RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 KCNK16Q96T55 309 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 KXD1Q9BQD3 176 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 POLDIP3Q9BY77 421 aaKnown RBP4.49□□□□□ -1.69
PMS1-202ENST00000374826 TSPY26PQ9H489 355 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 UBE2TQ9NPD8 197 aaPredicted RBP4.49□□□□□ -1.69
PMS1-202ENST00000374826 DMAP1Q9NPF5 467 aaPredicted RBP4.49□□□□□ -1.69
PMS1-202ENST00000374826 ACP6Q9NPH0 428 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 FAM207AQ9NSI2 230 aaPredicted RBP4.49□□□□□ -1.69
PMS1-202ENST00000374826 LIMA1Q9UHB6 759 aaKnown RBP4.49□□□□□ -1.69
PMS1-202ENST00000374826 DNAJC12Q9UKB3 198 aa4.49□□□□□ -1.69
PMS1-202ENST00000374826 TNRC6BQ9UPQ9 1833 aaKnown RBP4.49□□□□□ -1.69
PMS1-202ENST00000374826 MUC22E2RYF6 1773 aaPredicted RBP4.48□□□□□ -1.69
PMS1-202ENST00000374826 TMEM131Q92545 1883 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 A0A1B0GVT2 93 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 SAC3D1A6NKF1 404 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 SMTNL1A8MU46 457 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 GOLGA6L19H0YKK7 550 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 STMND1H3BQB6 276 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 M0QYV0 167 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 TULP2O00295 520 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 O00370 1275 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 NOL4O94818 638 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 PRAMEF12O95522 483 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 CSTBP04080 98 aaKnown RBP4.48□□□□□ -1.69
PMS1-202ENST00000374826 ACAA1P09110 424 aaPredicted RBP4.48□□□□□ -1.69
PMS1-202ENST00000374826 FAM200BP0CF97 657 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 CSH1P0DML2 217 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 CSH2P0DML3 217 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 UNGP13051 313 aaPredicted RBP4.48□□□□□ -1.69
PMS1-202ENST00000374826 HOXD3P31249 432 aaPredicted RBP4.48□□□□□ -1.69
PMS1-202ENST00000374826 ZNF132P52740 706 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 MFAP3P55082 362 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 TMPRSS3P57727 454 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 ZP1P60852 638 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 TPM4P67936 248 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 GCNT1Q02742 428 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 UBXN1Q04323 297 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 GPS2Q13227 327 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 HTR4Q13639 388 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 FNBP1LQ5T0N5 605 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 TXNDC8Q6A555 127 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 C1orf228Q6PIY5 440 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 CYP26C1Q6V0L0 522 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 DENND5BQ6ZUT9 1274 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 TMEM150AQ86TG1 271 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 CUZD1Q86UP6 607 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 CRYBG2Q8N1P7 616 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 PTGR2Q8N8N7 351 aaPredicted RBP4.48□□□□□ -1.69
PMS1-202ENST00000374826 UBA3Q8TBC4 463 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 STT3BQ8TCJ2 826 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 SHC3Q92529 594 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 TRAPPC9Q96Q05 1148 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 FRG2BQ96QU4 278 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 HNRNPABQ99729 332 aaKnown RBP4.48□□□□□ -1.69
PMS1-202ENST00000374826 GPR88Q9GZN0 384 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 DNAI2Q9GZS0 605 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 CLPBQ9H078 707 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 GANQ9H2C0 597 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 CATSPERBQ9H7T0 1116 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 TRPC7Q9HCX4 862 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 PLCB1Q9NQ66 1216 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 MUTYHQ9UIF7 546 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 TSPAN16Q9UKR8 245 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 CDH7Q9ULB5 785 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 RAP2CQ9Y3L5 183 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 ASB3Q9Y575 518 aa4.48□□□□□ -1.69
PMS1-202ENST00000374826 ZFC3H1O60293 1989 aaKnown RBP4.47□□□□□ -1.69
PMS1-202ENST00000374826 TRPM6Q9BX84 2022 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 TMEM247A6NEH6 219 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 HHLA1C9JL84 531 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 F5H423 210 aaPredicted RBP4.47□□□□□ -1.69
PMS1-202ENST00000374826 F8VZ95 297 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 I6L893 689 aaPredicted RBP4.47□□□□□ -1.69
PMS1-202ENST00000374826 ZNF197O14709 1029 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 GFPT2O94808 682 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 TMCC1O94876 653 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 RTN3O95197 1032 aaPredicted RBP4.47□□□□□ -1.69
PMS1-202ENST00000374826 SERPINC1P01008 464 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 IGKV3-20P01619 116 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 PAEPP09466 180 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 VDRP11473 427 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 LYL1P12980 280 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 LAMP2P13473 410 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 UCHL3P15374 230 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 FCARP24071 287 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 PRKCHP24723 683 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 YWHAQP27348 245 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 CDC25CP30307 473 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 PCYT1AP49585 367 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 PGFP49763 221 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 RGS7P49802 495 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 POLR2FP61218 127 aaKnown RBP4.47□□□□□ -1.69
PMS1-202ENST00000374826 ADIGQ0VDE8 80 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 Q0VFX4 171 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 BST2Q10589 180 aaKnown RBP4.47□□□□□ -1.69
PMS1-202ENST00000374826 TAF10Q12962 218 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 PDCLQ13371 301 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 BLMHQ13867 455 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 KEAP1Q14145 624 aa4.47□□□□□ -1.69
PMS1-202ENST00000374826 DRAP1Q14919 205 aaPredicted RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms