RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 DPH2Q9BQC3 489 aaPredicted RBP18.27■□□□□ 0.52
TMEM88B-201ENST00000378821 MLXIPLQ9NP71 852 aa18.27■□□□□ 0.52
TMEM88B-201ENST00000378821 PCMTD2Q9NV79 361 aa18.27■□□□□ 0.52
TMEM88B-201ENST00000378821 MAN2B2Q9Y2E5 1009 aa18.27■□□□□ 0.52
TMEM88B-201ENST00000378821 SNX24Q9Y343 169 aa18.27■□□□□ 0.52
TMEM88B-201ENST00000378821 FAM187AA6NFU0 413 aa18.26■□□□□ 0.51
TMEM88B-201ENST00000378821 PRMT5O14744 637 aaPredicted RBP18.26■□□□□ 0.51
TMEM88B-201ENST00000378821 URI1O94763 535 aaPredicted RBP18.26■□□□□ 0.51
TMEM88B-201ENST00000378821 CHRM5P08912 532 aaPredicted RBP18.26■□□□□ 0.51
TMEM88B-201ENST00000378821 PVRP15151 417 aa18.26■□□□□ 0.51
TMEM88B-201ENST00000378821 UGT2B7P16662 529 aa18.26■□□□□ 0.51
TMEM88B-201ENST00000378821 CCR7P32248 378 aa18.26■□□□□ 0.51
TMEM88B-201ENST00000378821 ITGA1P56199 1179 aa18.26■□□□□ 0.51
TMEM88B-201ENST00000378821 FOXK1P85037 733 aa18.26■□□□□ 0.51
TMEM88B-201ENST00000378821 KLRB1Q12918 225 aa18.26■□□□□ 0.51
TMEM88B-201ENST00000378821 BBS9Q3SYG4 887 aa18.26■□□□□ 0.51
TMEM88B-201ENST00000378821 DNAJC21Q5F1R6 531 aaKnown RBP18.26■□□□□ 0.51
TMEM88B-201ENST00000378821 MRNIPQ6NTE8 343 aa18.26■□□□□ 0.51
TMEM88B-201ENST00000378821 ZNF592Q92610 1267 aa18.26■□□□□ 0.51
TMEM88B-201ENST00000378821 WDR83Q9BRX9 315 aaKnown RBP18.26■□□□□ 0.51
TMEM88B-201ENST00000378821 MENTQ9BUN1 341 aa18.26■□□□□ 0.51
TMEM88B-201ENST00000378821 P2RY12Q9H244 342 aa18.26■□□□□ 0.51
TMEM88B-201ENST00000378821 ACTR5Q9H9F9 607 aaPredicted RBP18.26■□□□□ 0.51
TMEM88B-201ENST00000378821 FAM60AQ9NP50 221 aa18.26■□□□□ 0.51
TMEM88B-201ENST00000378821 SEC16AO15027 2179 aa18.25■□□□□ 0.51
TMEM88B-201ENST00000378821 IQCF5A8MTL0 148 aa18.25■□□□□ 0.51
TMEM88B-201ENST00000378821 SMAPO00193 183 aa18.25■□□□□ 0.51
TMEM88B-201ENST00000378821 NDUFS3O75489 264 aa18.25■□□□□ 0.51
TMEM88B-201ENST00000378821 SLCO2B1O94956 709 aa18.25■□□□□ 0.51
TMEM88B-201ENST00000378821 F7P08709 466 aaPredicted RBP18.25■□□□□ 0.51
TMEM88B-201ENST00000378821 HBQ1P09105 142 aa18.25■□□□□ 0.51
TMEM88B-201ENST00000378821 PGAM1P18669 254 aa18.25■□□□□ 0.51
TMEM88B-201ENST00000378821 OGNP20774 298 aaKnown RBP18.25■□□□□ 0.51
TMEM88B-201ENST00000378821 CKAP4Q07065 602 aaKnown RBP18.25■□□□□ 0.51
TMEM88B-201ENST00000378821 BRD3Q15059 726 aa18.25■□□□□ 0.51
TMEM88B-201ENST00000378821 ZIC1Q15915 447 aa18.25■□□□□ 0.51
TMEM88B-201ENST00000378821 KYNUQ16719 465 aa18.25■□□□□ 0.51
TMEM88B-201ENST00000378821 NEPROQ6NW34 567 aa18.25■□□□□ 0.51
TMEM88B-201ENST00000378821 FAM198BQ6UWH4 519 aa18.25■□□□□ 0.51
TMEM88B-201ENST00000378821 CILP2Q8IUL8 1156 aa18.25■□□□□ 0.51
TMEM88B-201ENST00000378821 IGDCC3Q8IVU1 814 aa18.25■□□□□ 0.51
TMEM88B-201ENST00000378821 SYTL1Q8IYJ3 562 aa18.25■□□□□ 0.51
TMEM88B-201ENST00000378821 KRT222Q8N1A0 295 aa18.25■□□□□ 0.51
TMEM88B-201ENST00000378821 C19orf47Q8N9M1 422 aaKnown RBP18.25■□□□□ 0.51
TMEM88B-201ENST00000378821 ASZ1Q8WWH4 475 aa18.25■□□□□ 0.51
TMEM88B-201ENST00000378821 LPGAT1Q92604 370 aa18.25■□□□□ 0.51
TMEM88B-201ENST00000378821 TRIM55Q9BYV6 548 aa18.25■□□□□ 0.51
TMEM88B-201ENST00000378821 DPH5Q9H2P9 285 aa18.25■□□□□ 0.51
TMEM88B-201ENST00000378821 SPHK1Q9NYA1 384 aa18.25■□□□□ 0.51
TMEM88B-201ENST00000378821 TCFL5Q9UL49 500 aa18.25■□□□□ 0.51
TMEM88B-201ENST00000378821 PCDHGA9Q9Y5G4 932 aaKnown RBP18.25■□□□□ 0.51
TMEM88B-201ENST00000378821 E7EQ34 232 aa18.24■□□□□ 0.51
TMEM88B-201ENST00000378821 ZNF749O43361 778 aa18.24■□□□□ 0.51
TMEM88B-201ENST00000378821 KDM1AO60341 852 aa18.24■□□□□ 0.51
TMEM88B-201ENST00000378821 CEACAM4O75871 244 aa18.24■□□□□ 0.51
TMEM88B-201ENST00000378821 CYP2A7P20853 494 aa18.24■□□□□ 0.51
TMEM88B-201ENST00000378821 RPS3P23396 243 aaKnown RBP eCLIP18.24■□□□□ 0.51
TMEM88B-201ENST00000378821 AOAHP28039 575 aa18.24■□□□□ 0.51
TMEM88B-201ENST00000378821 EIF3BP55884 814 aaKnown RBP18.24■□□□□ 0.51
TMEM88B-201ENST00000378821 CRYMQ14894 314 aa18.24■□□□□ 0.51
TMEM88B-201ENST00000378821 KIR2DS3Q14952 304 aa18.24■□□□□ 0.51
TMEM88B-201ENST00000378821 HIF1AQ16665 826 aa18.24■□□□□ 0.51
TMEM88B-201ENST00000378821 LONRF1Q17RB8 773 aa18.24■□□□□ 0.51
TMEM88B-201ENST00000378821 SLC5A12Q1EHB4 618 aa18.24■□□□□ 0.51
TMEM88B-201ENST00000378821 SYTL3Q4VX76 610 aa18.24■□□□□ 0.51
TMEM88B-201ENST00000378821 CTSL3PQ5NE16 218 aa18.24■□□□□ 0.51
TMEM88B-201ENST00000378821 RNF187Q5TA31 235 aaPredicted RBP18.24■□□□□ 0.51
TMEM88B-201ENST00000378821 ZNF470Q6ECI4 717 aa18.24■□□□□ 0.51
TMEM88B-201ENST00000378821 CENPUQ71F23 418 aa18.24■□□□□ 0.51
TMEM88B-201ENST00000378821 MAATS1Q7Z4T9 603 aa18.24■□□□□ 0.51
TMEM88B-201ENST00000378821 SDCCAG8Q86SQ7 713 aaPredicted RBP18.24■□□□□ 0.51
TMEM88B-201ENST00000378821 VRK3Q8IV63 474 aa18.24■□□□□ 0.51
TMEM88B-201ENST00000378821 PDIK1LQ8N165 341 aa18.24■□□□□ 0.51
TMEM88B-201ENST00000378821 ENDOVQ8N8Q3 282 aaKnown RBP18.24■□□□□ 0.51
TMEM88B-201ENST00000378821 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.24■□□□□ 0.51
TMEM88B-201ENST00000378821 CLIP3Q96DZ5 547 aa18.24■□□□□ 0.51
TMEM88B-201ENST00000378821 EBNA1BP2Q99848 306 aaKnown RBP18.24■□□□□ 0.51
TMEM88B-201ENST00000378821 ERP44Q9BS26 406 aa18.24■□□□□ 0.51
TMEM88B-201ENST00000378821 KLHL25Q9H0H3 589 aa18.24■□□□□ 0.51
TMEM88B-201ENST00000378821 ENAMQ9NRM1 1142 aa18.24■□□□□ 0.51
TMEM88B-201ENST00000378821 GNPTGQ9UJJ9 305 aa18.24■□□□□ 0.51
TMEM88B-201ENST00000378821 AP1M2Q9Y6Q5 423 aa18.24■□□□□ 0.51
TMEM88B-201ENST00000378821 FAM169AQ9Y6X4 670 aa18.24■□□□□ 0.51
TMEM88B-201ENST00000378821 FLNCQ14315 2725 aa18.24■□□□□ 0.51
TMEM88B-201ENST00000378821 FER1L5A0AVI2 2057 aa18.24■□□□□ 0.51
TMEM88B-201ENST00000378821 MED13Q9UHV7 2174 aa18.24■□□□□ 0.51
TMEM88B-201ENST00000378821 A0A0J9YY10 115 aa18.23■□□□□ 0.51
TMEM88B-201ENST00000378821 HCRTR1O43613 425 aa18.23■□□□□ 0.51
TMEM88B-201ENST00000378821 PDGFAP04085 211 aa18.23■□□□□ 0.51
TMEM88B-201ENST00000378821 NR1D1P20393 614 aa18.23■□□□□ 0.51
TMEM88B-201ENST00000378821 PEBP1P30086 187 aaKnown RBP18.23■□□□□ 0.51
TMEM88B-201ENST00000378821 PKLRP30613 574 aa18.23■□□□□ 0.51
TMEM88B-201ENST00000378821 CSE1LP55060 971 aaKnown RBP18.23■□□□□ 0.51
TMEM88B-201ENST00000378821 THOC5Q13769 683 aaKnown RBP18.23■□□□□ 0.51
TMEM88B-201ENST00000378821 GRB7Q14451 532 aa18.23■□□□□ 0.51
TMEM88B-201ENST00000378821 WHAMMP3Q1A5X7 153 aa18.23■□□□□ 0.51
TMEM88B-201ENST00000378821 HP1BP3Q5SSJ5 553 aaPredicted RBP18.23■□□□□ 0.51
TMEM88B-201ENST00000378821 PTRHD1Q6GMV3 140 aaKnown RBP18.23■□□□□ 0.51
TMEM88B-201ENST00000378821 UNC5DQ6UXZ4 953 aa18.23■□□□□ 0.51
TMEM88B-201ENST00000378821 ASB18Q6ZVZ8 466 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms