RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 LRTM1Q9HBL6 345 aa16.42■□□□□ 0.22
PTPN20-203ENST00000374342 SPAG4Q9NPE6 437 aa16.42■□□□□ 0.22
PTPN20-203ENST00000374342 INTS7Q9NVH2 962 aaKnown RBP16.42■□□□□ 0.22
PTPN20-203ENST00000374342 G6PDP11413 515 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 ME2P23368 584 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 MSX2P35548 267 aaPredicted RBP16.41■□□□□ 0.22
PTPN20-203ENST00000374342 POLR2JP52435 117 aaKnown RBP16.41■□□□□ 0.22
PTPN20-203ENST00000374342 IRF8Q02556 426 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 PLOD1Q02809 727 aaPredicted RBP16.41■□□□□ 0.22
PTPN20-203ENST00000374342 TIGD2Q4W5G0 525 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 XKR6Q5GH73 641 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 FAM124AQ86V42 546 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 SLC44A3Q8N4M1 653 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 SPDYE1Q8NFV5 336 aaPredicted RBP16.41■□□□□ 0.22
PTPN20-203ENST00000374342 DNASE1L2Q92874 299 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 VPS33AQ96AX1 596 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 DPEP2Q9H4A9 486 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 TRPV5Q9NQA5 729 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 TM7SF3Q9NS93 570 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 EYSQ5T1H1 3165 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 FAM234BA2RU67 622 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 TRIM38O00635 465 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 SEC22BO75396 215 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 ASGR2P07307 311 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 GNAZP19086 355 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 TCN1P20061 433 aaPredicted RBP16.41■□□□□ 0.22
PTPN20-203ENST00000374342 POU3F3P20264 500 aaPredicted RBP16.41■□□□□ 0.22
PTPN20-203ENST00000374342 IL12AP29459 219 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 MAT2AP31153 395 aaKnown RBP16.41■□□□□ 0.22
PTPN20-203ENST00000374342 GNPDA1P46926 289 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 NEK2P51955 445 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 TBPL1P62380 186 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 AP2B1P63010 937 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 MAD2L1Q13257 205 aaPredicted RBP16.41■□□□□ 0.22
PTPN20-203ENST00000374342 TSTA3Q13630 321 aaPredicted RBP16.41■□□□□ 0.22
PTPN20-203ENST00000374342 FLOT2Q14254 428 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 TMEM259Q4ZIN3 620 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 PDZD3Q86UT5 571 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 KLHDC8AQ8IYD2 350 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 SYTL1Q8IYJ3 562 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 FBXO15Q8NCQ5 510 aaPredicted RBP16.41■□□□□ 0.22
PTPN20-203ENST00000374342 FAM156AQ8NDB6 213 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 OR56A3Q8NH54 315 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 ZNF480Q8WV37 535 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 PYDC1Q8WXC3 89 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 FAM131CQ96AQ9 280 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 MAGEB10Q96LZ2 347 aaPredicted RBP16.41■□□□□ 0.22
PTPN20-203ENST00000374342 MYOCQ99972 504 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 C1QTNF2Q9BXJ5 285 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 OR52A5Q9H2C5 316 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 FZD3Q9NPG1 666 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 SLC52A3Q9NQ40 469 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 PHPT1Q9NRX4 125 aaPredicted RBP16.41■□□□□ 0.22
PTPN20-203ENST00000374342 STX18Q9P2W9 335 aaKnown RBP16.41■□□□□ 0.22
PTPN20-203ENST00000374342 SLC23A2Q9UGH3 650 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 PSMD13Q9UNM6 376 aa16.41■□□□□ 0.22
PTPN20-203ENST00000374342 EIF3LQ9Y262 564 aaKnown RBP16.41■□□□□ 0.22
PTPN20-203ENST00000374342 ASPDHA6ND91 283 aa16.4■□□□□ 0.22
PTPN20-203ENST00000374342 CCDC154A6NI56 674 aa16.4■□□□□ 0.22
PTPN20-203ENST00000374342 FKBP6O75344 327 aa16.4■□□□□ 0.22
PTPN20-203ENST00000374342 ANP32DO95626 131 aa16.4■□□□□ 0.22
PTPN20-203ENST00000374342 JUPP14923 745 aa16.4■□□□□ 0.22
PTPN20-203ENST00000374342 SLC7A2P52569 658 aa16.4■□□□□ 0.22
PTPN20-203ENST00000374342 C8orf82Q6P1X6 216 aaPredicted RBP16.4■□□□□ 0.22
PTPN20-203ENST00000374342 ZFAND4Q86XD8 727 aa16.4■□□□□ 0.22
PTPN20-203ENST00000374342 HOMEZQ8IX15 550 aa16.4■□□□□ 0.22
PTPN20-203ENST00000374342 RPLP0P6Q8NHW5 317 aa16.4■□□□□ 0.22
PTPN20-203ENST00000374342 PROKR1Q8TCW9 393 aa16.4■□□□□ 0.22
PTPN20-203ENST00000374342 SIPA1Q96FS4 1042 aa16.4■□□□□ 0.22
PTPN20-203ENST00000374342 LRCH3Q96II8 777 aa16.4■□□□□ 0.22
PTPN20-203ENST00000374342 OR4K3Q96R72 315 aa16.4■□□□□ 0.22
PTPN20-203ENST00000374342 ACTL8Q9H568 366 aa16.4■□□□□ 0.22
PTPN20-203ENST00000374342 C1orf109Q9NX04 203 aa16.4■□□□□ 0.22
PTPN20-203ENST00000374342 MAP10Q9P2G4 905 aa16.4■□□□□ 0.22
PTPN20-203ENST00000374342 STOML1Q9UBI4 398 aa16.4■□□□□ 0.22
PTPN20-203ENST00000374342 ANGPTL2Q9UKU9 493 aa16.4■□□□□ 0.22
PTPN20-203ENST00000374342 TBC1D3DA0A087WVF3 549 aa16.39■□□□□ 0.21
PTPN20-203ENST00000374342 TBC1D3IA0A087WXS9 549 aa16.39■□□□□ 0.21
PTPN20-203ENST00000374342 TBC1D3EA0A087X179 549 aa16.39■□□□□ 0.21
PTPN20-203ENST00000374342 TBC1D3KA0A087X1G2 549 aa16.39■□□□□ 0.21
PTPN20-203ENST00000374342 A0A1W2PP18 115 aa16.39■□□□□ 0.21
PTPN20-203ENST00000374342 TBC1D3FA6NER0 549 aaPredicted RBP16.39■□□□□ 0.21
PTPN20-203ENST00000374342 TBC1D3LB9A6J9 549 aa16.39■□□□□ 0.21
PTPN20-203ENST00000374342 TBC1D3HP0C7X1 549 aa16.39■□□□□ 0.21
PTPN20-203ENST00000374342 MYCLP1P12525 358 aaPredicted RBP16.39■□□□□ 0.21
PTPN20-203ENST00000374342 CD22P20273 847 aa16.39■□□□□ 0.21
PTPN20-203ENST00000374342 ACADLP28330 430 aa16.39■□□□□ 0.21
PTPN20-203ENST00000374342 TEAD1P28347 426 aa16.39■□□□□ 0.21
PTPN20-203ENST00000374342 IGFALSP35858 605 aa16.39■□□□□ 0.21
PTPN20-203ENST00000374342 CASP2P42575 452 aa16.39■□□□□ 0.21
PTPN20-203ENST00000374342 PTDSS1P48651 473 aaKnown RBP16.39■□□□□ 0.21
PTPN20-203ENST00000374342 ATXN3P54252 364 aaPredicted RBP16.39■□□□□ 0.21
PTPN20-203ENST00000374342 PPP2CBP62714 309 aa16.39■□□□□ 0.21
PTPN20-203ENST00000374342 PPP2CAP67775 309 aa16.39■□□□□ 0.21
PTPN20-203ENST00000374342 MRPS21P82921 87 aaKnown RBP16.39■□□□□ 0.21
PTPN20-203ENST00000374342 SLC34A1Q06495 639 aa16.39■□□□□ 0.21
PTPN20-203ENST00000374342 PRKG2Q13237 762 aa16.39■□□□□ 0.21
PTPN20-203ENST00000374342 SMAD4Q13485 552 aaKnown RBP16.39■□□□□ 0.21
PTPN20-203ENST00000374342 CAPRIN1Q14444 709 aaKnown RBP16.39■□□□□ 0.21
PTPN20-203ENST00000374342 PTGR1Q14914 329 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms