RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 DSELQ8IZU8 1212 aa16.23■□□□□ 0.19
HMGN4-201ENST00000377575 AGGF1Q8N302 714 aaeCLIP16.23■□□□□ 0.19
HMGN4-201ENST00000377575 LINC01555Q8NAE3 123 aa16.23■□□□□ 0.19
HMGN4-201ENST00000377575 FAM136AQ96C01 138 aa16.23■□□□□ 0.19
HMGN4-201ENST00000377575 NAT9Q9BTE0 207 aa16.23■□□□□ 0.19
HMGN4-201ENST00000377575 ACTL8Q9H568 366 aa16.23■□□□□ 0.19
HMGN4-201ENST00000377575 INTS7Q9NVH2 962 aaKnown RBP16.23■□□□□ 0.19
HMGN4-201ENST00000377575 GEMIN8Q9NWZ8 242 aaKnown RBP16.23■□□□□ 0.19
HMGN4-201ENST00000377575 CIDEBQ9UHD4 219 aa16.23■□□□□ 0.19
HMGN4-201ENST00000377575 TUBD1Q9UJT1 453 aa16.23■□□□□ 0.19
HMGN4-201ENST00000377575 NFS1Q9Y697 457 aa16.23■□□□□ 0.19
HMGN4-201ENST00000377575 COMMD10Q9Y6G5 202 aa16.23■□□□□ 0.19
HMGN4-201ENST00000377575 SMAPO00193 183 aa16.22■□□□□ 0.19
HMGN4-201ENST00000377575 FKBP9O95302 570 aa16.22■□□□□ 0.19
HMGN4-201ENST00000377575 RECKO95980 971 aa16.22■□□□□ 0.19
HMGN4-201ENST00000377575 PTPN4P29074 926 aa16.22■□□□□ 0.19
HMGN4-201ENST00000377575 PTGIRP43119 386 aa16.22■□□□□ 0.19
HMGN4-201ENST00000377575 KCNAB2Q13303 367 aa16.22■□□□□ 0.19
HMGN4-201ENST00000377575 CTBP1Q13363 440 aa16.22■□□□□ 0.19
HMGN4-201ENST00000377575 ERV3-1Q14264 604 aa16.22■□□□□ 0.19
HMGN4-201ENST00000377575 GRB7Q14451 532 aa16.22■□□□□ 0.19
HMGN4-201ENST00000377575 CRYMQ14894 314 aa16.22■□□□□ 0.19
HMGN4-201ENST00000377575 MORF4L2Q15014 288 aa16.22■□□□□ 0.19
HMGN4-201ENST00000377575 DEFB110Q30KQ9 67 aa16.22■□□□□ 0.19
HMGN4-201ENST00000377575 DEFB109BQ30KR1 87 aa16.22■□□□□ 0.19
HMGN4-201ENST00000377575 ZNF517Q6ZMY9 492 aaPredicted RBP16.22■□□□□ 0.19
HMGN4-201ENST00000377575 ZNF605Q86T29 641 aa16.22■□□□□ 0.19
HMGN4-201ENST00000377575 TAX1BP1Q86VP1 789 aa16.22■□□□□ 0.19
HMGN4-201ENST00000377575 KCNMB4Q86W47 210 aa16.22■□□□□ 0.19
HMGN4-201ENST00000377575 APOBEC4Q8WW27 367 aaKnown RBP16.22■□□□□ 0.19
HMGN4-201ENST00000377575 KCNJ9Q92806 393 aa16.22■□□□□ 0.19
HMGN4-201ENST00000377575 IL17FQ96PD4 163 aa16.22■□□□□ 0.19
HMGN4-201ENST00000377575 DPH2Q9BQC3 489 aaPredicted RBP16.22■□□□□ 0.19
HMGN4-201ENST00000377575 FBXO6Q9NRD1 293 aaPredicted RBP16.22■□□□□ 0.19
HMGN4-201ENST00000377575 SPATA7Q9P0W8 599 aa16.22■□□□□ 0.19
HMGN4-201ENST00000377575 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.22■□□□□ 0.19
HMGN4-201ENST00000377575 RNF14Q9UBS8 474 aa16.22■□□□□ 0.19
HMGN4-201ENST00000377575 TSR3Q9UJK0 312 aaKnown RBP16.22■□□□□ 0.19
HMGN4-201ENST00000377575 RUVBL2Q9Y230 463 aaKnown RBP16.22■□□□□ 0.19
HMGN4-201ENST00000377575 POLHQ9Y253 713 aa16.22■□□□□ 0.19
HMGN4-201ENST00000377575 AP1M2Q9Y6Q5 423 aa16.22■□□□□ 0.19
HMGN4-201ENST00000377575 FAM169AQ9Y6X4 670 aa16.22■□□□□ 0.19
HMGN4-201ENST00000377575 CDC14CA4D256 554 aa16.21■□□□□ 0.19
HMGN4-201ENST00000377575 MEN1O00255 615 aa16.21■□□□□ 0.19
HMGN4-201ENST00000377575 ZNF749O43361 778 aa16.21■□□□□ 0.19
HMGN4-201ENST00000377575 OR2B3O76000 313 aa16.21■□□□□ 0.19
HMGN4-201ENST00000377575 MATN4O95460 622 aa16.21■□□□□ 0.19
HMGN4-201ENST00000377575 MAGP20916 626 aa16.21■□□□□ 0.19
HMGN4-201ENST00000377575 RORAP35398 523 aa16.21■□□□□ 0.19
HMGN4-201ENST00000377575 DHX9Q08211 1270 aaKnown RBP16.21■□□□□ 0.19
HMGN4-201ENST00000377575 ZIC1Q15915 447 aa16.21■□□□□ 0.19
HMGN4-201ENST00000377575 SPANXN3Q5MJ09 141 aa16.21■□□□□ 0.19
HMGN4-201ENST00000377575 ATP1A1-AS1Q5TC04 95 aa16.21■□□□□ 0.19
HMGN4-201ENST00000377575 PRAMEF17Q5VTA0 474 aa16.21■□□□□ 0.19
HMGN4-201ENST00000377575 FAM199XQ6PEV8 388 aaPredicted RBP16.21■□□□□ 0.19
HMGN4-201ENST00000377575 NEK10Q6ZWH5 1172 aa16.21■□□□□ 0.19
HMGN4-201ENST00000377575 SYVN1Q86TM6 617 aa16.21■□□□□ 0.19
HMGN4-201ENST00000377575 SYTL1Q8IYJ3 562 aa16.21■□□□□ 0.19
HMGN4-201ENST00000377575 SLC38A9Q8NBW4 561 aa16.21■□□□□ 0.19
HMGN4-201ENST00000377575 EBNA1BP2Q99848 306 aaKnown RBP16.21■□□□□ 0.19
HMGN4-201ENST00000377575 FAM60AQ9NP50 221 aa16.21■□□□□ 0.19
HMGN4-201ENST00000377575 FAM114A2Q9NRY5 505 aa16.21■□□□□ 0.19
HMGN4-201ENST00000377575 PCMTD2Q9NV79 361 aa16.21■□□□□ 0.19
HMGN4-201ENST00000377575 IRAK4Q9NWZ3 460 aa16.21■□□□□ 0.19
HMGN4-201ENST00000377575 KLHL42Q9P2K6 505 aa16.21■□□□□ 0.19
HMGN4-201ENST00000377575 FBXO5Q9UKT4 447 aa16.21■□□□□ 0.19
HMGN4-201ENST00000377575 BSNQ9UPA5 3926 aa16.21■□□□□ 0.19
HMGN4-201ENST00000377575 TLN1Q9Y490 2541 aaKnown RBP16.21■□□□□ 0.19
HMGN4-201ENST00000377575 PCM1Q15154 2024 aa16.21■□□□□ 0.18
HMGN4-201ENST00000377575 BAHCC1Q9P281 2608 aa16.2■□□□□ 0.18
HMGN4-201ENST00000377575 FER1L5A0AVI2 2057 aa16.2■□□□□ 0.18
HMGN4-201ENST00000377575 B8ZZF3 427 aa16.2■□□□□ 0.18
HMGN4-201ENST00000377575 C9J4A7 227 aa16.2■□□□□ 0.18
HMGN4-201ENST00000377575 ZSCAN9O15535 394 aaPredicted RBP16.2■□□□□ 0.18
HMGN4-201ENST00000377575 CATP04040 527 aaKnown RBP16.2■□□□□ 0.18
HMGN4-201ENST00000377575 RAB40ALP0C0E4 278 aa16.2■□□□□ 0.18
HMGN4-201ENST00000377575 AGXTP21549 392 aa16.2■□□□□ 0.18
HMGN4-201ENST00000377575 CLCN7P51798 805 aa16.2■□□□□ 0.18
HMGN4-201ENST00000377575 NFATC3Q12968 1075 aa16.2■□□□□ 0.18
HMGN4-201ENST00000377575 SF1Q15637 639 aaKnown RBP16.2■□□□□ 0.18
HMGN4-201ENST00000377575 KLHL38Q2WGJ6 581 aa16.2■□□□□ 0.18
HMGN4-201ENST00000377575 BBS9Q3SYG4 887 aa16.2■□□□□ 0.18
HMGN4-201ENST00000377575 HSP90AA5PQ58FG0 334 aa16.2■□□□□ 0.18
HMGN4-201ENST00000377575 ACSBG2Q5FVE4 666 aa16.2■□□□□ 0.18
HMGN4-201ENST00000377575 TLDC1Q6P9B6 456 aa16.2■□□□□ 0.18
HMGN4-201ENST00000377575 PDIK1LQ8N165 341 aa16.2■□□□□ 0.18
HMGN4-201ENST00000377575 C2orf73Q8N5S3 287 aaPredicted RBP16.2■□□□□ 0.18
HMGN4-201ENST00000377575 HMGCLL1Q8TB92 370 aa16.2■□□□□ 0.18
HMGN4-201ENST00000377575 C17orf62Q9BQA9 187 aa16.2■□□□□ 0.18
HMGN4-201ENST00000377575 SLC25A18Q9H1K4 315 aa16.2■□□□□ 0.18
HMGN4-201ENST00000377575 CHST8Q9H2A9 424 aa16.2■□□□□ 0.18
HMGN4-201ENST00000377575 AKIRIN1Q9H9L7 192 aaPredicted RBP16.2■□□□□ 0.18
HMGN4-201ENST00000377575 IARS2Q9NSE4 1012 aaKnown RBP16.2■□□□□ 0.18
HMGN4-201ENST00000377575 STARD5Q9NSY2 213 aa16.2■□□□□ 0.18
HMGN4-201ENST00000377575 SRPK3Q9UPE1 567 aa16.2■□□□□ 0.18
HMGN4-201ENST00000377575 PLCL2Q9UPR0 1127 aa16.2■□□□□ 0.18
HMGN4-201ENST00000377575 FARSAQ9Y285 508 aaKnown RBP16.2■□□□□ 0.18
HMGN4-201ENST00000377575 HEMK1Q9Y5R4 338 aaPredicted RBP16.2■□□□□ 0.18
HMGN4-201ENST00000377575 ZNF462Q96JM2 2506 aa16.2■□□□□ 0.18
HMGN4-201ENST00000377575 NDC80O14777 642 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms