RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 CDKN2DP55273 166 aa12.63□□□□□ -0.39
PRPF4-201ENST00000374198 CSNK2BP67870 215 aa12.63□□□□□ -0.39
PRPF4-201ENST00000374198 LAMTOR4Q0VGL1 99 aa12.63□□□□□ -0.39
PRPF4-201ENST00000374198 DSC3Q14574 896 aa12.63□□□□□ -0.39
PRPF4-201ENST00000374198 PON2Q15165 354 aa12.63□□□□□ -0.39
PRPF4-201ENST00000374198 TAF1CQ15572 869 aaPredicted RBP12.63□□□□□ -0.39
PRPF4-201ENST00000374198 OTUD1Q5VV17 481 aaPredicted RBP12.63□□□□□ -0.39
PRPF4-201ENST00000374198 SYPL2Q5VXT5 272 aa12.63□□□□□ -0.39
PRPF4-201ENST00000374198 TMEM65Q6PI78 240 aa12.63□□□□□ -0.39
PRPF4-201ENST00000374198 PAMR1Q6UXH9 720 aa12.63□□□□□ -0.39
PRPF4-201ENST00000374198 OR10A6Q8NH74 314 aa12.63□□□□□ -0.39
PRPF4-201ENST00000374198 ZNF675Q8TD23 568 aa12.63□□□□□ -0.39
PRPF4-201ENST00000374198 APH1BQ8WW43 257 aa12.63□□□□□ -0.39
PRPF4-201ENST00000374198 REPS1Q96D71 796 aa12.63□□□□□ -0.39
PRPF4-201ENST00000374198 DCAF13Q9NV06 445 aaKnown RBP12.63□□□□□ -0.39
PRPF4-201ENST00000374198 CXCL11O14625 94 aa12.63□□□□□ -0.39
PRPF4-201ENST00000374198 MAFO75444 373 aaPredicted RBP12.63□□□□□ -0.39
PRPF4-201ENST00000374198 PAPSS2O95340 614 aaPredicted RBP12.63□□□□□ -0.39
PRPF4-201ENST00000374198 F9P00740 461 aa12.63□□□□□ -0.39
PRPF4-201ENST00000374198 RGS6P49758 472 aa12.63□□□□□ -0.39
PRPF4-201ENST00000374198 MAP3K7CLP57077 242 aa12.63□□□□□ -0.39
PRPF4-201ENST00000374198 PLIN5Q00G26 463 aa12.63□□□□□ -0.39
PRPF4-201ENST00000374198 CREMQ03060 361 aa12.63□□□□□ -0.39
PRPF4-201ENST00000374198 SCN1BQ07699 218 aa12.63□□□□□ -0.39
PRPF4-201ENST00000374198 ASAH1Q13510 395 aa12.63□□□□□ -0.39
PRPF4-201ENST00000374198 FBXO43Q4G163 708 aa12.63□□□□□ -0.39
PRPF4-201ENST00000374198 XKR7Q5GH72 579 aa12.63□□□□□ -0.39
PRPF4-201ENST00000374198 HABP4Q5JVS0 413 aaKnown RBP12.63□□□□□ -0.39
PRPF4-201ENST00000374198 ARHGAP17Q68EM7 881 aa12.63□□□□□ -0.39
PRPF4-201ENST00000374198 FAM126BQ8IXS8 530 aa12.63□□□□□ -0.39
PRPF4-201ENST00000374198 IPMKQ8NFU5 416 aa12.63□□□□□ -0.39
PRPF4-201ENST00000374198 TRAF4Q9BUZ4 470 aaPredicted RBP12.63□□□□□ -0.39
PRPF4-201ENST00000374198 GTPBP2Q9BX10 602 aaKnown RBP12.63□□□□□ -0.39
PRPF4-201ENST00000374198 FAM124BQ9H5Z6 455 aaPredicted RBP12.63□□□□□ -0.39
PRPF4-201ENST00000374198 SMURF1Q9HCE7 757 aa12.63□□□□□ -0.39
PRPF4-201ENST00000374198 TNFRSF10DQ9UBN6 386 aa12.63□□□□□ -0.39
PRPF4-201ENST00000374198 STOML2Q9UJZ1 356 aa12.63□□□□□ -0.39
PRPF4-201ENST00000374198 AAR2Q9Y312 384 aaKnown RBP12.63□□□□□ -0.39
PRPF4-201ENST00000374198 DOCK1Q14185 1865 aa12.63□□□□□ -0.39
PRPF4-201ENST00000374198 ELOVL7A1L3X0 281 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 I3L521 148 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 DFFAO00273 331 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 ERN1O75460 977 aaKnown RBP12.62□□□□□ -0.39
PRPF4-201ENST00000374198 MT-CYBP00156 380 aaPredicted RBP12.62□□□□□ -0.39
PRPF4-201ENST00000374198 ZNF250P15622 560 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 CD72P21854 359 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 AZGP1P25311 298 aaKnown RBP12.62□□□□□ -0.39
PRPF4-201ENST00000374198 HOXA9P31269 272 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 DAB2P98082 770 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 SP2Q02086 613 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 LCP2Q13094 533 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 CRHR2Q13324 411 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 ZNF79Q15937 498 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 KIAA1614Q5VZ46 1190 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 TIGD7Q6NT04 549 aaPredicted RBP12.62□□□□□ -0.39
PRPF4-201ENST00000374198 PLEKHM3Q6ZWE6 761 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 CEP68Q76N32 757 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 NLRP8Q86W28 1048 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 KLHDC8BQ8IXV7 354 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 RYBPQ8N488 228 aaPredicted RBP12.62□□□□□ -0.39
PRPF4-201ENST00000374198 PNPLA1Q8N8W4 532 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 GALNT11Q8NCW6 608 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 LPIN3Q9BQK8 851 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 MRPL45Q9BRJ2 306 aaKnown RBP12.62□□□□□ -0.39
PRPF4-201ENST00000374198 THUMPD3Q9BV44 507 aaKnown RBP12.62□□□□□ -0.39
PRPF4-201ENST00000374198 BBS2Q9BXC9 721 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 R3HDMLQ9H3Y0 253 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 VAPAQ9P0L0 249 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 KLK4Q9Y5K2 254 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 CASP8AP2Q9UKL3 1982 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 ZNF638Q14966 1978 aaKnown RBP12.62□□□□□ -0.39
PRPF4-201ENST00000374198 TSPAN4O14817 238 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 MUSKO15146 869 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 RGS5O15539 181 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 KYAT1Q16773 422 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 SETMARQ53H47 684 aaPredicted RBP12.62□□□□□ -0.39
PRPF4-201ENST00000374198 CARD16Q5EG05 197 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 ZBTB37Q5TC79 503 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 SCIMPQ6UWF3 145 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 PIM3Q86V86 326 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 OR10Z1Q8NGY1 313 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 OR2T11Q8NH01 316 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 MYDGFQ969H8 173 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 COQ8BQ96D53 544 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 FICDQ9BVA6 458 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 SRRQ9GZT4 340 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 SEMA4BQ9NPR2 832 aaPredicted RBP12.62□□□□□ -0.39
PRPF4-201ENST00000374198 ATPIF1Q9UII2 106 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 TLR6Q9Y2C9 796 aa12.62□□□□□ -0.39
PRPF4-201ENST00000374198 CITO14578 2027 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 A8MUA0 341 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 NT5C1B-RDH14C9J2C7 533 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 CACNG3O60359 315 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 RETP07949 1114 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 STAG3L1P0CL83 205 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 MTHFD2P13995 350 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 CD1DP15813 335 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 SLC19A1P41440 591 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 ARHGDIAP52565 204 aa12.61□□□□□ -0.39
PRPF4-201ENST00000374198 DGKQP52824 942 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms