RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 SPHK1Q9NYA1 384 aa18.48■□□□□ 0.55
CBWD3-204ENST00000377349 HEATR5BQ9P2D3 2071 aa18.47■□□□□ 0.55
CBWD3-204ENST00000377349 F8W8V4 182 aa18.47■□□□□ 0.55
CBWD3-204ENST00000377349 PSMA3P25788 255 aa18.47■□□□□ 0.55
CBWD3-204ENST00000377349 OTX2P32243 289 aa18.47■□□□□ 0.55
CBWD3-204ENST00000377349 PPARGP37231 505 aaPredicted RBP18.47■□□□□ 0.55
CBWD3-204ENST00000377349 FOXL2P58012 376 aa18.47■□□□□ 0.55
CBWD3-204ENST00000377349 HSPA14Q0VDF9 509 aa18.47■□□□□ 0.55
CBWD3-204ENST00000377349 SEMA3AQ14563 771 aa18.47■□□□□ 0.55
CBWD3-204ENST00000377349 PLEKHN1Q494U1 663 aaPredicted RBP18.47■□□□□ 0.55
CBWD3-204ENST00000377349 RHBDD2Q6NTF9 364 aa18.47■□□□□ 0.55
CBWD3-204ENST00000377349 UNC5AQ6ZN44 842 aa18.47■□□□□ 0.55
CBWD3-204ENST00000377349 NLRP9Q7RTR0 991 aa18.47■□□□□ 0.55
CBWD3-204ENST00000377349 RAB43Q86YS6 212 aa18.47■□□□□ 0.55
CBWD3-204ENST00000377349 MAIP1Q8WWC4 291 aa18.47■□□□□ 0.55
CBWD3-204ENST00000377349 TSSK1BQ9BXA7 367 aa18.47■□□□□ 0.55
CBWD3-204ENST00000377349 SPRTNQ9H040 489 aaPredicted RBP18.47■□□□□ 0.55
CBWD3-204ENST00000377349 C5AR2Q9P296 337 aa18.47■□□□□ 0.55
CBWD3-204ENST00000377349 TSR3Q9UJK0 312 aaKnown RBP18.47■□□□□ 0.55
CBWD3-204ENST00000377349 PADI2Q9Y2J8 665 aa18.47■□□□□ 0.55
CBWD3-204ENST00000377349 ABCA12Q86UK0 2595 aa18.46■□□□□ 0.55
CBWD3-204ENST00000377349 IQCF5A8MTL0 148 aa18.46■□□□□ 0.55
CBWD3-204ENST00000377349 C9J4A7 227 aa18.46■□□□□ 0.55
CBWD3-204ENST00000377349 HBQ1P09105 142 aa18.46■□□□□ 0.55
CBWD3-204ENST00000377349 CCZ1BP86790 482 aa18.46■□□□□ 0.55
CBWD3-204ENST00000377349 CCZ1P86791 482 aaPredicted RBP18.46■□□□□ 0.55
CBWD3-204ENST00000377349 AARS2Q5JTZ9 985 aaKnown RBP18.46■□□□□ 0.55
CBWD3-204ENST00000377349 VWA5B1Q5TIE3 1220 aa18.46■□□□□ 0.55
CBWD3-204ENST00000377349 ZNF534Q76KX8 674 aa18.46■□□□□ 0.55
CBWD3-204ENST00000377349 KRT222Q8N1A0 295 aa18.46■□□□□ 0.55
CBWD3-204ENST00000377349 SKA2Q8WVK7 121 aaPredicted RBP18.46■□□□□ 0.55
CBWD3-204ENST00000377349 SNRNP40Q96DI7 357 aaKnown RBP18.46■□□□□ 0.55
CBWD3-204ENST00000377349 PPP2R2CQ9Y2T4 447 aa18.46■□□□□ 0.55
CBWD3-204ENST00000377349 CSMD1Q96PZ7 3565 aa18.46■□□□□ 0.55
CBWD3-204ENST00000377349 CROCCQ5TZA2 2017 aa18.45■□□□□ 0.54
CBWD3-204ENST00000377349 A1L4Q6 167 aa18.45■□□□□ 0.54
CBWD3-204ENST00000377349 WIPF3A6NGB9 483 aa18.45■□□□□ 0.54
CBWD3-204ENST00000377349 BHMG1C9JSJ3 638 aaPredicted RBP18.45■□□□□ 0.54
CBWD3-204ENST00000377349 MASP2O00187 686 aa18.45■□□□□ 0.54
CBWD3-204ENST00000377349 OR2B3O76000 313 aa18.45■□□□□ 0.54
CBWD3-204ENST00000377349 CHRM5P08912 532 aaPredicted RBP18.45■□□□□ 0.54
CBWD3-204ENST00000377349 AGXTP21549 392 aa18.45■□□□□ 0.54
CBWD3-204ENST00000377349 MGAT1P26572 445 aa18.45■□□□□ 0.54
CBWD3-204ENST00000377349 PEBP1P30086 187 aaKnown RBP18.45■□□□□ 0.54
CBWD3-204ENST00000377349 SHMT2P34897 504 aa18.45■□□□□ 0.54
CBWD3-204ENST00000377349 SSPNQ14714 243 aa18.45■□□□□ 0.54
CBWD3-204ENST00000377349 CRB2Q5IJ48 1285 aa18.45■□□□□ 0.54
CBWD3-204ENST00000377349 PCID2Q5JVF3 399 aa18.45■□□□□ 0.54
CBWD3-204ENST00000377349 DCAF10Q5QP82 559 aa18.45■□□□□ 0.54
CBWD3-204ENST00000377349 C1orf189Q5VU69 101 aa18.45■□□□□ 0.54
CBWD3-204ENST00000377349 PTRHD1Q6GMV3 140 aaKnown RBP18.45■□□□□ 0.54
CBWD3-204ENST00000377349 CES3Q6UWW8 571 aa18.45■□□□□ 0.54
CBWD3-204ENST00000377349 TAX1BP1Q86VP1 789 aa18.45■□□□□ 0.54
CBWD3-204ENST00000377349 GPR135Q8IZ08 494 aa18.45■□□□□ 0.54
CBWD3-204ENST00000377349 GSDMBQ8TAX9 411 aa18.45■□□□□ 0.54
CBWD3-204ENST00000377349 LKAAEAR1Q8TD35 194 aa18.45■□□□□ 0.54
CBWD3-204ENST00000377349 UBE2Q2Q8WVN8 375 aa18.45■□□□□ 0.54
CBWD3-204ENST00000377349 INPP5DQ92835 1189 aa18.45■□□□□ 0.54
CBWD3-204ENST00000377349 TCTN2Q96GX1 697 aa18.45■□□□□ 0.54
CBWD3-204ENST00000377349 SGSM3Q96HU1 749 aa18.45■□□□□ 0.54
CBWD3-204ENST00000377349 BFARQ9NZS9 450 aa18.45■□□□□ 0.54
CBWD3-204ENST00000377349 MARCH4Q9P2E8 410 aaPredicted RBP18.45■□□□□ 0.54
CBWD3-204ENST00000377349 G3BP2Q9UN86 482 aaKnown RBP18.45■□□□□ 0.54
CBWD3-204ENST00000377349 CDYLQ9Y232 598 aa18.45■□□□□ 0.54
CBWD3-204ENST00000377349 AP1M2Q9Y6Q5 423 aa18.45■□□□□ 0.54
CBWD3-204ENST00000377349 SLC5A10A0PJK1 596 aa18.44■□□□□ 0.54
CBWD3-204ENST00000377349 ISM1B1AKI9 464 aa18.44■□□□□ 0.54
CBWD3-204ENST00000377349 CD3EAPO15446 510 aaKnown RBP18.44■□□□□ 0.54
CBWD3-204ENST00000377349 UMODP07911 640 aa18.44■□□□□ 0.54
CBWD3-204ENST00000377349 GCGRP47871 477 aa18.44■□□□□ 0.54
CBWD3-204ENST00000377349 TMED2Q15363 201 aa18.44■□□□□ 0.54
CBWD3-204ENST00000377349 MLIPQ5VWP3 458 aa18.44■□□□□ 0.54
CBWD3-204ENST00000377349 MRPL14Q6P1L8 145 aaKnown RBP18.44■□□□□ 0.54
CBWD3-204ENST00000377349 TBC1D21Q8IYX1 336 aa18.44■□□□□ 0.54
CBWD3-204ENST00000377349 DNAJC22Q8N4W6 341 aa18.44■□□□□ 0.54
CBWD3-204ENST00000377349 C2orf73Q8N5S3 287 aaPredicted RBP18.44■□□□□ 0.54
CBWD3-204ENST00000377349 PROKR1Q8TCW9 393 aa18.44■□□□□ 0.54
CBWD3-204ENST00000377349 ZNF552Q9H707 407 aaPredicted RBP18.44■□□□□ 0.54
CBWD3-204ENST00000377349 SLC22A11Q9NSA0 550 aa18.44■□□□□ 0.54
CBWD3-204ENST00000377349 ASF1BQ9NVP2 202 aa18.44■□□□□ 0.54
CBWD3-204ENST00000377349 SYBUQ9NX95 663 aa18.44■□□□□ 0.54
CBWD3-204ENST00000377349 DHCR7Q9UBM7 475 aaKnown RBP18.44■□□□□ 0.54
CBWD3-204ENST00000377349 POLG2Q9UHN1 485 aa18.44■□□□□ 0.54
CBWD3-204ENST00000377349 ERRFI1Q9UJM3 462 aaPredicted RBP18.44■□□□□ 0.54
CBWD3-204ENST00000377349 ZKSCAN5Q9Y2L8 839 aa18.44■□□□□ 0.54
CBWD3-204ENST00000377349 PTRH2Q9Y3E5 179 aaKnown RBP18.44■□□□□ 0.54
CBWD3-204ENST00000377349 A0A0J9YY10 115 aa18.43■□□□□ 0.54
CBWD3-204ENST00000377349 KDM1AO60341 852 aa18.43■□□□□ 0.54
CBWD3-204ENST00000377349 CBX6O95503 412 aa18.43■□□□□ 0.54
CBWD3-204ENST00000377349 APOA4P06727 396 aa18.43■□□□□ 0.54
CBWD3-204ENST00000377349 NMBRP28336 390 aa18.43■□□□□ 0.54
CBWD3-204ENST00000377349 CCR7P32248 378 aa18.43■□□□□ 0.54
CBWD3-204ENST00000377349 EIF3BP55884 814 aaKnown RBP18.43■□□□□ 0.54
CBWD3-204ENST00000377349 PLOD1Q02809 727 aaPredicted RBP18.43■□□□□ 0.54
CBWD3-204ENST00000377349 MYBPC3Q14896 1274 aa18.43■□□□□ 0.54
CBWD3-204ENST00000377349 SLC9A5Q14940 896 aa18.43■□□□□ 0.54
CBWD3-204ENST00000377349 CASC4Q6P4E1 433 aa18.43■□□□□ 0.54
CBWD3-204ENST00000377349 IGFL3Q6UXB1 125 aa18.43■□□□□ 0.54
CBWD3-204ENST00000377349 PPP1R32Q7Z5V6 425 aa18.43■□□□□ 0.54
CBWD3-204ENST00000377349 VRK3Q8IV63 474 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms