RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 GSDMBQ8TAX9 411 aa20.26■□□□□ 0.83
VSX1-201ENST00000376707 SLC22A18Q96BI1 424 aa20.26■□□□□ 0.83
VSX1-201ENST00000376707 MARCH4Q9P2E8 410 aaPredicted RBP20.26■□□□□ 0.83
VSX1-201ENST00000376707 CIDEBQ9UHD4 219 aa20.26■□□□□ 0.83
VSX1-201ENST00000376707 PEX12O00623 359 aa20.25■□□□□ 0.83
VSX1-201ENST00000376707 CD3EAPO15446 510 aaKnown RBP20.25■□□□□ 0.83
VSX1-201ENST00000376707 MAGP20916 626 aa20.25■□□□□ 0.83
VSX1-201ENST00000376707 CD9P21926 228 aa20.25■□□□□ 0.83
VSX1-201ENST00000376707 AOAHP28039 575 aa20.25■□□□□ 0.83
VSX1-201ENST00000376707 SLC9A5Q14940 896 aa20.25■□□□□ 0.83
VSX1-201ENST00000376707 C2orf73Q8N5S3 287 aaPredicted RBP20.25■□□□□ 0.83
VSX1-201ENST00000376707 LINC01555Q8NAE3 123 aa20.25■□□□□ 0.83
VSX1-201ENST00000376707 GALNT11Q8NCW6 608 aa20.25■□□□□ 0.83
VSX1-201ENST00000376707 MFRPQ9BY79 579 aa20.25■□□□□ 0.83
VSX1-201ENST00000376707 HOMER3Q9NSC5 361 aa20.25■□□□□ 0.83
VSX1-201ENST00000376707 EURLQ9NYK6 297 aa20.25■□□□□ 0.83
VSX1-201ENST00000376707 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.25■□□□□ 0.83
VSX1-201ENST00000376707 SLC39A10Q9ULF5 831 aa20.25■□□□□ 0.83
VSX1-201ENST00000376707 KLHL20Q9Y2M5 609 aa20.25■□□□□ 0.83
VSX1-201ENST00000376707 PPP2R2CQ9Y2T4 447 aa20.25■□□□□ 0.83
VSX1-201ENST00000376707 SPENQ96T58 3664 aaKnown RBP20.25■□□□□ 0.83
VSX1-201ENST00000376707 TNRC6AQ8NDV7 1962 aaKnown RBP20.25■□□□□ 0.83
VSX1-201ENST00000376707 AP3B1O00203 1094 aa20.24■□□□□ 0.83
VSX1-201ENST00000376707 SORBS2O94875 1100 aaKnown RBP20.24■□□□□ 0.83
VSX1-201ENST00000376707 S1PR4O95977 384 aa20.24■□□□□ 0.83
VSX1-201ENST00000376707 CRADDP78560 199 aa20.24■□□□□ 0.83
VSX1-201ENST00000376707 BASP1P80723 227 aaKnown RBP20.24■□□□□ 0.83
VSX1-201ENST00000376707 RAPSNQ13702 412 aa20.24■□□□□ 0.83
VSX1-201ENST00000376707 NKAIN1Q4KMZ8 207 aa20.24■□□□□ 0.83
VSX1-201ENST00000376707 JMJD6Q6NYC1 403 aaPredicted RBP20.24■□□□□ 0.83
VSX1-201ENST00000376707 TTC23LQ6PF05 361 aa20.24■□□□□ 0.83
VSX1-201ENST00000376707 GSTA5Q7RTV2 222 aa20.24■□□□□ 0.83
VSX1-201ENST00000376707 TAX1BP1Q86VP1 789 aa20.24■□□□□ 0.83
VSX1-201ENST00000376707 CLEC1AQ8NC01 280 aa20.24■□□□□ 0.83
VSX1-201ENST00000376707 OR2Y1Q8NGV0 311 aa20.24■□□□□ 0.83
VSX1-201ENST00000376707 FER1L6-AS2Q96M78 137 aa20.24■□□□□ 0.83
VSX1-201ENST00000376707 IL17FQ96PD4 163 aa20.24■□□□□ 0.83
VSX1-201ENST00000376707 PANX3Q96QZ0 392 aa20.24■□□□□ 0.83
VSX1-201ENST00000376707 IL22Q9GZX6 179 aa20.24■□□□□ 0.83
VSX1-201ENST00000376707 SLAMF7Q9NQ25 335 aa20.24■□□□□ 0.83
VSX1-201ENST00000376707 INTS7Q9NVH2 962 aaKnown RBP20.24■□□□□ 0.83
VSX1-201ENST00000376707 GNPTGQ9UJJ9 305 aa20.24■□□□□ 0.83
VSX1-201ENST00000376707 MAP4K5Q9Y4K4 846 aa20.24■□□□□ 0.83
VSX1-201ENST00000376707 COL12A1Q99715 3063 aa20.23■□□□□ 0.83
VSX1-201ENST00000376707 NRDCO43847 1150 aa20.23■□□□□ 0.83
VSX1-201ENST00000376707 CEP104O60308 925 aa20.23■□□□□ 0.83
VSX1-201ENST00000376707 NDUFS3O75489 264 aa20.23■□□□□ 0.83
VSX1-201ENST00000376707 SLCO2B1O94956 709 aa20.23■□□□□ 0.83
VSX1-201ENST00000376707 IGHEP01854 428 aa20.23■□□□□ 0.83
VSX1-201ENST00000376707 ALAS2P22557 587 aa20.23■□□□□ 0.83
VSX1-201ENST00000376707 GNLYP22749 145 aa20.23■□□□□ 0.83
VSX1-201ENST00000376707 UQCRFS1P47985 274 aa20.23■□□□□ 0.83
VSX1-201ENST00000376707 GRB7Q14451 532 aa20.23■□□□□ 0.83
VSX1-201ENST00000376707 MCATQ8IVS2 390 aaKnown RBP20.23■□□□□ 0.83
VSX1-201ENST00000376707 MPP5Q8N3R9 675 aa20.23■□□□□ 0.83
VSX1-201ENST00000376707 OTUD6BQ8N6M0 293 aa20.23■□□□□ 0.83
VSX1-201ENST00000376707 LMNTD1Q8N9Z9 388 aa20.23■□□□□ 0.83
VSX1-201ENST00000376707 OR2L8Q8NGY9 312 aa20.23■□□□□ 0.83
VSX1-201ENST00000376707 SKA2Q8WVK7 121 aaPredicted RBP20.23■□□□□ 0.83
VSX1-201ENST00000376707 DLG3Q92796 817 aa20.23■□□□□ 0.83
VSX1-201ENST00000376707 SMAD5Q99717 465 aaKnown RBP20.23■□□□□ 0.83
VSX1-201ENST00000376707 MENTQ9BUN1 341 aa20.23■□□□□ 0.83
VSX1-201ENST00000376707 TREX1Q9NSU2 369 aa20.23■□□□□ 0.83
VSX1-201ENST00000376707 BFARQ9NZS9 450 aa20.23■□□□□ 0.83
VSX1-201ENST00000376707 LUZP4Q9P127 313 aa20.23■□□□□ 0.83
VSX1-201ENST00000376707 DOPEY2Q9Y3R5 2298 aa20.23■□□□□ 0.83
VSX1-201ENST00000376707 MAST4O15021 2626 aa20.22■□□□□ 0.83
VSX1-201ENST00000376707 RASGRF2O14827 1237 aa20.22■□□□□ 0.83
VSX1-201ENST00000376707 KPNA5O15131 536 aa20.22■□□□□ 0.83
VSX1-201ENST00000376707 CXCR5P32302 372 aa20.22■□□□□ 0.83
VSX1-201ENST00000376707 KCNJ1P48048 391 aa20.22■□□□□ 0.83
VSX1-201ENST00000376707 NPY2RP49146 381 aa20.22■□□□□ 0.83
VSX1-201ENST00000376707 ARSFP54793 590 aa20.22■□□□□ 0.83
VSX1-201ENST00000376707 CDK16Q00536 496 aa20.22■□□□□ 0.83
VSX1-201ENST00000376707 SF1Q15637 639 aaKnown RBP20.22■□□□□ 0.83
VSX1-201ENST00000376707 INPP5JQ15735 1006 aaPredicted RBP20.22■□□□□ 0.83
VSX1-201ENST00000376707 VWA5B1Q5TIE3 1220 aa20.22■□□□□ 0.83
VSX1-201ENST00000376707 SLC6A19Q695T7 634 aa20.22■□□□□ 0.83
VSX1-201ENST00000376707 OTOAQ7RTW8 1153 aa20.22■□□□□ 0.83
VSX1-201ENST00000376707 LRRC6Q86X45 466 aa20.22■□□□□ 0.83
VSX1-201ENST00000376707 PRELID2Q8N945 189 aa20.22■□□□□ 0.83
VSX1-201ENST00000376707 DENND1AQ8TEH3 1009 aa20.22■□□□□ 0.83
VSX1-201ENST00000376707 PTERQ96BW5 349 aa20.22■□□□□ 0.83
VSX1-201ENST00000376707 RAB11FIP5Q9BXF6 653 aa20.22■□□□□ 0.83
VSX1-201ENST00000376707 P2RY12Q9H244 342 aa20.22■□□□□ 0.83
VSX1-201ENST00000376707 LRRK2Q5S007 2527 aa20.21■□□□□ 0.83
VSX1-201ENST00000376707 GP1BBP13224 206 aa20.21■□□□□ 0.83
VSX1-201ENST00000376707 TPSB2P20231 275 aa20.21■□□□□ 0.83
VSX1-201ENST00000376707 NMBRP28336 390 aa20.21■□□□□ 0.83
VSX1-201ENST00000376707 TPSAB1Q15661 275 aa20.21■□□□□ 0.83
VSX1-201ENST00000376707 ZC3H12BQ5HYM0 836 aaKnown RBP20.21■□□□□ 0.83
VSX1-201ENST00000376707 DCAF10Q5QP82 559 aa20.21■□□□□ 0.83
VSX1-201ENST00000376707 MRPL14Q6P1L8 145 aaKnown RBP20.21■□□□□ 0.83
VSX1-201ENST00000376707 TTLL10Q6ZVT0 673 aa20.21■□□□□ 0.83
VSX1-201ENST00000376707 RAB42Q8N4Z0 105 aa20.21■□□□□ 0.83
VSX1-201ENST00000376707 RBMXL3Q8N7X1 1067 aaKnown RBP20.21■□□□□ 0.83
VSX1-201ENST00000376707 PNPLA2Q96AD5 504 aa20.21■□□□□ 0.83
VSX1-201ENST00000376707 RAD51AP1Q96B01 352 aa20.21■□□□□ 0.83
VSX1-201ENST00000376707 P4HTMQ9NXG6 502 aa20.21■□□□□ 0.83
VSX1-201ENST00000376707 C5AR2Q9P296 337 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms