnown RBP10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 CANT1Q8WVQ1 401 aa10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 EDAQ92838 391 aa10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 SMARCD2Q92925 531 aa10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 DTD2Q96FN9 168 aa10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 METTL2AQ96IZ6 378 aaKnown RBP10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 ZNF597Q96LX8 424 aa10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 ASB16Q96NS5 453 aa10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 TRAPPC9Q96Q05 1148 aa10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 OSBPL11Q9BXB4 747 aa10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 OSBPL6Q9BZF3 934 aa10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 CLMPQ9H6B4 373 aa10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 TRPV4Q9HBA0 871 aa10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 DZANK1Q9NVP4 752 aa10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 THG1LQ9NWX6 298 aaKnown RBP10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 DEC1Q9P2X7 70 aa10.2□□□□□ -0.78
POLR2J3-201ENST00000379340 TCRBV5S2A0A599 114 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms