RNA–Protein interactions for RNA: ENST00000377078.2

USP11-202, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 1,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-202ENST00000377078 ZNF669Q96BR6 464 aaPredicted RBP16.54■□□□□ 0.24
USP11-202ENST00000377078 DHRS4Q9BTZ2 278 aa16.54■□□□□ 0.24
USP11-202ENST00000377078 CCDC68Q9H2F9 335 aa16.54■□□□□ 0.24
USP11-202ENST00000377078 FAM60AQ9NP50 221 aa16.54■□□□□ 0.24
USP11-202ENST00000377078 INTS10Q9NVR2 710 aaKnown RBP16.54■□□□□ 0.24
USP11-202ENST00000377078 GPN3Q9UHW5 284 aaPredicted RBP16.54■□□□□ 0.24
USP11-202ENST00000377078 TCFL5Q9UL49 500 aa16.54■□□□□ 0.24
USP11-202ENST00000377078 PLCL2Q9UPR0 1127 aa16.54■□□□□ 0.24
USP11-202ENST00000377078 CRYL1Q9Y2S2 319 aa16.54■□□□□ 0.24
USP11-202ENST00000377078 CTAGE9A4FU28 777 aa16.53■□□□□ 0.24
USP11-202ENST00000377078 GOLGA8MH3BSY2 632 aa16.53■□□□□ 0.24
USP11-202ENST00000377078 WISP1O95388 367 aa16.53■□□□□ 0.24
USP11-202ENST00000377078 CHRM3P20309 590 aa16.53■□□□□ 0.24
USP11-202ENST00000377078 ATP5DP30049 168 aa16.53■□□□□ 0.24
USP11-202ENST00000377078 CSRP3P50461 194 aa16.53■□□□□ 0.24
USP11-202ENST00000377078 NCF4Q15080 339 aa16.53■□□□□ 0.24
USP11-202ENST00000377078 PPP1R7Q15435 360 aa16.53■□□□□ 0.24
USP11-202ENST00000377078 ZIC1Q15915 447 aa16.53■□□□□ 0.24
USP11-202ENST00000377078 PTCHD3Q3KNS1 767 aa16.53■□□□□ 0.24
USP11-202ENST00000377078 ANKRD20A4Q4UJ75 823 aa16.53■□□□□ 0.24
USP11-202ENST00000377078 CTSL3PQ5NE16 218 aa16.53■□□□□ 0.24
USP11-202ENST00000377078 ANKRD22Q5VYY1 191 aa16.53■□□□□ 0.24
USP11-202ENST00000377078 TCTN3Q6NUS6 607 aa16.53■□□□□ 0.24
USP11-202ENST00000377078 CAND1Q86VP6 1230 aaKnown RBP16.53■□□□□ 0.24
USP11-202ENST00000377078 CILP2Q8IUL8 1156 aa16.53■□□□□ 0.24
USP11-202ENST00000377078 FLVCR1-AS1Q8TAF5 88 aa16.53■□□□□ 0.24
USP11-202ENST00000377078 DLG3Q92796 817 aa16.53■□□□□ 0.24
USP11-202ENST00000377078 SERPINB12Q96P63 405 aa16.53■□□□□ 0.24
USP11-202ENST00000377078 RUFY1Q96T51 708 aa16.53■□□□□ 0.24
USP11-202ENST00000377078 NDC1Q9BTX1 674 aa16.53■□□□□ 0.24
USP11-202ENST00000377078 ACSS2Q9NR19 701 aa16.53■□□□□ 0.24
USP11-202ENST00000377078 SNX12Q9UMY4 172 aa16.53■□□□□ 0.24
USP11-202ENST00000377078 MAD1L1Q9Y6D9 718 aa16.53■□□□□ 0.24
USP11-202ENST00000377078 TMEM63AO94886 807 aa16.52■□□□□ 0.24
USP11-202ENST00000377078 C1orf105O95561 183 aa16.52■□□□□ 0.24
USP11-202ENST00000377078 PKMP14618 531 aaKnown RBP16.52■□□□□ 0.24
USP11-202ENST00000377078 MAGP20916 626 aa16.52■□□□□ 0.24
USP11-202ENST00000377078 PEBP1P30086 187 aaKnown RBP16.52■□□□□ 0.24
USP11-202ENST00000377078 DCDP81605 110 aaKnown RBP16.52■□□□□ 0.24
USP11-202ENST00000377078 IL10RAQ13651 578 aa16.52■□□□□ 0.24
USP11-202ENST00000377078 NAA25Q14CX7 972 aa16.52■□□□□ 0.24
USP11-202ENST00000377078 TTLL9Q3SXZ7 439 aa16.52■□□□□ 0.24
USP11-202ENST00000377078 ZC3H12BQ5HYM0 836 aaKnown RBP16.52■□□□□ 0.24
USP11-202ENST00000377078 ZNF470Q6ECI4 717 aa16.52■□□□□ 0.24
USP11-202ENST00000377078 RHBDD2Q6NTF9 364 aa16.52■□□□□ 0.24
USP11-202ENST00000377078 CNSTQ6PJW8 725 aa16.52■□□□□ 0.24
USP11-202ENST00000377078 FAM198BQ6UWH4 519 aa16.52■□□□□ 0.24
USP11-202ENST00000377078 TMEM135Q86UB9 458 aa16.52■□□□□ 0.24
USP11-202ENST00000377078 TAX1BP1Q86VP1 789 aa16.52■□□□□ 0.24
USP11-202ENST00000377078 RAB43Q86YS6 212 aa16.52■□□□□ 0.24
USP11-202ENST00000377078 REXO1L1PQ8IX06 675 aa16.52■□□□□ 0.24
USP11-202ENST00000377078 LMNTD2Q8IXW0 634 aa16.52■□□□□ 0.24
USP11-202ENST00000377078 PPIL6Q8IXY8 311 aa16.52■□□□□ 0.24
USP11-202ENST00000377078 C2orf73Q8N5S3 287 aaPredicted RBP16.52■□□□□ 0.24
USP11-202ENST00000377078 ZBTB2Q8N680 514 aa16.52■□□□□ 0.24
USP11-202ENST00000377078 TEX19Q8NA77 164 aa16.52■□□□□ 0.24
USP11-202ENST00000377078 LINC01555Q8NAE3 123 aa16.52■□□□□ 0.24
USP11-202ENST00000377078 GABPB2Q8TAK5 448 aaPredicted RBP16.52■□□□□ 0.24
USP11-202ENST00000377078 CALML6Q8TD86 181 aa16.52■□□□□ 0.24
USP11-202ENST00000377078 COG1Q8WTW3 980 aa16.52■□□□□ 0.24
USP11-202ENST00000377078 BIRC8Q96P09 236 aa16.52■□□□□ 0.24
USP11-202ENST00000377078 IL17FQ96PD4 163 aa16.52■□□□□ 0.24
USP11-202ENST00000377078 MENTQ9BUN1 341 aa16.52■□□□□ 0.24
USP11-202ENST00000377078 TRIM4Q9C037 500 aa16.52■□□□□ 0.24
USP11-202ENST00000377078 CLMPQ9H6B4 373 aa16.52■□□□□ 0.24
USP11-202ENST00000377078 FAM114A2Q9NRY5 505 aa16.52■□□□□ 0.24
USP11-202ENST00000377078 TRMT1Q9NXH9 659 aaKnown RBP16.52■□□□□ 0.24
USP11-202ENST00000377078 NDOR1Q9UHB4 597 aa16.52■□□□□ 0.24
USP11-202ENST00000377078 CIDEBQ9UHD4 219 aa16.52■□□□□ 0.24
USP11-202ENST00000377078 TP53TG5Q9Y2B4 290 aa16.52■□□□□ 0.24
USP11-202ENST00000377078 SPTBP11277 2137 aa16.51■□□□□ 0.23
USP11-202ENST00000377078 NIPSNAP2O75323 286 aa16.51■□□□□ 0.23
USP11-202ENST00000377078 TCP1P17987 556 aaKnown RBP16.51■□□□□ 0.23
USP11-202ENST00000377078 ARSFP54793 590 aa16.51■□□□□ 0.23
USP11-202ENST00000377078 RRADP55042 308 aa16.51■□□□□ 0.23
USP11-202ENST00000377078 KLRB1Q12918 225 aa16.51■□□□□ 0.23
USP11-202ENST00000377078 GRB7Q14451 532 aa16.51■□□□□ 0.23
USP11-202ENST00000377078 DNAJC22Q8N4W6 341 aa16.51■□□□□ 0.23
USP11-202ENST00000377078 ZNF655Q8N720 491 aaPredicted RBP16.51■□□□□ 0.23
USP11-202ENST00000377078 IP6K3Q96PC2 410 aa16.51■□□□□ 0.23
USP11-202ENST00000377078 SPRTNQ9H040 489 aaPredicted RBP16.51■□□□□ 0.23
USP11-202ENST00000377078 EURLQ9NYK6 297 aa16.51■□□□□ 0.23
USP11-202ENST00000377078 SPATA7Q9P0W8 599 aa16.51■□□□□ 0.23
USP11-202ENST00000377078 IFT80Q9P2H3 777 aaPredicted RBP16.51■□□□□ 0.23
USP11-202ENST00000377078 TLK1Q9UKI8 766 aa16.51■□□□□ 0.23
USP11-202ENST00000377078 TENM4Q6N022 2769 aa16.5■□□□□ 0.23
USP11-202ENST00000377078 ARGFXA6NJG6 315 aa16.5■□□□□ 0.23
USP11-202ENST00000377078 USP1O94782 785 aa16.5■□□□□ 0.23
USP11-202ENST00000377078 CATP04040 527 aaKnown RBP16.5■□□□□ 0.23
USP11-202ENST00000377078 CASRP41180 1078 aa16.5■□□□□ 0.23
USP11-202ENST00000377078 BDKRB1P46663 353 aa16.5■□□□□ 0.23
USP11-202ENST00000377078 GABRA4P48169 554 aa16.5■□□□□ 0.23
USP11-202ENST00000377078 PGDP52209 483 aa16.5■□□□□ 0.23
USP11-202ENST00000377078 TLE1Q04724 770 aa16.5■□□□□ 0.23
USP11-202ENST00000377078 LONRF1Q17RB8 773 aa16.5■□□□□ 0.23
USP11-202ENST00000377078 KCTD19Q17RG1 926 aaPredicted RBP16.5■□□□□ 0.23
USP11-202ENST00000377078 TCTE1Q5JU00 501 aa16.5■□□□□ 0.23
USP11-202ENST00000377078 C1orf189Q5VU69 101 aa16.5■□□□□ 0.23
USP11-202ENST00000377078 YOD1Q5VVQ6 348 aaPredicted RBP16.5■□□□□ 0.23
USP11-202ENST00000377078 MLIPQ5VWP3 458 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms