RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 ZNF195O14628 629 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 DENRO43583 198 aaKnown RBP10.16□□□□□ -0.78
COL5A1-202ENST00000371820 ITM2AO43736 263 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 USP12O75317 370 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 PIAS1O75925 651 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 CLDN7O95471 211 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 PRLP01236 227 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 CEACAM5P06731 702 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 LYNP07948 512 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 CELA2BP08218 269 aaPredicted RBP10.16□□□□□ -0.78
COL5A1-202ENST00000371820 ERVK-10P10266 1014 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 PNLIPP16233 465 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 STMN1P16949 149 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 GRIA1P42261 906 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 MLLT3P42568 568 aaPredicted RBP10.16□□□□□ -0.78
COL5A1-202ENST00000371820 GNPDA1P46926 289 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 SPINT3P49223 89 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 PCBP4P57723 403 aaKnown RBP10.16□□□□□ -0.78
COL5A1-202ENST00000371820 GABREP78334 506 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 C19orf57Q0VDD7 668 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 TBL3Q12788 808 aaKnown RBP10.16□□□□□ -0.78
COL5A1-202ENST00000371820 EIF3IQ13347 325 aaKnown RBP10.16□□□□□ -0.78
COL5A1-202ENST00000371820 ART3Q13508 389 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 USP10Q14694 798 aaKnown RBP10.16□□□□□ -0.78
COL5A1-202ENST00000371820 TCEA2Q15560 299 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 C14orf28Q4W4Y0 310 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 PERM1Q5SV97 790 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 IRAK1BP1Q5VVH5 260 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 OR52E8Q6IFG1 317 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 OGFOD3Q6PK18 319 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 ZNF248Q8NDW4 579 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 OR52K1Q8NGK4 314 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 LRRN4Q8WUT4 740 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 CCDC74AQ96AQ1 378 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 LRGUKQ96M69 825 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 TMEM74Q96NL1 305 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 OR2M4Q96R27 311 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 SORT1Q99523 831 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 MRPL57Q9BQC6 102 aaKnown RBP10.16□□□□□ -0.78
COL5A1-202ENST00000371820 EBF4Q9BQW3 602 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 EFHD1Q9BUP0 239 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 C20orf27Q9GZN8 174 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 TMEM168Q9H0V1 697 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 FAM83DQ9H4H8 585 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 RMI1Q9H9A7 625 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 POLR1BQ9H9Y6 1135 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 ZFYVE1Q9HBF4 777 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 GLOD4Q9HC38 313 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 MAGEE1Q9HCI5 957 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 PFDN4Q9NQP4 134 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 PNPOQ9NVS9 261 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 MARCOQ9UEW3 520 aaPredicted RBP10.16□□□□□ -0.78
COL5A1-202ENST00000371820 CD84Q9UIB8 345 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 RUVBL2Q9Y230 463 aaKnown RBP10.16□□□□□ -0.78
COL5A1-202ENST00000371820 CDYLQ9Y232 598 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 POMPQ9Y244 141 aa10.16□□□□□ -0.78
COL5A1-202ENST00000371820 CFAP46Q8IYW2 2715 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 CCDC189A1A4V9 331 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 B4DGG1 531 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 G3V2L1 256 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 NUDT21O43809 227 aaKnown RBP10.15□□□□□ -0.78
COL5A1-202ENST00000371820 NDST3O95803 873 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 MMP2P08253 660 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 TFEBP19484 476 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 ME2P23368 584 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 PPARGP37231 505 aaPredicted RBP10.15□□□□□ -0.78
COL5A1-202ENST00000371820 CPA2P48052 419 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 LSSP48449 732 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 DCDC1P59894 354 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 ERVPABLB-1P60509 514 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 CXADRP78310 365 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 TRAP1Q12931 704 aaKnown RBP10.15□□□□□ -0.78
COL5A1-202ENST00000371820 CUL3Q13618 768 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 LRP8Q14114 963 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 MAP7Q14244 749 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 GALNT3Q14435 633 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 PCSK7Q16549 785 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 FAM83EQ2M2I3 478 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 CERCAMQ5T4B2 595 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 AGAP9Q5VTM2 703 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 DOK6Q6PKX4 331 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 IGF2-ASQ6U949 168 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 IZUMO2Q6UXV1 221 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 GALNT13Q8IUC8 556 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 DEFB107AQ8IZN7 70 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 PGAM4Q8N0Y7 254 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 PELI3Q8N2H9 469 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 GPBAR1Q8TDU6 330 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 STYXQ8WUJ0 223 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 NRG4Q8WWG1 115 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 PEX13Q92968 403 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 VPS39Q96JC1 886 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 SCYL1Q96KG9 808 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 GFM1Q96RP9 751 aaKnown RBP10.15□□□□□ -0.78
COL5A1-202ENST00000371820 RANBP9Q96S59 729 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 RIOK2Q9BVS4 552 aaKnown RBP10.15□□□□□ -0.78
COL5A1-202ENST00000371820 MRPL1Q9BYD6 325 aaKnown RBP10.15□□□□□ -0.78
COL5A1-202ENST00000371820 CEP41Q9BYV8 373 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 GPR63Q9BZJ6 419 aa10.15□□□□□ -0.78
COL5A1-202ENST00000371820 STRADBQ9C0K7 418 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms