RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 DLGAP4Q9Y2H0 992 aa14.21□□□□□ -0.14
MSH5-201ENST00000375703 SLC1A7O00341 560 aa14.2□□□□□ -0.14
MSH5-201ENST00000375703 PER2O15055 1255 aa14.2□□□□□ -0.14
MSH5-201ENST00000375703 SLC16A6O15403 523 aa14.2□□□□□ -0.14
MSH5-201ENST00000375703 COQ9O75208 318 aa14.2□□□□□ -0.14
MSH5-201ENST00000375703 BCAS1O75363 584 aaPredicted RBP14.2□□□□□ -0.14
MSH5-201ENST00000375703 RYKP34925 604 aa14.2□□□□□ -0.14
MSH5-201ENST00000375703 NR1D2Q14995 579 aa14.2□□□□□ -0.14
MSH5-201ENST00000375703 CDKN3Q16667 212 aa14.2□□□□□ -0.14
MSH5-201ENST00000375703 RFX4Q33E94 735 aa14.2□□□□□ -0.14
MSH5-201ENST00000375703 GPR33Q49SQ1 333 aa14.2□□□□□ -0.14
MSH5-201ENST00000375703 LRIF1Q5T3J3 769 aa14.2□□□□□ -0.14
MSH5-201ENST00000375703 CES5AQ6NT32 575 aa14.2□□□□□ -0.14
MSH5-201ENST00000375703 APCDD1Q8J025 514 aa14.2□□□□□ -0.14
MSH5-201ENST00000375703 CENPSQ8N2Z9 138 aa14.2□□□□□ -0.14
MSH5-201ENST00000375703 MUL1Q969V5 352 aa14.2□□□□□ -0.14
MSH5-201ENST00000375703 SLC32A1Q9H598 525 aa14.2□□□□□ -0.14
MSH5-201ENST00000375703 PALMDQ9NP74 551 aa14.2□□□□□ -0.14
MSH5-201ENST00000375703 RNF186Q9NXI6 227 aa14.2□□□□□ -0.14
MSH5-201ENST00000375703 ARL15Q9NXU5 204 aa14.2□□□□□ -0.14
MSH5-201ENST00000375703 DNMT3BQ9UBC3 853 aaKnown RBP14.2□□□□□ -0.14
MSH5-201ENST00000375703 TMEFF2Q9UIK5 374 aaPredicted RBP14.2□□□□□ -0.14
MSH5-201ENST00000375703 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.2□□□□□ -0.14
MSH5-201ENST00000375703 CFAP99D6REC4 459 aa14.2□□□□□ -0.14
MSH5-201ENST00000375703 ARHGEF15O94989 841 aa14.2□□□□□ -0.14
MSH5-201ENST00000375703 IL1RNP18510 177 aa14.2□□□□□ -0.14
MSH5-201ENST00000375703 HTR1BP28222 390 aa14.2□□□□□ -0.14
MSH5-201ENST00000375703 PHEXP78562 749 aa14.2□□□□□ -0.14
MSH5-201ENST00000375703 CDK5R2Q13319 367 aa14.2□□□□□ -0.14
MSH5-201ENST00000375703 GPNMBQ14956 572 aa14.2□□□□□ -0.14
MSH5-201ENST00000375703 SPCS2Q15005 226 aa14.2□□□□□ -0.14
MSH5-201ENST00000375703 C1QTNF12Q5T7M4 302 aa14.2□□□□□ -0.14
MSH5-201ENST00000375703 GRAMD4Q6IC98 578 aa14.2□□□□□ -0.14
MSH5-201ENST00000375703 KIAA1841Q6NSI8 718 aa14.2□□□□□ -0.14
MSH5-201ENST00000375703 HJURPQ8NCD3 748 aaPredicted RBP14.2□□□□□ -0.14
MSH5-201ENST00000375703 POP5Q969H6 163 aaKnown RBP14.2□□□□□ -0.14
MSH5-201ENST00000375703 TSSK3Q96PN8 268 aa14.2□□□□□ -0.14
MSH5-201ENST00000375703 STARD7Q9NQZ5 370 aa14.2□□□□□ -0.14
MSH5-201ENST00000375703 AFF4Q9UHB7 1163 aaKnown RBP14.2□□□□□ -0.14
MSH5-201ENST00000375703 MAN2B2Q9Y2E5 1009 aa14.2□□□□□ -0.14
MSH5-201ENST00000375703 COQ6Q9Y2Z9 468 aa14.2□□□□□ -0.14
MSH5-201ENST00000375703 XYLBO75191 536 aa14.19□□□□□ -0.14
MSH5-201ENST00000375703 INMTO95050 263 aa14.19□□□□□ -0.14
MSH5-201ENST00000375703 PRPS2P11908 318 aa14.19□□□□□ -0.14
MSH5-201ENST00000375703 HOXB6P17509 224 aaKnown RBP14.19□□□□□ -0.14
MSH5-201ENST00000375703 SPAM1P38567 509 aa14.19□□□□□ -0.14
MSH5-201ENST00000375703 NEK2P51955 445 aa14.19□□□□□ -0.14
MSH5-201ENST00000375703 MLLT10P55197 1068 aa14.19□□□□□ -0.14
MSH5-201ENST00000375703 IL5RAQ01344 420 aa14.19□□□□□ -0.14
MSH5-201ENST00000375703 ITGADQ13349 1161 aa14.19□□□□□ -0.14
MSH5-201ENST00000375703 RETSATQ6NUM9 610 aa14.19□□□□□ -0.14
MSH5-201ENST00000375703 ZDHHC21Q8IVQ6 265 aa14.19□□□□□ -0.14
MSH5-201ENST00000375703 NXPE1Q8N323 547 aa14.19□□□□□ -0.14
MSH5-201ENST00000375703 DCAF4L2Q8NA75 395 aa14.19□□□□□ -0.14
MSH5-201ENST00000375703 MRPL9Q9BYD2 267 aaKnown RBP14.19□□□□□ -0.14
MSH5-201ENST00000375703 TNKS2Q9H2K2 1166 aa14.19□□□□□ -0.14
MSH5-201ENST00000375703 PAK1IP1Q9NWT1 392 aaPredicted RBP14.19□□□□□ -0.14
MSH5-201ENST00000375703 KCTD5Q9NXV2 234 aa14.19□□□□□ -0.14
MSH5-201ENST00000375703 BCKDKO14874 412 aa14.19□□□□□ -0.14
MSH5-201ENST00000375703 NDUFS2O75306 463 aa14.19□□□□□ -0.14
MSH5-201ENST00000375703 DNAJB5O75953 348 aa14.19□□□□□ -0.14
MSH5-201ENST00000375703 ITIH1P19827 911 aa14.19□□□□□ -0.14
MSH5-201ENST00000375703 PCMT1P22061 227 aa14.19□□□□□ -0.14
MSH5-201ENST00000375703 ALDH7A1P49419 539 aaKnown RBP14.19□□□□□ -0.14
MSH5-201ENST00000375703 ABHD18Q0P651 414 aa14.19□□□□□ -0.14
MSH5-201ENST00000375703 IL18R1Q13478 541 aa14.19□□□□□ -0.14
MSH5-201ENST00000375703 AQP6Q13520 282 aa14.19□□□□□ -0.14
MSH5-201ENST00000375703 ATP1A4Q13733 1029 aa14.19□□□□□ -0.14
MSH5-201ENST00000375703 ZC3H12BQ5HYM0 836 aaKnown RBP14.19□□□□□ -0.14
MSH5-201ENST00000375703 SLC16A12Q6ZSM3 486 aa14.19□□□□□ -0.14
MSH5-201ENST00000375703 GALNT5Q7Z7M9 940 aa14.19□□□□□ -0.14
MSH5-201ENST00000375703 BEND7Q8N7W2 519 aaPredicted RBP14.19□□□□□ -0.14
MSH5-201ENST00000375703 ABHD11Q8NFV4 315 aa14.19□□□□□ -0.14
MSH5-201ENST00000375703 ZNF461Q8TAF7 563 aa14.19□□□□□ -0.14
MSH5-201ENST00000375703 CNIH3Q8TBE1 160 aa14.19□□□□□ -0.14
MSH5-201ENST00000375703 REXO5Q96IC2 774 aaKnown RBP14.19□□□□□ -0.14
MSH5-201ENST00000375703 C2orf49Q9BVC5 232 aaPredicted RBP14.19□□□□□ -0.14
MSH5-201ENST00000375703 TRIT1Q9H3H1 467 aaKnown RBP14.19□□□□□ -0.14
MSH5-201ENST00000375703 ELOVL6Q9H5J4 265 aa14.19□□□□□ -0.14
MSH5-201ENST00000375703 SH3GLB1Q9Y371 365 aa14.19□□□□□ -0.14
MSH5-201ENST00000375703 DGKBQ9Y6T7 804 aa14.19□□□□□ -0.14
MSH5-201ENST00000375703 A0A1W2PQ45 241 aaPredicted RBP14.18□□□□□ -0.14
MSH5-201ENST00000375703 A0A1W2PQY0 241 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 WNT9AO14904 365 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 HOXA2O43364 376 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 XPNPEP2O43895 674 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 B3GALT4O96024 378 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 FTH1P02794 183 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 CCDC159P0C7I6 412 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 EPORP19235 508 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 TACR1P25103 407 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 CDKN2CP42773 168 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 NSG1P42857 185 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 TM4SF4P48230 202 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 SEMG2Q02383 582 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 RAPSNQ13702 412 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 DOK6Q6PKX4 331 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 TSPAN33Q86UF1 283 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 ANKRD13BQ86YJ7 626 aa14.18□□□□□ -0.14
MSH5-201ENST00000375703 GPR26Q8NDV2 337 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms