RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 CEP76Q8TAP6 659 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 FAM84AQ96KN4 292 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 GIN1Q9NXP7 522 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 SPATA7Q9P0W8 599 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 C9JVG2 144 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 H0YGN5 161 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 H0YJX3 145 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 DCDC1P59894 354 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 LILRA4P59901 499 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 CBLBQ13191 982 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 PRAMEF17Q5VTA0 474 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 RNF220Q5VTB9 566 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 PRSS58Q8IYP2 241 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 ZNF599Q96NL3 588 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 EFCAB11Q9BUY7 163 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 LYARQ9NX58 379 aaKnown RBP11.31□□□□□ -0.6
VCL-202ENST00000372755 PCDHGB2Q9Y5G2 931 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.31□□□□□ -0.6
VCL-202ENST00000372755 CDH1P12830 882 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 PRPS1L1P21108 318 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 AGXTP21549 392 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 SLC1A2P43004 574 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 XKP51811 444 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 FASTKD3Q14CZ7 662 aaKnown RBP11.31□□□□□ -0.6
VCL-202ENST00000372755 TNFAIP8L2Q6P589 184 aaPredicted RBP11.31□□□□□ -0.6
VCL-202ENST00000372755 FITM2Q8N6M3 262 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 OR2L8Q8NGY9 312 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 LRRC3Q9BY71 257 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 ITM2CQ9NQX7 267 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 P2RX2Q9UBL9 471 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 ASB3Q9Y575 518 aa11.31□□□□□ -0.6
VCL-202ENST00000372755 KANTRA0A1W2PQU2 76 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 A0A1W2PRQ8 180 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 PPEF2O14830 753 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 NUAK1O60285 661 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 CLPXO76031 633 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 CD48P09326 243 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 MAT2AP31153 395 aaKnown RBP11.3□□□□□ -0.6
VCL-202ENST00000372755 BTN3A2P78410 334 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 LRRC32Q14392 662 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 COLEC12Q5KU26 742 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 C1orf189Q5VU69 101 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 SLC51AQ86UW1 340 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 CLIP4Q8N3C7 705 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 OR10G2Q8NGC3 310 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 OVCA2Q8WZ82 227 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 FUBP3Q96I24 572 aaKnown RBP eCLIP11.3□□□□□ -0.6
VCL-202ENST00000372755 EPYCQ99645 322 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 DPYSL5Q9BPU6 564 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 B3GNT4Q9C0J1 378 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 POLR2J2Q9GZM3 115 aaKnown RBP11.3□□□□□ -0.6
VCL-202ENST00000372755 MAGEE1Q9HCI5 957 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 GDAP2Q9NXN4 497 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 TELO2Q9Y4R8 837 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 PCDHAC2Q9Y5I4 1007 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 TRIM64A6NGJ6 449 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 PEPDP12955 493 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 PEX2P28328 305 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 APLP1P51693 650 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 EEFSECP57772 596 aaKnown RBP11.3□□□□□ -0.6
VCL-202ENST00000372755 HGSNATQ68CP4 663 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 CWF19L1Q69YN2 538 aaKnown RBP11.3□□□□□ -0.6
VCL-202ENST00000372755 PDE12Q6L8Q7 609 aaKnown RBP11.3□□□□□ -0.6
VCL-202ENST00000372755 TMEM214Q6NUQ4 689 aaKnown RBP11.3□□□□□ -0.6
VCL-202ENST00000372755 OTOP2Q7RTS6 562 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 KREMEN2Q8NCW0 462 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 FAM110BQ8TC76 370 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 RGMAQ96B86 450 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 TMLHEQ9NVH6 421 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 CNTN3Q9P232 1028 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 EIF3KQ9UBQ5 218 aaKnown RBP11.3□□□□□ -0.6
VCL-202ENST00000372755 COL5A2P05997 1499 aaPredicted RBP11.3□□□□□ -0.6
VCL-202ENST00000372755 EFCAB9A8MZ26 197 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 MATN2O00339 956 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 WNT9AO14904 365 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 IFNA21P01568 189 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 HSD11B1P28845 292 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 GRK5P34947 590 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 HERVK_113P63132 956 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 NFKB2Q00653 900 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 MADCAM1Q13477 382 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 ARFRP1Q13795 201 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 HERC3Q15034 1050 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 INAVAQ3KP66 663 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 RBM48Q5RL73 367 aaKnown RBP11.3□□□□□ -0.6
VCL-202ENST00000372755 LINC00471Q8N535 108 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 HAPLN3Q96S86 360 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 ERVK-6Q9BXR3 956 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 SLC22A4Q9H015 551 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 WDR26Q9H7D7 661 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 PNO1Q9NRX1 252 aaKnown RBP11.3□□□□□ -0.6
VCL-202ENST00000372755 ABCB8Q9NUT2 735 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 COMMD3Q9UBI1 195 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 AGLP35573 1532 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 C9J4A7 227 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 NOBOXO60393 691 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 C8AP07357 584 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 ZBTB48P10074 688 aaPredicted RBP11.3□□□□□ -0.6
VCL-202ENST00000372755 MYCLP1P12525 358 aaPredicted RBP11.3□□□□□ -0.6
VCL-202ENST00000372755 MTPNP58546 118 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms