RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 DNAJC22Q8N4W6 341 aa18.2■□□□□ 0.5
TMEM53-201ENST00000372235 MCUQ8NE86 351 aa18.2■□□□□ 0.5
TMEM53-201ENST00000372235 FLVCR1-AS1Q8TAF5 88 aa18.2■□□□□ 0.5
TMEM53-201ENST00000372235 GABPB2Q8TAK5 448 aaPredicted RBP18.2■□□□□ 0.5
TMEM53-201ENST00000372235 ADAMTS17Q8TE56 1095 aa18.2■□□□□ 0.5
TMEM53-201ENST00000372235 MFSD3Q96ES6 412 aa18.2■□□□□ 0.5
TMEM53-201ENST00000372235 FAM60AQ9NP50 221 aa18.2■□□□□ 0.5
TMEM53-201ENST00000372235 INTS10Q9NVR2 710 aaKnown RBP18.2■□□□□ 0.5
TMEM53-201ENST00000372235 SYBUQ9NX95 663 aa18.2■□□□□ 0.5
TMEM53-201ENST00000372235 MARCH4Q9P2E8 410 aaPredicted RBP18.2■□□□□ 0.5
TMEM53-201ENST00000372235 ZNF451Q9Y4E5 1061 aa18.2■□□□□ 0.5
TMEM53-201ENST00000372235 HELZ2Q9BYK8 2649 aaKnown RBP18.19■□□□□ 0.5
TMEM53-201ENST00000372235 SDR42E2A6NKP2 422 aa18.19■□□□□ 0.5
TMEM53-201ENST00000372235 KCNJ11Q14654 390 aa18.19■□□□□ 0.5
TMEM53-201ENST00000372235 SF1Q15637 639 aaKnown RBP18.19■□□□□ 0.5
TMEM53-201ENST00000372235 FAM198BQ6UWH4 519 aa18.19■□□□□ 0.5
TMEM53-201ENST00000372235 TRIM73Q86UV7 250 aa18.19■□□□□ 0.5
TMEM53-201ENST00000372235 VRK3Q8IV63 474 aa18.19■□□□□ 0.5
TMEM53-201ENST00000372235 KRT222Q8N1A0 295 aa18.19■□□□□ 0.5
TMEM53-201ENST00000372235 HMGCLL1Q8TB92 370 aa18.19■□□□□ 0.5
TMEM53-201ENST00000372235 FER1L6-AS2Q96M78 137 aa18.19■□□□□ 0.5
TMEM53-201ENST00000372235 RUFY1Q96T51 708 aa18.19■□□□□ 0.5
TMEM53-201ENST00000372235 FAM114A2Q9NRY5 505 aa18.19■□□□□ 0.5
TMEM53-201ENST00000372235 EURLQ9NYK6 297 aa18.19■□□□□ 0.5
TMEM53-201ENST00000372235 IL1RAPL1Q9NZN1 696 aa18.19■□□□□ 0.5
TMEM53-201ENST00000372235 SPATA7Q9P0W8 599 aa18.19■□□□□ 0.5
TMEM53-201ENST00000372235 IFT80Q9P2H3 777 aaPredicted RBP18.19■□□□□ 0.5
TMEM53-201ENST00000372235 PLAGL1Q9UM63 463 aa18.19■□□□□ 0.5
TMEM53-201ENST00000372235 FAM237BA0A1B0GVD1 139 aa18.18■□□□□ 0.5
TMEM53-201ENST00000372235 ARGFXA6NJG6 315 aa18.18■□□□□ 0.5
TMEM53-201ENST00000372235 ZNF839A8K0R7 811 aa18.18■□□□□ 0.5
TMEM53-201ENST00000372235 E5RI56 91 aa18.18■□□□□ 0.5
TMEM53-201ENST00000372235 PGRMC1O00264 195 aaKnown RBP18.18■□□□□ 0.5
TMEM53-201ENST00000372235 PEX12O00623 359 aa18.18■□□□□ 0.5
TMEM53-201ENST00000372235 C1orf105O95561 183 aa18.18■□□□□ 0.5
TMEM53-201ENST00000372235 CAPN1P07384 714 aa18.18■□□□□ 0.5
TMEM53-201ENST00000372235 CHRM3P20309 590 aa18.18■□□□□ 0.5
TMEM53-201ENST00000372235 HSD17B2P37059 387 aa18.18■□□□□ 0.5
TMEM53-201ENST00000372235 FOLR3P41439 243 aa18.18■□□□□ 0.5
TMEM53-201ENST00000372235 GABRA4P48169 554 aa18.18■□□□□ 0.5
TMEM53-201ENST00000372235 ZIC1Q15915 447 aa18.18■□□□□ 0.5
TMEM53-201ENST00000372235 CYP1B1Q16678 543 aa18.18■□□□□ 0.5
TMEM53-201ENST00000372235 PTCHD3Q3KNS1 767 aa18.18■□□□□ 0.5
TMEM53-201ENST00000372235 TTLL9Q3SXZ7 439 aa18.18■□□□□ 0.5
TMEM53-201ENST00000372235 PAPD7Q5XG87 772 aaKnown RBP18.18■□□□□ 0.5
TMEM53-201ENST00000372235 ZNF385CQ66K41 422 aaPredicted RBP18.18■□□□□ 0.5
TMEM53-201ENST00000372235 CCDC137Q6PK04 289 aaKnown RBP18.18■□□□□ 0.5
TMEM53-201ENST00000372235 MICALCLQ6ZW33 695 aa18.18■□□□□ 0.5
TMEM53-201ENST00000372235 ATCAYQ86WG3 371 aa18.18■□□□□ 0.5
TMEM53-201ENST00000372235 CALML6Q8TD86 181 aa18.18■□□□□ 0.5
TMEM53-201ENST00000372235 LPGAT1Q92604 370 aa18.18■□□□□ 0.5
TMEM53-201ENST00000372235 VPS50Q96JG6 964 aa18.18■□□□□ 0.5
TMEM53-201ENST00000372235 MENTQ9BUN1 341 aa18.18■□□□□ 0.5
TMEM53-201ENST00000372235 CCDC68Q9H2F9 335 aa18.18■□□□□ 0.5
TMEM53-201ENST00000372235 MLXIPLQ9NP71 852 aa18.18■□□□□ 0.5
TMEM53-201ENST00000372235 ENAMQ9NRM1 1142 aa18.18■□□□□ 0.5
TMEM53-201ENST00000372235 UTP6Q9NYH9 597 aaKnown RBP18.18■□□□□ 0.5
TMEM53-201ENST00000372235 KLHL42Q9P2K6 505 aa18.18■□□□□ 0.5
TMEM53-201ENST00000372235 H3BMH7 237 aa18.17■□□□□ 0.5
TMEM53-201ENST00000372235 CES2O00748 559 aa18.17■□□□□ 0.5
TMEM53-201ENST00000372235 SRPX2O60687 465 aaPredicted RBP18.17■□□□□ 0.5
TMEM53-201ENST00000372235 ZIC2O95409 532 aaPredicted RBP18.17■□□□□ 0.5
TMEM53-201ENST00000372235 MAGP20916 626 aa18.17■□□□□ 0.5
TMEM53-201ENST00000372235 VARSP26640 1264 aaKnown RBP18.17■□□□□ 0.5
TMEM53-201ENST00000372235 FMO4P31512 558 aa18.17■□□□□ 0.5
TMEM53-201ENST00000372235 PTGIRP43119 386 aa18.17■□□□□ 0.5
TMEM53-201ENST00000372235 CCL11P51671 97 aa18.17■□□□□ 0.5
TMEM53-201ENST00000372235 FOXK1P85037 733 aa18.17■□□□□ 0.5
TMEM53-201ENST00000372235 THOC5Q13769 683 aaKnown RBP18.17■□□□□ 0.5
TMEM53-201ENST00000372235 DHX34Q14147 1143 aaKnown RBP18.17■□□□□ 0.5
TMEM53-201ENST00000372235 GRM7Q14831 915 aa18.17■□□□□ 0.5
TMEM53-201ENST00000372235 TRIP13Q15645 432 aaPredicted RBP18.17■□□□□ 0.5
TMEM53-201ENST00000372235 FAM214AQ32MH5 1076 aa18.17■□□□□ 0.5
TMEM53-201ENST00000372235 MLIPQ5VWP3 458 aa18.17■□□□□ 0.5
TMEM53-201ENST00000372235 LCN10Q6JVE6 187 aa18.17■□□□□ 0.5
TMEM53-201ENST00000372235 NEPROQ6NW34 567 aa18.17■□□□□ 0.5
TMEM53-201ENST00000372235 CILP2Q8IUL8 1156 aa18.17■□□□□ 0.5
TMEM53-201ENST00000372235 MCATQ8IVS2 390 aaKnown RBP18.17■□□□□ 0.5
TMEM53-201ENST00000372235 ZNF655Q8N720 491 aaPredicted RBP18.17■□□□□ 0.5
TMEM53-201ENST00000372235 TTC29Q8NA56 475 aaPredicted RBP18.17■□□□□ 0.5
TMEM53-201ENST00000372235 LINC01555Q8NAE3 123 aa18.17■□□□□ 0.5
TMEM53-201ENST00000372235 LKAAEAR1Q8TD35 194 aa18.17■□□□□ 0.5
TMEM53-201ENST00000372235 BIRC8Q96P09 236 aa18.17■□□□□ 0.5
TMEM53-201ENST00000372235 GBP5Q96PP8 586 aa18.17■□□□□ 0.5
TMEM53-201ENST00000372235 NRTNQ99748 197 aa18.17■□□□□ 0.5
TMEM53-201ENST00000372235 SPRTNQ9H040 489 aaPredicted RBP18.17■□□□□ 0.5
TMEM53-201ENST00000372235 COMMD10Q9Y6G5 202 aa18.17■□□□□ 0.5
TMEM53-201ENST00000372235 FAM169AQ9Y6X4 670 aa18.17■□□□□ 0.5
TMEM53-201ENST00000372235 DPM1O60762 260 aa18.16■□□□□ 0.5
TMEM53-201ENST00000372235 PHF2O75151 1096 aa18.16■□□□□ 0.5
TMEM53-201ENST00000372235 CEACAM4O75871 244 aa18.16■□□□□ 0.5
TMEM53-201ENST00000372235 ALBP02768 609 aa18.16■□□□□ 0.5
TMEM53-201ENST00000372235 ARNTP27540 789 aa18.16■□□□□ 0.5
TMEM53-201ENST00000372235 PEBP1P30086 187 aaKnown RBP18.16■□□□□ 0.5
TMEM53-201ENST00000372235 COILP38432 576 aaPredicted RBP18.16■□□□□ 0.5
TMEM53-201ENST00000372235 FNTAP49354 379 aa18.16■□□□□ 0.5
TMEM53-201ENST00000372235 VPS41P49754 854 aa18.16■□□□□ 0.5
TMEM53-201ENST00000372235 GRB7Q14451 532 aa18.16■□□□□ 0.5
TMEM53-201ENST00000372235 ARHGAP19Q14CB8 494 aa18.16■□□□□ 0.5
TMEM53-201ENST00000372235 DEFB110Q30KQ9 67 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms